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Author SHA1 Message Date
Bryan W. Weber
d84f482400 [Docs] Fix small typos in Compiling docs 2017-01-12 13:43:39 -05:00
Bryan W. Weber
cf5e45d697 [Docs] Remove instruction to install Sundials via system installer 
The source of Sundials is built automatically, so it isn't necessary to install it
separately.
 2017-01-12 13:43:39 -05:00
Bryan W. Weber
bffd4d2de1 [Docs] Rewrite Linux compiling requirements section 
Reframe in terms of requirements for each distro. Add OpenSUSE.
 2017-01-12 13:43:39 -05:00
Bryan W. Weber
983b2cc015 [Matlab/Doc] Fix typos in docs for some ThermoPhase getters 
These actually return scalars, although the docstrings
said they returned vectors
 2017-01-03 21:57:06 -05:00
Steven DeCaluwe
d655cf0eae Correcting RedlichKwongMFTP::getActivityConcentrations 
Implementing correct 'activity concentrations' routine, based on
fugacity coefficients, and cleaning up extraneous comments, whitespace, etc.
 2017-01-02 09:03:07 -05:00
Ray Speth
1593c2fc5f [Doc] Update Homebrew installation instructions 
Homebrew installation does not need pip-installed Cython.

External Sundials is automatically disabled when using Matlab, and does not
incur any penalties.
 2016-12-30 13:26:50 -05:00
Ray Speth
e7923cedbb [SCons] Remove unnecessary configuration tests 2016-12-30 13:26:50 -05:00
Ray Speth
4669b9cf5a Fix miscellaneous spelling errors 2016-12-30 13:26:50 -05:00
Bryan W. Weber
3014b7af89 [SCons] Fail the numpy check more gracefully 
An import error with NumPy caused the build to fail when it shouldn't.
This fixes that and fixes #414. Also implement a minimum version
warning check with NumPy. The warning message is printed if the NumPy
version that's found is less than the version we test with.
 2016-12-30 13:23:54 -05:00
Bryan W. Weber
04b5498a24 [SCons] Refactor Cython check to error if min_version not met 
Previously, the warning message would print, but the full package would be built anyways.
This caused errors later in the build process that this check is supposed to handle.
 2016-12-30 13:23:54 -05:00
Bryan W. Weber
c7555f1eae [SCons] Deprecate the new Python interface option 2016-12-30 13:23:54 -05:00
Ray Speth
d9ff992817 Fix temporary cti filename for MinGW 2016-12-29 22:06:27 -05:00
Santosh Shanbhogue
3593fad14a Fix ct2ctml when string passed as 'source' argument 
Make ct2ctml create a temp cti file for a large source argument

Fixes #416
 2016-12-29 22:06:27 -05:00
Ray Speth
e515afd9e1 [Doc] Fix Ubuntu build dependencies for Python 3 module 
Cython for Python 2 is used (under SCons) to generate the C++ code for the
extension module, which is then compiled separately for Python 2 and/or Python
3.
 2016-12-23 20:04:46 -05:00
Santosh Shanbhogue
46009e4a95 Fix cantera.pc to pass correct compiler options 2016-12-21 23:42:31 -05:00
Ray Speth
268585b896 [Doc] Describe usage of ck2cti as a command-line module 2016-12-21 21:23:50 -05:00
Ray Speth
d0a5003eac [SCons] Fix compiler flags included in cantera.pc 
Missing '-std=c++0x' or equivalent would lead to compilation errors.
 2016-12-21 21:23:50 -05:00
EmilAtz
1e08d7499c Deprecation of MatLab importPhase function 
Addition of comments in importPhase to warn for function deprecation.
 2016-12-21 15:39:54 -05:00
EmilAtz
5b2406470c Adjustment of importPhase to Solution in MatLab documentation 
Searched for importPhase and updated respective locations to Solution.
Modified wording around changes.
 2016-12-21 15:39:54 -05:00
EmilAtz
d707e059e0 [matlab/doc] Update importPhase to Solution for matlab input-tutorial 
Updated to importPhase to Solution to match current function usage
 2016-12-21 15:39:54 -05:00
Ray Speth
2284bc9186 [Transport] Fix transport geometry flag check for charged species 
Electrons should not be counted when determining the number of atoms in a
molecule and the corresponding allowable molecular geometries.
