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Author SHA1 Message Date
Santosh Shanbhogue
3f382e2590 Add test to catch superflous entries in a tranport file 2016-12-09 19:59:52 -05:00
Santosh Shanbhogue
06578612eb Identify species with bad transport entries 2016-12-09 19:59:52 -05:00
Bryan W. Weber
c7db81f33c [Doc] Document the ReactorSurface class in Python 
Fixes #407
 2016-12-09 19:51:46 -05:00
arghdos
84e6775ee3 remove special treatment of falloff #'s, resolves #404 2016-12-06 21:30:20 -05:00
Santosh Shanbhogue
08b14b24ed [Doc] Add more links to Jupyter notebooks 2016-12-03 13:24:09 -05:00
Ray Speth
730107cdba [CI] Return exit code from 'scons test' to make Appveyor status correct 
Resolves #382
 2016-11-29 22:05:51 -05:00
Ray Speth
4c1ab0c49d [CI] Fix errors upgrading pip in-place on Appveyor 2016-11-29 22:04:55 -05:00
Ray Speth
1b4ea04277 [Doc] Update prereqs for using Windows binaries 2016-11-29 20:36:50 -05:00
Ray Speth
8ee7d432e1 [Doc] Warn OS X users about out-of-date system Numpy 2016-11-29 20:36:50 -05:00
Ray Speth
c6412a56a4 [Doc] Add DOI reserved for 2.3.0 release 2016-11-29 20:36:50 -05:00
Ray Speth
4cc8d72e10 [Doc] Update OS/Python versions for which binary installers are provided 2016-11-29 20:36:50 -05:00
Ray Speth
95e1ee49dc Bump version to 2.3.0b1 2016-11-29 20:36:50 -05:00
Ray Speth
89e729f6b8 [Doc] Update versions of supported dependencies 2016-11-29 20:36:50 -05:00
Kyle Niemeyer
dcebc5f01f [Doc] Fixed conda link in README 
Original link in README for conda (https://anaconda.org/cantera/repo?type=conda&label=main) seems to be broken, so replaced with new link (https://anaconda.org/Cantera/cantera).
 2016-11-29 09:53:35 -05:00
Bryan W. Weber
4829310f11 Add messages to the assertion statements in thermo.pyx 
Fixes #335
 2016-11-27 23:28:21 -05:00
Ray Speth
0787e4194e [Base] Fix parsing composition strings when last name contains a colon 
If the last species name in a composition string contained a colon, it would not
be parsed correctly.
 2016-11-27 17:41:37 -05:00
Ray Speth
aa4d07f543 [Thermo] Allow discontinuous thermo warnings to be suppressed 
Resolves #354
 2016-11-26 00:57:23 -05:00
Ray Speth
469cc63d99 Remove unused code from ReactionPathBuilder 2016-11-25 23:42:01 -05:00
Ray Speth
d7819af947 [SCons] Make versioning of cantera_shared optional 
Also, disable by default on MinGW to work around a SCons bug
 2016-11-25 23:42:00 -05:00
Ray Speth
1e87756a97 [CI] Run 'scons build' in parallel 
Both Travis and Appveyor make at least two cores available
 2016-11-25 23:41:56 -05:00
Ray Speth
8e6d53d18b Enable parsing of composition strings when species names contain colons 2016-11-25 18:19:38 -05:00
Ray Speth
1db103cd87 Fix Phase.species_index when species name contains a colon 2016-11-25 18:19:38 -05:00
Ray Speth
3300611379 Allow colons in species names in CTI phase definitions 2016-11-25 18:19:38 -05:00
Bryan W. Weber
05ad05c904 [ck2cti/Test] Add tests for explicit reverse reaction equal to zero 2016-11-25 18:18:38 -05:00
Bryan W. Weber
a9814a1216 [ck2cti] Don't include reactions with explicit reverse rate equal to zero 2016-11-25 18:18:38 -05:00
Bryan W. Weber
6b32c73eee [ck2cti] Use logging.error when a thermo entry can't be read. 
