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Author SHA1 Message Date
Henry Weller
fec5c063f5 polyMesh: clear cellTree if mesh moves 
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2235
 2016-09-04 21:16:55 +01:00
Henry Weller
3eacfb7621 PV*Readers/Allwmake: set CXX and CC if required 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2233
 2016-09-04 21:05:20 +01:00
Henry Weller
77152f3f10 polyBoundaryMesh: Remove patchGroups which clash with patch names 
This allows freedom in the naming of patches when patchGroup-based
boundary specification is not used.

Patch contributed by Mattijs Janssens
 2016-09-04 10:35:19 +01:00
Henry Weller
a7df748094 tutorials/multiphase/interDyMFoam/ras/DTCHull: Corrected specification of restraints 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2224
 2016-09-03 21:14:17 +01:00
Henry Weller
dbe30eaef7 decomposePar: corrected decomposeParDict read using -region option 
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2227
 2016-09-03 20:54:16 +01:00
Henry Weller
5507dd7868 EulerCoordinateRotation,STARCDCoordinateRotation: Corrected typo 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2225
 2016-09-03 16:46:01 +01:00
Henry Weller
133518f6e4 OpenFOAM-dev/etc/bashrc: Use 'pwd -P' to handle relative paths and links 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2223
 2016-09-03 15:57:52 +01:00
Henry Weller
582f59c4cb Revert "polyBoundaryMesh::groupPatchIDs(): Make name clash between patch and group name fatal" 
This reverts commit 12ee017901.
 2016-08-26 11:44:56 +01:00
Henry Weller
12ee017901 polyBoundaryMesh::groupPatchIDs(): Make name clash between patch and group name fatal 
If this clash is allowed boundary conditions set by wildcards are
processed incorrectly.
 2016-08-25 16:42:08 +01:00
Henry Weller
71a646e63c src/Pstream: Added Allwclean consistent with the Allwmake 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2218
 2016-08-25 08:25:12 +01:00
Henry Weller
22722a877c foamToVTK, PVFoamReader: Resolve problems converting VTK_WEDGE 
- There will be triangles rendered inside the mesh (when
    surface-rendering), because one of the cell's triangles is defined
    as a quadrangle in VTK_WEDGE.

  - Therefore, this VTK_WEDGE representation is only used when
    decomposing the mesh, otherwise the correct representation is done
    by VTK_POLYHEDRON.

  - Furthermore, using VTK_PYRAMID gave worse result, because it renders
    2 triangles inside the mesh for the collapsed quadrangle, likely due
    to mismatch with the adjacent cell's face.

  - Using VTK_HEXAHEDRON was not tested in this iteration, given that it
    should give even worse results, when compared to using VTK_PYRAMID.

Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2099
 2016-08-24 22:08:10 +01:00
Henry Weller
b37269d481 functionObjects: Improved handling of multi-file indexing and code style 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
 2016-08-24 19:34:00 +01:00
Henry Weller
f64624924e forceCoeffs: Removed duplicate header writing 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
 2016-08-24 16:01:29 +01:00
Henry Weller
73eee8e542 functionObjects::forces: Corrected file names when using the 'binData' option 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2214
 2016-08-24 11:24:27 +01:00
Henry Weller
f50d727863 foamToVTK::vtkTopo: Apply fix from #1633 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2213
 2016-08-24 09:45:23 +01:00
Henry Weller
8396a0faf2 functionObjects::volRegion: Cache integral properties for writeFileHeader 2016-08-24 09:32:34 +01:00
Henry Weller
aef116bd60 Updated headers 2016-08-24 08:57:44 +01:00
Henry Weller
68f57d3126 lagrangian::Analytical: improved analytical integration for the U-equation 
Patch contributed by Timo Niemi
In response to bug-report http://bugs.openfoam.org/view.php?id=2199
 2016-08-23 22:03:24 +01:00
Henry Weller
9354748814 src/parallel/decompose: Remove dependency on "SCOTCH_ROOT" and repair "decompose/Allwclean" 
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2212
 2016-08-23 21:53:35 +01:00
Henry Weller
73c48c5a7e etc/bashrc, etc/config.sh: 
- "$FOAM_USER_APPBIN" and "$FOAM_USER_LIBBIN" have been added to
    "foamOldDirs" in "etc/bashrc" and "etc/config.sh/unset"

  - "$OPAL_PREFIX" is now undefined in the option "SYSTEMOPENMPI" within
    "etc/config.sh/mpi", but only if the path defined in this variable
    is cleaned when using "foamCleanPath".

  - "$OPAL_PREFIX" is now also conditionally undefined in
    "etc/config.sh/unset" when the path is picked up by "foamCleanPath".

