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Author SHA1 Message Date
Bryan W. Weber
549463683d Fix Sphinx and Doxygen warning messages about moved content 2018-07-29 17:47:14 -04:00
Bryan W. Weber
4ea9d35a2b Add the CTI API documentation back to the main index page 2018-07-29 17:47:14 -04:00
Bryan W. Weber
3fae1c1a9a Remove pages moved to the new website 2018-07-29 17:47:14 -04:00
Bryan W. Weber
9670c5dac6 Remove most content from Sphinx docs index page 
It's all moved elsewhere on the new site.
 2018-07-29 17:47:14 -04:00
Bryan W. Weber
2f3a0122d6 [Doc] Fix some style typos in the Doxygen docs 2018-07-29 17:47:14 -04:00
Bryan W. Weber
dbc3df1687 Switch Sphinx docs to KaTeX instead of MathJax 2018-07-29 17:47:14 -04:00
Bryan W. Weber
e8d28b0e89 Redo layout.html to match the style of and to add links to the main site 
We need to replace most of the Sphinx-defaults with things that look
like our new Nikola website and that link to places in the Nikola
website.
 2018-07-29 17:47:14 -04:00
Bryan W. Weber
2a7aed8968 Switch to the alabaster theme for API documentation 2018-07-29 17:47:14 -04:00
Bryan W. Weber
3052701250 Remove Mathjax todo that has already been done 2018-07-29 17:47:14 -04:00
Bryan W. Weber
21db5d84f3 Move Matlab docs out of the code-docs subfolder 
Now that examples are gone, it's not needed anymore.
 2018-07-29 17:47:14 -04:00
Bryan W. Weber
b68a87d624 Make Matlab doc sections more consistent with Python sections 2018-07-29 17:47:14 -04:00
Bryan W. Weber
d57f1d147d Minor formatting change in GRI30 Matlab docstring 2018-07-29 17:47:14 -04:00
Bryan W. Weber
7a69386b8d Remove unused SConscript functions for building Python examples 2018-07-29 17:47:14 -04:00
Bryan W. Weber
e7f346cddf Fix references to examples in docstrings 
Seems like the best bet is an absolute link, since the examples are no
longer in the Sphinx-generated docs
 2018-07-29 17:47:14 -04:00
Bryan W. Weber
e81cac9582 [Examples] Remove building Matlab examples into the docs 
They have moved to the new website
 2018-07-29 17:47:14 -04:00
Bryan W. Weber
71072c43db Remove unneeded files from the Matlab samples 2018-07-29 17:47:14 -04:00
Bryan W. Weber
cc9c8e5633 Remove "Migrating" docs 
It's been a few versions since we changed the Python module.
 2018-07-29 17:47:14 -04:00
Bryan W. Weber
7b6d04c381 [Examples] Remove building Python examples into the documentation 2018-07-29 17:47:14 -04:00
Ray Speth
1b605133d8 [Transport/Test] Add test of CK_Mode 2018-07-11 15:41:42 -04:00
Ray Speth
435f28641e [Transport] Indicate value of CK_Mode flag in transportType string 2018-07-11 15:40:28 -04:00
Ray Speth
35aa8be61e [Transport] Fix to enable 'CK_Mix' and 'CK_Multi' model specifications 
These model strings were being treated in TransportFactory in a way that
effectively resulted in creation of regular 'Mix' and 'Multi' transport objects.
 2018-07-11 14:13:16 -04:00
Ray Speth
333d388f90 [SCons] Improve transition from system_googletest to googletest option 2018-07-09 15:24:25 -04:00
Ray Speth
9bad354553 Mark googletest-based tests as failures if googletest is not available 2018-07-09 15:24:25 -04:00
band-a-prend
fb4a36b1ca [SCons] implement 'googletest' option 
New scons build option introduced to replace 'system_googletest'
and allow to not use 'googletest' module while running test
(all tests that require this module could be omited)

New option description:
'googletest',

"""Select whether to use gtest/gmock from system
   installation ('system'), from a Git submodule ('submodule'), to decide
   automatically ('default') or don't look for gtest/gmock ('none')
   and don't run tests that depend on gtest/gmock.
   If this option is set then it suppress the deprecated 'system_googletest' option."""