 2016-12-17 19:09:37 -05:00
Ray Speth
b20c0c6699 [Doc] Fix depth of ck2cti docs 2016-12-10 19:23:21 -05:00
Ray Speth
733ec18601 [CI] Upload coverage data to codecov.io 2016-12-10 18:44:30 -05:00
Ray Speth
fa699be425 [SCons] Clang can also generate coverage info 2016-12-10 18:44:30 -05:00
Bryan W. Weber
b495fe8913 [SCons] Fix missing comma in finding 3to2 on non-Windows 2016-12-09 20:13:22 -05:00
Bryan W. Weber
9f198f028e [CI] Add Python 3 to build 2016-12-09 20:13:22 -05:00
Bryan W. Weber
ca6f8f4fd1 [CI] Parallel build on Windows requires pywin32 2016-12-09 20:13:22 -05:00
Bryan W. Weber
29e935c1d0 [CI] Add 3to2 and VERBOSE options 2016-12-09 20:13:22 -05:00
Bryan W. Weber
2024d0f08a [SCons] Fix calling 3to2 on Windows with conda 3to2 package 
Fixes #408
 2016-12-09 20:13:22 -05:00
Bryan W. Weber
086e640e46 [SCons] Use subprocess.check_output in getCommandOutput 2016-12-09 20:13:22 -05:00
Santosh Shanbhogue
d1df40af87 Separate transport data from comments in parseTransportData 2016-12-09 19:59:52 -05:00
Santosh Shanbhogue
3f382e2590 Add test to catch superflous entries in a tranport file 2016-12-09 19:59:52 -05:00
Santosh Shanbhogue
06578612eb Identify species with bad transport entries 2016-12-09 19:59:52 -05:00
Bryan W. Weber
c7db81f33c [Doc] Document the ReactorSurface class in Python 
Fixes #407
 2016-12-09 19:51:46 -05:00
arghdos
84e6775ee3 remove special treatment of falloff #'s, resolves #404 2016-12-06 21:30:20 -05:00
Santosh Shanbhogue
08b14b24ed [Doc] Add more links to Jupyter notebooks 2016-12-03 13:24:09 -05:00
Ray Speth
730107cdba [CI] Return exit code from 'scons test' to make Appveyor status correct 
Resolves #382
 2016-11-29 22:05:51 -05:00
Ray Speth
4c1ab0c49d [CI] Fix errors upgrading pip in-place on Appveyor 2016-11-29 22:04:55 -05:00
Ray Speth
1b4ea04277 [Doc] Update prereqs for using Windows binaries 2016-11-29 20:36:50 -05:00
Ray Speth
8ee7d432e1 [Doc] Warn OS X users about out-of-date system Numpy 2016-11-29 20:36:50 -05:00
Ray Speth
c6412a56a4 [Doc] Add DOI reserved for 2.3.0 release 2016-11-29 20:36:50 -05:00
Ray Speth
4cc8d72e10 [Doc] Update OS/Python versions for which binary installers are provided 2016-11-29 20:36:50 -05:00
Ray Speth
95e1ee49dc Bump version to 2.3.0b1 2016-11-29 20:36:50 -05:00
Ray Speth
89e729f6b8 [Doc] Update versions of supported dependencies 2016-11-29 20:36:50 -05:00
Kyle Niemeyer
dcebc5f01f [Doc] Fixed conda link in README 
Original link in README for conda (https://anaconda.org/cantera/repo?type=conda&label=main) seems to be broken, so replaced with new link (https://anaconda.org/Cantera/cantera).
 2016-11-29 09:53:35 -05:00
Bryan W. Weber
4829310f11 Add messages to the assertion statements in thermo.pyx 
Fixes #335
 2016-11-27 23:28:21 -05:00
Ray Speth
0787e4194e [Base] Fix parsing composition strings when last name contains a colon 
If the last species name in a composition string contained a colon, it would not
be parsed correctly.
 2016-11-27 17:41:37 -05:00
Ray Speth
aa4d07f543 [Thermo] Allow discontinuous thermo warnings to be suppressed 
Resolves #354
 2016-11-26 00:57:23 -05:00
Ray Speth
469cc63d99 Remove unused code from ReactionPathBuilder 2016-11-25 23:42:01 -05:00
Ray Speth
d7819af947 [SCons] Make versioning of cantera_shared optional 
Also, disable by default on MinGW to work around a SCons bug
 2016-11-25 23:42:00 -05:00