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883 commits

Author SHA1 Message Date
Ray Speth
ecf4301208 Remove redundant, inaccessible Tortuosity classes 2014-11-07 02:14:59 +00:00
Ray Speth
8b8a95a2ff Deprecate unused stringUtils functions 2014-11-07 02:14:57 +00:00
Ray Speth
a6a10b854c [Reactor] Add damping factor to setState Newton iteration 
This resolves convergence issues in somes cases where the iteration would
oscillate around the true solution.
 2014-11-07 02:14:55 +00:00
Ray Speth
07f8d520ee Improved implementation of parseCompString 
Improvements:

- Tolerate formatting irregularities such as spaces befpre or after the colon
  (e.g. 'H2: 1.0')

- Allow names containing commas and semicolons

- Detect errors such as no value being supplied for the last element (e.g. 'H2')

- Single implementation handles both the case where a list of valid names is
  supplied and when any name is allowed
 2014-11-07 02:14:52 +00:00
Ray Speth
37f71bd912 [Kinetics] Deprecate 'reactants' and 'products' methods 
These methods are rarely used, and they expose a now-unused internal data
structure that isn't even correct for all reactions.
 2014-11-07 02:14:50 +00:00
Ray Speth
b2afb1a7a9 [Kinetics] Handle stoichiometry and reaction order in StoichManagerN 
In the previous implementation, the higher-level classes were making unnecessary
assumptions about the optimizations used in StoichManagerN for reactions with
unity stoichometric coefficients.
 2014-11-01 00:13:49 +00:00
Ray Speth
557ffffc5b [Kinetics] Combine ReactionStoichMgr with class Kinetics 
Class ReactionStoichMgr is now deprecated, as all of its functions were just
pass-throughs between Kinetics and StoichManagerN.
 2014-11-01 00:13:46 +00:00
Ray Speth
f1387be98a Formatting cleanup of importKinetics 2014-11-01 00:13:44 +00:00
Ray Speth
50a08db7c0 [Kinetics] Move some function definitions out of RxnRates.h 
The performance-sensitive update_C and updateRC methods remain in the header
file.
 2014-11-01 00:13:42 +00:00
Ray Speth
06732a6581 [Kinetics] Merge SRI5 and SRI3 implementations 2014-10-30 21:10:12 +00:00
Ray Speth
9c008a753b [Kinetics] Merge Troe3 and Troe4 implementations 2014-10-30 21:10:09 +00:00
Ray Speth
d1295a5249 [Kinetics] Make Falloff class declarations public 2014-10-30 21:10:04 +00:00
Ray Speth
3b71d75ada [Kinetics] Add class BulkKinetics 
This class serves as a common base for GasKinetics and AqueousKinetics,
eliminating most of the redundancy between the two classes.
 2014-10-30 21:09:59 +00:00
Ray Speth
6f0fb5cf8d [Kinetics] Refactor and deprecate installReagents 2014-10-29 23:32:27 +00:00
Ray Speth
a8659c86cc [Kinetics] Removed unnecessary initializations 2014-10-29 23:32:24 +00:00
Ray Speth
3ab37254eb [Kinetics] Move m_rfn and m_rkcn up to Kinetics 2014-10-29 23:32:19 +00:00
Ray Speth
987bb8f115 [Kinetics] Remove unused variable 'm_fwdOrder' 2014-10-29 23:32:16 +00:00
Ray Speth
ba87385c86 [Kinetics] Finish deprecating duplicate "reactionNumber" function 
Remove the private implementations outright.
 2014-10-29 23:32:12 +00:00
Ray Speth
d5262e8bee [Kinetics] Move stoich manager and related functions up to Kinetics 2014-10-29 23:32:07 +00:00
Ray Speth
6287c2c311 [Kinetics] Remove unused m_index member of Kinetics classes 2014-10-22 21:48:19 +00:00
Ray Speth
584c57d569 [Kinetics] move "reaction type" up to Kinetics 2014-10-22 21:48:15 +00:00
Ray Speth
d65dbe3da2 [Kinetics] Move common Kinetics features up to the base class 2014-10-22 21:48:11 +00:00
Ray Speth
e7236df51f Formatting cleanup of InterfaceKinetics 2014-10-22 21:48:09 +00:00
Ray Speth
a208c54d1c Add a version of XML_Node::getChildren with a simpler interface 2014-10-22 21:48:04 +00:00
Ray Speth
7d9a6eeefc Deprecate class SpeciesThermoFactory 2014-10-17 23:44:56 +00:00
