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Author SHA1 Message Date
Ray Speth
8a5bad1e70 Eliminate lowercase 'l' as a variable name 2015-11-13 21:38:43 -05:00
Ray Speth
03db1d3942 [SCons] Fix installation location for Python module location on OS X 
Fixes #296
 2015-11-13 20:51:16 -05:00
Ray Speth
48c6c6b8ad [Python] Fix full-state (e.g. TPX) properties of PureFluid 
The implementations which come from ThermoPhase expect "X" to mean mole
fractions, but for PureFluid "X" means vapor fraction. No setter is provided
since all three properties cannot be specified simultaneously.

Resolves #307
 2015-11-12 18:20:31 -05:00
Ray Speth
f5ff849b47 Replace std::copy with simpler direct assignment where possible 2015-11-12 17:35:30 -05:00
Ray Speth
69eeb20283 Remove duplicate check for thermo node 2015-11-12 15:50:31 -05:00
Ray Speth
f79419cc49 Remove abandoned header file 'solvers.h' 2015-11-12 15:40:50 -05:00
Ray Speth
f6e2f0db73 Remove accidentally-added header file 2015-11-12 15:39:46 -05:00
Ray Speth
5e69a9949a Use ThermoPhase::RT() where convenient 2015-11-12 15:36:17 -05:00
Ray Speth
0d0c96257b [Thermo] Remove unnecessary override of getChemPotentials_RT 2015-11-12 15:15:48 -05:00
Ray Speth
f6d19ccd59 [Thermo] Remove unnecessary overrides of VPStandardStateTP methods 
setPressure, setTemperature, and setState_TP are all implemented generally in
VPStandardStateTP. The specialization in child classes is always handled in
calcDensity().
 2015-11-12 15:04:45 -05:00
Ray Speth
a9379e6f71 [Thermo] Remove unimplemented versions of setToEquilState 2015-11-12 12:42:46 -05:00
Ray Speth
ac9dfa055c [Thermo] Synchronize Mixture/Multiphase state before printing report 
Do not assume that the states of the individual ThermoPhase objects still
correspond to the state of the mixture object. See #306.
 2015-11-12 12:42:35 -05:00
Ray Speth
66a3b5b48a Remove unnecessary and bogus 'inline' declarations 2015-11-12 12:22:09 -05:00
Ray Speth
94185c7fbd Miscellaneous Doxygen doc and comment cleanup 2015-11-12 12:22:09 -05:00
Ray Speth
0540cf26d0 Clean up Doxygen docs and comments in Reactor classes 2015-11-12 11:41:34 -05:00
Ray Speth
34ff39e3df Clean up Doxygen docs and comments in OneD classes 2015-11-12 11:41:34 -05:00
Ray Speth
75d9ef93c5 Clean up Doxygen docs and comments for numerics classes 2015-11-12 11:41:34 -05:00
Ray Speth
0c8bf1fd08 Clean up Doxygen docs and comments for Transport classes 2015-11-12 11:41:34 -05:00
Ray Speth
fe4035647f Clean up remaining Thermo comments 2015-11-12 11:41:34 -05:00
Ray Speth
f8b12adef4 Clean up comments in 'base' source and header files 2015-11-09 19:35:52 -05:00
Ray Speth
5a0a6b855c Clean up Doxygen comments in VPSSMgr and descendants 2015-11-09 17:59:22 -05:00
Ray Speth
cd1f1fd5ac [Doc] Clean up Doxygen documentation for ThermoPhase classes 
Remove redundant documentation from overloaded methods which does not add any
additional information.

