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Author SHA1 Message Date
Ray Speth
70fe821c19 Deprecate FuncEval::getInitialConditions and related functions 2015-11-06 14:40:48 -05:00
Thomas Fiala
de133f1a3d [Reactor] Divide residuals by sqrt(n_vars) in advance_to_steady_state 2015-11-03 15:46:07 -05:00
Thomas Fiala
304364c203 [Reactor] Add documentation for advance_to_steady_state 
Also, update tutorials to use this feature.
 2015-11-03 15:46:07 -05:00
Thomas Fiala
57e3ee8c1a [Reactor] Implement the Cython function advance_to_steady_state 
Resolves #95
Resolves #303
 2015-11-03 15:41:58 -05:00
Thomas Fiala
16ab7dff51 [Reactor] Implement functions getState for reactors and reactor networks 
These are simpler forms of getInitialConditions.
 2015-11-03 14:34:28 -05:00
Ray Speth
592a40a1de [SCons] Remove unused configuration options 2015-10-29 22:26:52 -04:00
Ray Speth
c983d730a6 [SCons] Remove 'include/cantera/ext' when running 'scons clean' 2015-10-29 12:27:47 -04:00
Ray Speth
84566a3a7d [SCons] Fix incorrect directory created in build tree 
The 'Mkdir' command was creating a (literal) '#include' directory, rather than
taking the '#' to mean the top of the source tree. The 'Mkdir' command is
unnecessary anyway, since the 'Copy' command will create the necessary
subdirectory.

Fixes #304.
 2015-10-29 12:27:47 -04:00
Bryan W. Weber
afde0a7b52 [Doc] Remove old F77 and F90 SCons options from Intel instructions 2015-10-28 15:33:13 -04:00
Bryan W. Weber
d4fb85d4c3 [Doc] Clarify cloning instructions 
Clarify the instructions on how to clone the repository and which tags or branches should be checked out to get certain releases of the software.
 2015-10-28 15:31:33 -04:00
Bryan W. Weber
b395c68236 [SCons] Fix Cantera.mak cannot be written if extra_inc_dirs or extra_lib_dirs is specified 2015-10-28 12:55:23 -04:00
Bryan W. Weber
6cca4cf55c [Doc] Recommend to use pip to install optional Python packages on Ubuntu 2015-10-26 10:32:31 -04:00
imitrichev
f7a0e14f3e Remove unused field m_logA from class SurfaceArrhenius 2015-10-25 15:41:59 -04:00
imitrichev
40e09043bc Added methods to InterfaceKinetics to get effective rate parameters 
Effective rate parameters are used in SurfaceArrhenius reactions.

Resolves #297.
 2015-10-25 15:41:31 -04:00
Ivan Mitrichev
02fc127c13 Cython minimum version is 0.19 
Also, setuptools is required to build/install the python module.