Ray Speth
e390beacbe Handle MineralEQ3 adjustment without using ThermoPhase object 2014-10-17 23:44:52 +00:00
Ray Speth
4dd3e1d2bc Use Species objects when adding species from XML 2014-10-17 23:44:47 +00:00
Ray Speth
11caddea1e Implement factory functions for SpeciesThermoInterpType 2014-10-17 23:44:42 +00:00
Ray Speth
5bc4a12e2e Add options for handling Species containing undefined elements 2014-10-17 23:44:37 +00:00
Ray Speth
26b6f190f3 Introduce class Species 2014-10-17 23:44:31 +00:00
Ray Speth
53abe2ee9a [Thermo] Always use GeneralSpeciesThermo 
The specialized SpeciesThermo derived types offer no performance benefit now
that GeneralSpeciesThermo manages calculation of the temperature terms
efficiently.
 2014-10-15 02:03:06 +00:00
Ray Speth
6c3fc200b6 Clean up implementation of GeneralSpeciesThermo 2014-10-15 02:03:01 +00:00
Ray Speth
5166336a32 [Thermo] Add continuity check to NasaPoly2 2014-10-15 02:02:58 +00:00
Ray Speth
0da3424249 [Thermo] Improve performance of GeneralSpeciesThermo 
Compute the temperature polynomial only once for each parameterization type. By
doing this, we essentially get performance parity with the specialized
SpeciesThermo types (NasaThermo, ShomateThermo, SimpleThermo).
 2014-10-15 02:02:55 +00:00
Ray Speth
227b342d1b Fix Nasa9PolyMultiTempRegion::updateProperties to use the correct polynomial 2014-10-15 02:02:53 +00:00
Ray Speth
40470c46af [Thermo] Separate temperature polynomial calculation from property update 2014-10-15 02:02:48 +00:00
Ray Speth
930bcceddc Clean up formatting of SpeciesThermoInterpType 2014-10-15 02:02:46 +00:00
Harry Moffat
e5c3377dd2 Changed the name of a few internal variables. 2014-10-10 01:40:40 +00:00
Ray Speth
044235c065 [SCons] Remove unnecessary uses of pjoin 2014-10-08 16:54:49 +00:00
Ray Speth
43f022384c Add version of installVPThermoForSpecies without unused arguments 
Deprecate the old version of SpeciesThermoFactory::installVPThermoForSpecies.
 2014-10-08 16:54:44 +00:00
Ray Speth
c4a5f2667f Remove CTML_VERSION macros 
CTML_VERSION_1_4_1 was never used, and defining CTML_VERSION_1_4 broke reading
values written by the addInteger and addFloat functions with the getInteger and
getFloat functions, respectively.
 2014-10-08 16:54:42 +00:00
Ray Speth
55fab6ca83 Deprecate unused return value of importPhase 2014-10-03 22:15:08 +00:00
Ray Speth
a5149ae665 [1D] Reduce default minimum grid size 
The new value is OK even for high pressure flames - it is less than the mean
free path in air at 100 bar and 300 K.
 2014-10-03 22:15:03 +00:00
Ray Speth
4910b1bc1c Fix compilation with Visual Studio 2013 
Fixes regression introduced in r3125.

Resolves Issue 240.
 2014-10-03 16:48:21 +00:00
Ray Speth
787c90adeb [Thermo] Make header files for SpeciesThermoInterpType descendants public 2014-10-03 01:45:58 +00:00
Ray Speth
5b1b08849c Additional uses for getValue with default value 2014-10-03 01:45:54 +00:00
Ray Speth
a74fda8ad2 Introduce 'getValue' to avoid making std::map members mutable 2014-10-03 01:45:49 +00:00
Ray Speth
91f3a2b073 Fix statements that called the assignment operator twice 2014-10-03 01:45:41 +00:00
Ray Speth
afe9ccb03e Remove unnecessary checks before deleting pointers 2014-10-01 17:52:23 +00:00
Ray Speth
4baccc732c [Thermo] Simplify interface for adding elements to a Phase 
Phase::addElements(string name, ...) is the single entry point for adding
elements. It always perform the uniqueness check, and can do the extra
additional work required to add elements to a phase that already has species,
removing the need for "freezing" the phase's elements. Parsing the XML tree for
elements is now handled in "installElements". The variant element-adding methods
are deprecated.
 2014-09-27 00:09:05 +00:00