Ray Speth
2806907060
Fixed size_t conversion warnings related to class Adsorbate
2012-06-05 19:56:46 +00:00
Ray Speth
6cddd8a87a
Fixed 'unused variable' warninings when compiling without thread safety
2012-06-05 19:56:42 +00:00
Ray Speth
e084bd9c8d
Removed duplicate Doxygen stub
2012-06-05 19:56:37 +00:00
Ray Speth
1fb14fc86a
Skip building/installing some targets when layout=debian
...
Do not build the shared library.
Do not build csvdiff.
Do not install install_tsc
Do not install man pages (handled by debhelper)
Skip csvdiff for Debian package
More things not installed with Debian
2012-06-05 19:56:34 +00:00
Ray Speth
ec1abb55a1
Added debian file layout option
2012-06-05 19:56:30 +00:00
Ray Speth
f3c3f47bc5
Incremented version number (2.0.0b3)
2012-06-05 19:56:26 +00:00
Ray Speth
3ffaaeae4f
Remove debug symbols from Python extension when not in debug mode
2012-06-05 19:56:24 +00:00
Ray Speth
96114edb46
Fixed names of some executable scripts
...
Also added shebang line to ctml_writer
2012-06-05 19:56:21 +00:00
Ray Speth
8b497e2e97
Fixed some things that weren't cleaned up by 'scons clean'
2012-06-05 19:56:18 +00:00
Ray Speth
7709978392
Cleanup of MixMaster/Units package
2012-06-05 19:56:10 +00:00
Ray Speth
847e1ed0bd
Added missing man pages for mechanism conversion scripts / programs
2012-06-05 19:56:06 +00:00
Ray Speth
d2b0a92cd9
Fixed an error in ck2cti man page (and reformatted)
2012-06-05 19:56:02 +00:00
Ray Speth
02fdb22b2e
Fixed Matlab extension name on 32-bit platforms
2012-05-31 14:58:11 +00:00
Ray Speth
d645eaf418
Aggregate all test results into the summary printed after 'scons test'
...
In addition, if any of the Python, Matlab, or gtest tests fail, the test
process will not be aborted. SCons will still exit with a non-zero status.
2012-05-31 14:58:07 +00:00
Ray Speth
9f6c79eaf8
Fixed thread safety of TransportFactory
2012-05-31 14:58:03 +00:00
Ray Speth
2970e0c693
Added a ScopedLock typedef that can be used without requiring extra any #ifdefs
2012-05-31 14:57:54 +00:00
Ray Speth
cc042e088f
Enabled class Adsorbate
2012-05-31 14:57:49 +00:00
Ray Speth
55ef0f3c73
Removed some unimplemented configuration options
2012-05-31 14:57:44 +00:00
Ray Speth
6011f24b38
Removed unnecessary WITH_FEATURE configuration options
2012-05-31 14:57:32 +00:00
Ray Speth
2f9f2abf5e
Fixed setting the _initialized flag on restored Python OneD objects
2012-05-30 16:02:48 +00:00
Ray Speth
84dfde0295
Removed some utility functions that duplicate standard library functions
2012-05-30 16:02:45 +00:00
Ray Speth
fb3be32683
Removed some non-functional CBLAS code from ctlapack
2012-05-30 16:02:41 +00:00
Ray Speth
f24f8f6d3b
Fixed update logic for temperature-dependent properties in MultiTransport
2012-05-30 16:02:35 +00:00
Ray Speth
cddd2ec724
Updated some documentation for using the Intel compiler and MKL
2012-05-29 21:22:30 +00:00
Ray Speth
54f18a4e95
Fixed a problem linking to BLAS/LAPACK libraries not on the system path
2012-05-29 21:22:27 +00:00
Ray Speth
64bb2bc667
Removed some dead argument-parsing code from the regression tests
2012-05-29 21:22:21 +00:00
Ray Speth
d3e98fe5a8
Corrected a bunch of spelling errors
2012-05-29 21:21:47 +00:00
Ray Speth
79af932b9a
Fixed timeouts that could cause cti->ctml conversions to stall
2012-05-29 18:03:39 +00:00
Ray Speth
ba8acd41e0
Updated documentation for Phase/ThermoPhase class heirarchy
...
Removed some redundant documentation and fixed references to the no
longer existent Constituent and State classes.
2012-05-29 18:03:35 +00:00
Ray Speth
bdac195cb0
Added input file documentation for Chebyshev and P-log rate expressions
2012-05-29 18:03:31 +00:00
Ray Speth
176d8ecfe0
Updated the rxnpath1.py sample
...
This sample now uses a locally installed copy of Graphviz to produce an image,
instead of relying on a public 'webdot' server which no longer exists.
2012-05-29 18:03:27 +00:00
Ray Speth
b411f513ae
Resolved the namespace collision between the two classes named "Gaussian"
...
This was causing problems on MinGW builds where Gaussian "function" objects
were being misinterpreted as Gaussian "line broadeners" and returning
incorrect results.
2012-05-29 18:03:22 +00:00
Ray Speth
88a1f64466
Fixed list of libraries specified when linking the Matlab extension
2012-05-29 18:03:18 +00:00
Ray Speth
31ffb5e400
Added support for Sundials 2.5
2012-05-25 23:13:51 +00:00
Ray Speth
396d34e1ab
Fixed a deprecation warning with np.genfromtxt
2012-05-25 23:13:47 +00:00
Ray Speth
3df5c60e8f
Eliminated trailing commas from some CSV files used in regression tests
2012-05-25 23:13:42 +00:00
Ray Speth
16da33ad42
Fixed compiler warnings in the test suite
2012-05-25 23:13:30 +00:00
Ray Speth
9b2d97f41e
Fixed some compiler warnings
2012-05-25 23:13:18 +00:00
Ray Speth
15b12608e3
Corrected labels on output from compareTimeSeries
2012-05-24 16:30:10 +00:00
Ray Speth
5a8b97e38e
Removed a 'goto' statement
2012-05-24 16:30:08 +00:00
Ray Speth
15755c1447
Pruning some dead code
2012-05-24 16:30:04 +00:00
Ray Speth
dcb7f37a3c
Modify return value handling for some examples and tests
2012-05-24 16:29:59 +00:00
Ray Speth
5ef6a024a9
Fixed some case statements that were missing a 'break'
2012-05-24 16:29:55 +00:00
Ray Speth
bb358e812f
Removed unnecessary manual memory management from equilibrate driver
2012-05-24 16:29:52 +00:00
Ray Speth
047f3611e1
Deprecated unused "getGasTransportData" functions
2012-05-24 16:29:49 +00:00
Ray Speth
7cc9a15c33
Fixed a compiler warning when building a 32-bit Matlab extension with MSVC
2012-05-24 16:29:46 +00:00
Ray Speth
5af70f3db8
Removed keyword-substitution cruft
2012-05-24 16:29:29 +00:00
Ray Speth
761c2589e3
Added a test for reactors with wall interactions
2012-05-24 16:29:23 +00:00
Ray Speth
ee746bf895
Fixed a size_t-related error that caused Reactor walls to behave incorrectly
2012-05-24 16:29:20 +00:00
Ray Speth
d70507ad79
Fixed deletion of a bad pointer in CVodesIntegrator
...
m_fdata was not initialized to 0, so if the integrator was deleted before
initialize() was called, the destructor would attempt to delete it using the
uninitialized value.
2012-05-24 16:29:16 +00:00