Resolves #302.
 2015-10-25 14:15:45 -04:00
Bryan W. Weber
2e79a0978e [Doc] Update Homebrew install instructions. 
Update the Homebrew install instructions with a recommendation on how to install the Matlab toolbox and add additional options that are supported during the install process.
 2015-10-25 09:15:31 -04:00
Ray Speth
f910f8c3ee Bump development version to 2.3.0a1 2015-10-24 20:21:32 -04:00
Ray Speth
02ee03ffb2 [Doc] Mention IPython and Matplotlib in installation instructions 2015-10-24 17:47:49 -04:00
Ray Speth
92311f0b67 [Doc] Mention '--with-python3' option for Homebrew installer 2015-10-24 17:47:49 -04:00
Bryan W. Weber
eee1de7368 Merge pull request #300 from bryanwweber/fix-matlab-purefluid-functions 
Fix Matlab PureFluid functions and documentation
 2015-10-24 15:16:40 -04:00
Bryan W. Weber
0be9e7eef7 [Matlab] Fix spacing in private functions 2015-10-24 08:05:52 -04:00
Bryan W. Weber
0b5c97ad4f [Doc] Correct docs for setState_*sat in Matlab 
Correct the documentation to clarify that a vector must be passed in to
these functions, not a single value.
 2015-10-24 08:05:45 -04:00
Bryan W. Weber
5aabfe9704 [Matlab] Fix setState_sat*.m functions 
Fix the setState_satLiquid and setState_satVapor functions so that they call the main set
method instead of the underlying C++ layer. Resolves #299.
 2015-10-24 07:56:10 -04:00
Ray Speth
87aaa6ad1e Use math functions from C++11 standard library 2015-10-19 13:14:40 -04:00
Ray Speth
0542e694a9 [Thermo] Merge classes StoichSubstance and StoichSubstanceSSTP 
Use the implementation of StoichSubstanceSSTP (descended from
SingleSpeciesTP) but change the name to StoichSubstance.
 2015-10-19 00:17:40 -04:00
Ray Speth
ffab95f3ef Automatically check out cppformat submodule if needed 2015-10-18 18:54:09 -04:00
Ray Speth
4a411b76bb Use git submodule for googletest 2015-10-18 18:54:09 -04:00
Ray Speth
c0eca16b34 Exclude cppformat from Doxygen docs 2015-10-17 22:43:20 -04:00
Ray Speth
e094967ebb [Doc] Update version requirements 2015-10-17 22:35:37 -04:00
Ray Speth
c8e380d88c [SCons] Invalid command line arguments set a non-zero return code 2015-10-17 19:00:18 -04:00
Ray Speth
90b0ee152b Fix compilation with GCC 4.6 and 4.7 
The standard libraries for these versions of GCC do not have 'emplace'
methods for associative containers.
 2015-10-17 18:58:50 -04:00
Ray Speth
7c9bc364f5 [SCons] Add helpful error message when cppformat submodule is missing 2015-10-17 18:58:50 -04:00
Ray Speth
0647823ada Replace DATA_PTR macro with calls to data() 2015-10-17 18:58:50 -04:00
Ray Speth
8b16eb489f Eliminate unnecessary aliases for member variables in HMWSoln 2015-10-17 18:58:50 -04:00
Ray Speth
91d3002df1 Make use of "make_shared" where possible 2015-10-17 18:58:50 -04:00
Ray Speth
a945ef2c23 Make use of initializer lists where appropriate 2015-10-17 18:58:50 -04:00
Ray Speth
f9375e1a09 Use locks/mutexes from the standard library instead of Boost.Thread 
This eliminates the need to link against any of the compiled Boost libraries,
and means that we can always build in thread-safe mode
 2015-10-17 18:58:50 -04:00
Ray Speth
a03f370cfd Make use of emplace and emplace_back methods 2015-10-14 18:45:23 -04:00
Ray Speth
c3a16ec1fb Update AssertThrowMsg and AssertFinite to use cppformat 2015-10-14 18:45:23 -04:00
Ray Speth
fb4eece9f8 Use std::unique_ptr instead of raw pointers where appropriate 2015-10-14 18:45:23 -04:00
Ray Speth
0690626ab8 Make m_sub a regular member of WaterSSTP instead of a pointer 2015-10-14 18:45:23 -04:00
Ray Speth
ffc4ba07da Make m_phi a regular member of WaterPropsIAPWS instead of a pointer 2015-10-14 18:45:23 -04:00
Ray Speth
3c05e801a4 Remove unused variable MetalSHEelectrons::xdef_ 2015-10-14 18:45:23 -04:00
Ray Speth
3f6d8b0aca Use cppformat instead of int2str and fp2str 2015-10-14 18:45:23 -04:00
Ray Speth
78e2d13da7 Eliminate some special cases by using std::vector.data() 
Unlike &vec[0], vec.data() is a valid operation even when vec is empty,
removing the need to allocate space in vectors just so we can get an
address that won't be used.
 2015-10-14 18:45:23 -04:00
Ray Speth
2589a27b6c Use range-based for and auto to simplify some loops 2015-10-14 18:45:23 -04:00
Ray Speth
c2ba24c0c2 Fix possible memory leak in newPhase 
If importPhase threw an exception, then the ThermoPhase object allocated here
would not be deleted. Switching to a smart pointer fixes this problem.
 2015-10-14 18:45:23 -04:00
Ray Speth
f335350c35 Always use std::shared_ptr 
Since we compile as c++11, std::shared_ptr is guaranteed to exist.
 2015-10-14 18:45:23 -04:00
Ray Speth
e131766b71 Replace auto_ptr with unique_ptr 
auto_ptr is deprecated in c++11
 2015-10-14 18:45:23 -04:00
Ray Speth
0b2c7b59b8 Replace printf with writelogf in all library code 2015-10-14 18:45:23 -04:00