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Author SHA1 Message Date
Ray Speth
c865843d8a [Cython] Fix compilation issue when using Clang 
Cherry-pick of trunk r2663.
 2014-01-23 02:13:51 +00:00
Ray Speth
2628cb760c [SCons] Add Boost libraries when building the shared library 
Cherry-pick of trunk r2670.
 2014-01-23 02:13:46 +00:00
Ray Speth
2d7d82d633 [SCons] Install Python 3 module to stage directory 
Cherry-pick of trunk r2671.
 2014-01-23 02:13:40 +00:00
Ray Speth
5109d0d5a4 [Test] Update gtest to 1.7.0 
Cherry-pick of trunk r2680.
 2014-01-23 02:12:44 +00:00
Ray Speth
9f156c04fc [Thermo] Make modification of discontinuous NASA polynomials optional 
Adding the attribute allow_discontinuities="true" to a phase's
'thermo' node (CTML) or adding 'allow_discontinuous_thermo' to a
phase's 'options' argument (CTI) will disable the automatic adjustment
of the provided polynomials so that enthalpy and entropy are
continuous at the midpoint temperature.

Cherry-pick of trunk r2590.
 2014-01-23 02:12:36 +00:00
Ray Speth
5386d6b304 [ctml] Fix constructor for stoichiometric_solid phase 
Error introduced in r2579
 2013-12-06 23:45:22 +00:00
Ray Speth
81cf00260d [ck2cti] Add support for species names containing '+' and '=' 2013-12-06 23:15:24 +00:00
Ray Speth
44181d5edf [ck2cti/Test] Eliminate confusing messages from expected errors 
Suppress error messages from tests of ck2cti that use bad input to
test that input validation is working correctly.
 2013-12-06 23:15:21 +00:00
Ray Speth
c9b4d3dbe8 [ck2cti] Add support for truncated section header names 
Accept truncated section names such as 'REAC' for 'REACTIONS' and
'ELEM' for 'ELEMENTS'.
 2013-12-06 23:15:18 +00:00
Ray Speth
ff842a1a08 [Cython] Direct log output to sys.stdout 
This fixes the problem of some output (notably from the 1D solver)
going to std::cout when that is not the primary output location,
e.g. when using IDLE or the IPython QtConsole.
 2013-12-06 23:15:14 +00:00
Ray Speth
3f92b77f5a [Thermo] Fix printed labels in phase report when show_thermo=False 2013-12-06 23:15:11 +00:00
Ray Speth
58a4183e55 [Matlab] Remove broken ck2ctml function 
There are three problems with this function. It does not work, since
it calls ctmethods with the wrong number of arguments. Even if that
were fixed, it wouldn't do what it claims, as the method it calls
generates a CTI file, not an XML file. Finally, it is redundant, as
the 'ck2cti' function can be used for generating the CTI file, and the
CTI to XML conversion is handled automatically when importing the
phase.