Reformat to to make indentation and line lengths more consistent.
 2015-11-09 17:59:22 -05:00
Ray Speth
78b471fbf9 Clean up doxygen comments for SpeciesThermoInterpType classes 2015-11-09 17:59:22 -05:00
Ray Speth
75b0c71044 Clean up comments in Kinetics 2015-11-09 17:59:22 -05:00
Ray Speth
5bf3b0fc67 Clean up comments in other equilibrium-related classes 2015-11-09 17:59:22 -05:00
Ray Speth
618c485c55 Clean up comments in VCS equilibrium solver 2015-11-09 17:34:46 -05:00
Ray Speth
4382ae6c85 Clean up comments in Thermo class source files 2015-11-09 17:34:46 -05:00
Steven DeCaluwe
14864e840b Extend NoNorm option for setCoverages to the Matlab toolbox 
Because normalizing the species coverages leads to incorrect Jacobian
calculations, it is sometimes necessary to not normalize the coverages.
As for bulk species mass/mole fractions, this option is currently only
available when passing the coverages as a vector (i.e., not available
for string identifiers).
 2015-11-07 21:14:03 -05:00
Ray Speth
70fe821c19 Deprecate FuncEval::getInitialConditions and related functions 2015-11-06 14:40:48 -05:00
Thomas Fiala
de133f1a3d [Reactor] Divide residuals by sqrt(n_vars) in advance_to_steady_state 2015-11-03 15:46:07 -05:00
Thomas Fiala
304364c203 [Reactor] Add documentation for advance_to_steady_state 
Also, update tutorials to use this feature.
 2015-11-03 15:46:07 -05:00
Thomas Fiala
57e3ee8c1a [Reactor] Implement the Cython function advance_to_steady_state 
Resolves #95
Resolves #303
 2015-11-03 15:41:58 -05:00
Thomas Fiala
16ab7dff51 [Reactor] Implement functions getState for reactors and reactor networks 
These are simpler forms of getInitialConditions.
 2015-11-03 14:34:28 -05:00
Ray Speth
592a40a1de [SCons] Remove unused configuration options 2015-10-29 22:26:52 -04:00
Ray Speth
c983d730a6 [SCons] Remove 'include/cantera/ext' when running 'scons clean' 2015-10-29 12:27:47 -04:00
Ray Speth
84566a3a7d [SCons] Fix incorrect directory created in build tree 
The 'Mkdir' command was creating a (literal) '#include' directory, rather than
taking the '#' to mean the top of the source tree. The 'Mkdir' command is
unnecessary anyway, since the 'Copy' command will create the necessary
subdirectory.

Fixes #304.
 2015-10-29 12:27:47 -04:00
Bryan W. Weber
afde0a7b52 [Doc] Remove old F77 and F90 SCons options from Intel instructions 2015-10-28 15:33:13 -04:00
Bryan W. Weber
d4fb85d4c3 [Doc] Clarify cloning instructions 
Clarify the instructions on how to clone the repository and which tags or branches should be checked out to get certain releases of the software.
 2015-10-28 15:31:33 -04:00
Bryan W. Weber
b395c68236 [SCons] Fix Cantera.mak cannot be written if extra_inc_dirs or extra_lib_dirs is specified 2015-10-28 12:55:23 -04:00
Bryan W. Weber
6cca4cf55c [Doc] Recommend to use pip to install optional Python packages on Ubuntu 2015-10-26 10:32:31 -04:00
imitrichev
f7a0e14f3e Remove unused field m_logA from class SurfaceArrhenius 2015-10-25 15:41:59 -04:00
imitrichev
40e09043bc Added methods to InterfaceKinetics to get effective rate parameters 
Effective rate parameters are used in SurfaceArrhenius reactions.

Resolves #297.
 2015-10-25 15:41:31 -04:00
Ivan Mitrichev
02fc127c13 Cython minimum version is 0.19 
Also, setuptools is required to build/install the python module.

Resolves #302.
 2015-10-25 14:15:45 -04:00
Bryan W. Weber
2e79a0978e [Doc] Update Homebrew install instructions. 
Update the Homebrew install instructions with a recommendation on how to install the Matlab toolbox and add additional options that are supported during the install process.
 2015-10-25 09:15:31 -04:00
Ray Speth
f910f8c3ee Bump development version to 2.3.0a1 2015-10-24 20:21:32 -04:00
Ray Speth
02ee03ffb2 [Doc] Mention IPython and Matplotlib in installation instructions 2015-10-24 17:47:49 -04:00
Ray Speth
92311f0b67 [Doc] Mention '--with-python3' option for Homebrew installer 2015-10-24 17:47:49 -04:00
Bryan W. Weber
eee1de7368 Merge pull request #300 from bryanwweber/fix-matlab-purefluid-functions 
Fix Matlab PureFluid functions and documentation
 2015-10-24 15:16:40 -04:00
Bryan W. Weber
0be9e7eef7 [Matlab] Fix spacing in private functions 2015-10-24 08:05:52 -04:00
Bryan W. Weber
0b5c97ad4f [Doc] Correct docs for setState_*sat in Matlab 
Correct the documentation to clarify that a vector must be passed in to
these functions, not a single value.
 2015-10-24 08:05:45 -04:00