Old option is still presented and mentioned as 'deprecated'.
Option 'googletest' supresses the old 'system_googletest' one.
 2018-07-09 15:24:25 -04:00
BangShiuh
5c783c708f [Transport/Test] Add tests for IonTransport properties 2018-06-15 10:44:46 -04:00
BangShiuh
1245a694e5 [Test/1D] change TestIonFlame to use IonGasTransport 2018-06-15 10:44:46 -04:00
BangShiuh
fa9b9374cf [1D] Add polyfit for electron transport profile 2018-06-15 10:44:46 -04:00
bangshiuh
f7852ad84c [Transport] Add use Blancs law to calculate mobilities 2018-06-15 10:44:46 -04:00
bangshiuh
eeb27d84a9 [1D] Remove charge neutrality solver option from IonFlow 2018-06-15 10:44:46 -04:00
BangShiuh
3a0f46eb56 [Transport] Add class IonGasTransport 2018-06-15 10:44:46 -04:00
BangShiuh
b7e32e4604 [Transport] add dispersion coefficient and quadrupole polarizability 2018-06-15 10:44:46 -04:00
Ray Speth
4b4128aebd [Doc] Note requirement to call modifySpecies and modifyReaction 
Modifying Reaction and Species objects alone does not affect Kinetics or
ThermoPhase objects unless the modified objects are passed back to
modifyReaction or modifySpecies.
 2018-06-07 16:24:19 -04:00
Ray Speth
a1c12b4a3b [Transport] Implement UnityLewisTransport::getMixDiffCoeffsMass 2018-06-07 13:52:26 -04:00
Ray Speth
d4492f3ea3 [Transport] Note required correction velocity for unity Lewis transport 2018-06-07 13:52:26 -04:00
Ray Speth
3c3ef10f93 [1D/Test] Add flame test for unity Lewis number transport 2018-06-07 13:52:26 -04:00
Armin Wehrfritz
29a3c19399 [Transport] Add test for unity Lewis number transport model 2018-06-07 13:52:26 -04:00
Armin Wehrfritz
d38d9da32c [Transport] Add unity Lewis number transport model 2018-06-07 13:52:26 -04:00
Ray Speth
3c978cdff6 [Equil] Deprecate get/setElementPotentials 2018-06-06 11:54:14 -04:00
Ray Speth
74167cc3eb [Equil] Don't use saved element potentials as initial guess 
Saved element potentials are only valid at equilibrium, and may not be a good
guess for calls to equilibrate() after the state has changed.

By always using the estimation method for the element potentials at the start of
the ChemEquil algorithm, the results of equilibrate() are repeatable, and do not
depend on the results of previous calls to equilibrate().

Resolves #524
 2018-06-06 11:54:14 -04:00
Bryan W. Weber
dab739013e Remove unnecessary include for fmtlib 2018-05-30 14:16:27 -04:00
Ray Speth
309871ae88 Use header-only form of libfmt 
Avoids problems when trying to link to static versions of libfmt.a which were
built without -fPIC.
 2018-05-30 14:16:27 -04:00
Bryan W. Weber
51d0d43a45 [fmt] Bump fmt submodule to version 5.0.0 2018-05-30 14:16:27 -04:00
Bryan W. Weber
e42b952a8a [SCons] Add INFO output for Eigen 
Prints whether system or private installation is used and the version of
Eigen
 2018-05-30 14:16:27 -04:00
Ray Speth
3be3f7dad5 Make updates for libfmt 5.0.0 backwards compatible 2018-05-30 14:16:27 -04:00
Bryan W. Weber
99d4972e6b Disable fmtlib fmt macro that shadows existing Group::fmt function 2018-05-30 14:16:27 -04:00
Bryan W. Weber
6b3c912ec3 Fix MemoryWriter is no longer available from fmtlib 
In fmtlib 5.0.0, MemoryWriter was removed. The recommendation is to
replace it with memory_buffer
 2018-05-30 14:16:27 -04:00
Bryan W. Weber
c8305375ef
[SCons] Remove <> from unknown git commit string 
The shell was interpreting these as redirect operators during compilation
 2018-05-23 17:36:22 -04:00
Bryan W. Weber
3fac5f2bc6
[SCons] Catch any Exception when checking git commit fails 
It doesn't matter why the check failed, just that it did and we don't know
the commit
 2018-05-23 17:35:49 -04:00
Ray Speth
b26dc65c41 [Doc] Provide links to docs for old versions of Cantera 2018-05-19 22:04:57 -04:00
Ray Speth
55490de871 Fix compiler warning about m_Faraday_dim 2018-05-19 22:04:57 -04:00