Therefore, this function is being removed.
 2013-12-06 23:15:08 +00:00
Ray Speth
7ce65f45d8 [Python/Test] Run tests that were being accidentally ignored 2013-12-05 20:54:11 +00:00
Ray Speth
a8111887bf [CTI] Add optional 'note' field to Phase definitions 
The note field is preserved when converting to XML, and can be used to
store extra information used by applications other than Cantera.
 2013-12-05 20:54:08 +00:00
Ray Speth
c7d69ac863 [Cython] Expose global 'appdelete' method 
Occasionally useful for debugging memory leaks
 2013-12-05 20:54:06 +00:00
Ray Speth
b914d59fbd [Docs] Fix typos in a few equations 2013-12-05 20:54:03 +00:00
Ray Speth
bec6e97eb4 [Matlab/Samples] Fix tolerances on flame example 2013-12-05 20:54:01 +00:00
Ray Speth
cd572403df Fix issues with pure fluids near temperature limits 
Fixes Issue 186.
 2013-11-12 23:44:51 +00:00
Ray Speth
a7bd7c6a7a [Cython] Add 'atomic_weight' method and 'atomic_weights' property 
Resolves Issue 185.
 2013-11-12 23:44:46 +00:00
Ray Speth
cf429ac374 Fix CXX flags for VS2012 
Resolves Issue 184.
 2013-11-12 23:44:42 +00:00
Ray Speth
d76ae30e86 [Cython/Doc] Migration guide covers transport model and Soret effect 2013-11-03 21:06:54 +00:00
Ray Speth
3a0c370550 [Matlab] Fix 'thermalConductivity' method 2013-11-03 20:46:38 +00:00
Ray Speth
957c88fcff Bump version to 2.1.0 2013-10-24 02:40:14 +00:00
Ray Speth
be1573e85e [SCons] Fix undefined build variable when building MSI 2013-10-24 02:40:12 +00:00
Ray Speth
904e3e66e9 [ck2cti] Accept reaction units declared in either order 
That is, energy followed by quantity or quantity followed by energy.
 2013-10-21 22:13:00 +00:00
Ray Speth
c885a88817 Use fully qualified names for isnan, isinf, and finite 
Specify the versions in the global namespace, to avoid ambiguity
between these and the versions in namespace std that are available in
C++11.
 2013-10-21 22:12:57 +00:00
Ray Speth
94f1b35b79 [ck2cti] Partial support for scientific notation in stoichiometric coefficients 
This won't work for positive exponents, because the '+' will still be
interpreted as a delimiter between terms of the reaction expression.
 2013-10-21 01:55:18 +00:00
Ray Speth
6d5b7999de [SCons] Use specified 'python_compiler' to link Python module 
Fixes Issue 179.
 2013-10-15 17:06:35 +00:00
Ray Speth
f871dd8cf0 [SCons] Add 'python_compiler' option for Cython module compilation 2013-10-15 14:59:31 +00:00
Ray Speth
335e8fcd07 [Samples] Fix missing includes in C++ sample programs 2013-10-07 15:17:28 +00:00
Ray Speth
584392d856 [SCons] Fix linking boost_thread in more places 2013-09-30 16:02:39 +00:00
Ray Speth
c028f4cc5c [SCons] Link boost_thread when building cti2ctml 
Fixes compilation errors with some versions of Boost.
 2013-09-30 01:54:18 +00:00
Ray Speth
2de0ae6350 [SCons/Cython] Fix library_dirs to include BLAS/LAPACK directory 2013-09-30 01:54:12 +00:00
Ray Speth
ddb8bf8eb8 [OneD] Make StFlow::componentIndex virtual 2013-09-30 01:54:06 +00:00
Ray Speth
8498123689 [ck2cti] Show line number for some parsing errors 2013-09-30 01:54:00 +00:00
Ray Speth
f95bc8fb43 [Equil] Avoid floating point overflow from pressure term 
Since computing the residual norm effectively requires p**2, the
correct limit to avoid an overflow is sqrt(DBL_MAX), or roughly
exp(300).

This change fixes crashes due to SIGFPE in cases where floating point
exceptions have been enabled, and also fixes a few cases where the
solver did not previously converge.
 2013-09-30 01:53:54 +00:00
Ray Speth
2ac98393bd [Equil] Remove a calculation with an unused result 2013-09-30 01:53:48 +00:00
Ray Speth
a6f4c111e7 [Cython] Add declarations for free functions to _cantera.pxd 2013-09-30 01:53:40 +00:00
Ray Speth
0458eb736f [Cython] Add __init__.pxd to allow 'from cantera cimport ...' 2013-09-28 18:18:23 +00:00
Ray Speth
a6ce399374 [Cython] Move extra Cython-related headers to main include directory 2013-09-28 18:18:12 +00:00
Ray Speth
332569114e [Cython] Install headers needed for derived Cython modules 2013-09-25 23:05:21 +00:00
Ray Speth
7520170f30 [Cython] Improve support for building derived Cython modules 
The .pxd file now contains declarations for all of the cdef classes,
and is installed with the module.
 2013-09-25 22:57:36 +00:00
Ray Speth
55ece82319 [clib] Fix bounds check on getMolecularWeights 
The incorrect bounds check here caused problems with phases where
there were more elements than species.

Fixes Issue 173.
 2013-09-19 14:49:09 +00:00
Ray Speth
dab827d763 [ck2cti] Make permissive mode default when run from Matlab or C++ 2013-09-12 16:04:13 +00:00
Ray Speth
8a58b12698 [ck2cti] Fix to work with Cython module when called from Matlab or C++ 2013-09-12 16:04:04 +00:00
Ray Speth
721f0266be [SCons] Fix some dependency issues for building "ctpath.m" 2013-09-06 20:34:18 +00:00
Ray Speth
7683677cac Bump version to 2.1.0b3 2013-09-01 00:33:55 +00:00
Ray Speth
b0635fe748 [SCons] Fix compilation of Python 3 module when PYTHONHOME is set 2013-09-01 00:33:49 +00:00
Ray Speth
9f90edc313 [SCons] Update version information for Windows installer 2013-09-01 00:33:43 +00:00
Ray Speth
fc878f09fd [SCons] Include Sundials library and header files in Windows installer 2013-09-01 00:33:37 +00:00