This matches the use when a reaction line can't be read.
 2016-11-25 18:18:38 -05:00
Bryan W. Weber
ce90a798c5 [ck2cti] Raise ValueError in compatible_quantities instead of Exception 2016-11-25 18:18:38 -05:00
Bryan W. Weber
990f995796 [ck2cti] Minor spacing updates to improve legibility 2016-11-25 18:18:38 -05:00
Bryan W. Weber
bed546ad92 [ck2cti] Remove unused isnumberlike function 2016-11-25 18:18:38 -05:00
Bryan W. Weber
e250d23435 [ck2cti] remove duplicate sys import 2016-11-25 18:18:38 -05:00
Kyle Niemeyer
3782543de5 Add Code of Conduct 
Adopt a Code of Conduct for interactions on the GitHub repo and User Group, to
set expectations on how people should behave and interact with each other, and
encourage/attract new members of the community.
 2016-11-22 20:24:45 -05:00
Ray Speth
d55ffa9b5c Add note about license and copyright of contributions 2016-11-22 18:42:47 -05:00
Bryan W. Weber
0c400a9a6f Add CONTRIBUTING.md 2016-11-22 18:42:47 -05:00
Bryan W. Weber
8ef33161a1 Add PULL_REQUEST_TEMPLATE.md 2016-11-22 18:42:47 -05:00
Bryan W. Weber
557e752fcb Add ISSUE_TEMPLATE.md 2016-11-22 18:42:47 -05:00
Ray Speth
50ad75f2a2 [Reactor] Make ReactorNet uncopyable 2016-11-14 20:34:45 -05:00
Ray Speth
b7fad42cda [Thermo] Check for null species thermo when adding species 2016-11-14 19:46:23 -05:00
Ray Speth
6dc92b618f [Doc] Eliminate some Doxygen and Sphinx warnings 2016-11-14 17:43:45 -05:00
Ray Speth
c677d13866 [SCons] Fix compilation when system Eigen is specified 
Also add note about adding /usr/include/eigen3 if needed
 2016-11-14 17:00:12 -05:00
Ray Speth
5861bc174d [Test] Remove unused files from test_problems directory 2016-11-14 00:16:34 -05:00
Ray Speth
0d241fd64a Use toSI instead of explicit constant for unit conversions 2016-11-13 22:58:15 -05:00
Ray Speth
955d5de98a [Equil] Eliminate use of 'goto' in vcs_MultiPhaseEquil 2016-11-13 22:23:04 -05:00
Bryan W. Weber
7d3ebdd358 [SCons] Check for NumPy using python_cmd if specified 2016-11-12 17:40:11 -05:00
Bryan W. Weber
adcd5dec3c [SCons] Use python3_array_home option 2016-11-12 17:40:11 -05:00
Ray Speth
170f1d0fad [1D/Python] Avoid unnecessary solve if first attempt succeeded 2016-11-12 16:15:38 -05:00
Ray Speth
4753ae4a86 [1D/Python] Add adjoint laminar flame speed sensitivity calculation 
This is approximately an order of magnitude faster than the 'forward' method for
calculating these sensitivities. It also eliminates the need to adjust the
solver tolerances.
 2016-11-12 14:48:01 -05:00
Ray Speth
0bfdf146c0 [1D] Include transport derivatives when computing Jacobian for adjoint 2016-11-12 14:48:01 -05:00
Ray Speth
ca8b101acc [1D] Add general support for calculating adjoint sensitivities 2016-11-12 14:48:01 -05:00
Ray Speth
b9ac39bf68 [Numerics] Failures in BandMatrix raise exceptions 
Store the 'info' flag returned by the underlying LAPACK function so that callers
can catch the exception and retrieve this information if desired.

Eliminate automatic 'bandmatrix.csv' output.
 2016-11-11 23:18:22 -05:00
Ray Speth
43f7bc8cdf [Numerics] Remove trailing commas when printing Array2D and BandMatrix 2016-11-11 23:06:35 -05:00