Patch contributed by Bruno Santos
Resolved bug-report http://bugs.openfoam.org/view.php?id=2210
 2016-08-23 21:02:55 +01:00
Henry Weller
cf3d45016a wmake/rules/linux64.*KNL: Improved optimization option for Intel MIC (Knights Landing) processor 
Patch contributed by Paul Edwards, Intel.
 2016-08-22 16:27:46 +01:00
Henry Weller
b74d95b2a9 Corrected documentation in classes derived from temperatureCoupleBase 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2207
 2016-08-22 14:31:40 +01:00
Henry Weller
4ebf07f9cc doc/Guides: Updated to OpenFOAM-4.0 2016-08-20 13:29:07 +01:00
Henry Weller
8f12b35976 codingStyleGuide: Improved formatting 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2194
 2016-08-20 09:33:11 +01:00
Henry Weller
d245a7e485 septernion: Correct quaternion normalization after averaging 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2203
 2016-08-19 20:32:30 +01:00
Henry Weller
3744137dc5 /primitives/triad: Initialize array to avoid warning from icpc 2016-08-18 11:22:15 +01:00
Henry Weller
98ba05e02e ODESolvers::adaptiveSolver: Changed functions which need not be to non-virtual 
Resolves warnings from clang
 2016-08-18 10:36:52 +01:00
Henry Weller
e8675e7088 functionObjects::writeObjects: Corrected namespace for the definition of the NamedEnum 
Resolves compilation failure with clang
 2016-08-18 10:36:04 +01:00
Henry Weller
7a674dbc07 epsilonWallFunction, omegaWallFunction: Removed unused variabl 2016-08-18 08:23:54 +01:00
Henry Weller
628d86e575 multivariateScheme: Correct local typedef name 2016-08-17 23:04:00 +01:00
Henry Weller
68ebfd83c7 Update header 2016-08-17 23:03:49 +01:00
Henry Weller
39c241689e primitives/hashes/SHA1: undef macros 2016-08-17 23:03:27 +01:00
Henry Weller
4669fa03a1 sigWriteNow, sigStopAtWriteNow: Change runTimePtr_ to static member 2016-08-17 23:02:58 +01:00
Henry Weller
15621678fa fvDOM radiation model: Removed unreliable 'cacheDiv' option 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2182
 2016-08-17 17:12:20 +01:00
Henry Weller
16804b9d6f functionObjects::writeObjects: improved code and docs 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2090
 2016-08-17 14:41:42 +01:00
Henry Weller
f6acf86a5e viscosityModels::Casson: Added example specification for blood 
Contributed by Sergey Sindeev
 2016-08-17 13:46:46 +01:00
Henry Weller
12edcc8bad viscosityModels::Casson: Updated constructor to avoid the need to specify the dimensions of the coefficients 2016-08-17 13:45:18 +01:00
Henry Weller
1ba4a19d96 ODESolvers: Updated references to APA style 2016-08-17 10:27:15 +01:00
Henry Weller
ab205d2e94 viscosityModels::Casson: New viscosity model 
Description
    An incompressible Casson non-Newtonian viscosity model.

    References:
    \verbatim
        Casson, N. (1959).
        Rheology of disperse systems.
        In Proceedings of a Conference Organized by the
        British Society of Rheology.
        Pergamon Press, New York.

        Fournier, R. L. (2011).
        Basic transport phenomena in biomedical engineering.
        CRC Press.
    \endverbatim

Contributed by Sergey Sindeev
 2016-08-17 09:38:17 +01:00
Henry Weller
4e0d45e821 viscosityModels: State virtual functions are virtual also in the derived classes 2016-08-17 09:37:37 +01:00
Henry Weller
1c1791bb2a surfacePatch.C: Corrected formatting 2016-08-17 08:08:21 +01:00
Henry Weller
7238bd1016 functionObjects::writeObjects: Added option "writeOption" 
Description
    Allows specification of different writing frequency of objects registered
    to the database.

    It has similar functionality as the main time database through the
    \c writeControl setting:
      - timeStep
      - writeTime
      - adjustableRunTime
      - runTime
      - clockTime
      - cpuTime

    It also has the ability to write the selected objects that were defined
    with the respective write mode for the requested \c writeOption, namely:
      - \c autoWrite - objects set to write at output time
      - \c noWrite   - objects set to not write by default
      - \c anyWrite  - any option of the previous two

    Example of function object specification:
    \verbatim
    writeObjects1
    {
        type        writeObjects;
        libs        ("libutilityFunctionObjects.so");
        ...
        objects     (obj1 obj2);
        writeOption anyWrite;
    }
    \endverbatim

Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2090
 2016-08-16 23:41:22 +01:00
Henry Weller
fb22ab0b5f fvMesh,dynamicRefineFvMesh: Rename writeObjects -> writeObject for consistency with regIOobject 2016-08-16 23:40:27 +01:00
Henry Weller
f61ff85e7c dlLibraryTable: Add support for library path expansion 
Patch contributed by Mattijs Janssens
Resolves patch request http://bugs.openfoam.org/view.php?id=2195
 2016-08-16 16:12:19 +01:00
Henry Weller
e60bfc7d02 AMIInterpolation: Make tracking across AMI more robust 
If a suitable face an the receiving side of the AMI cannot be found the
particle is marked for deletion.
 2016-08-16 11:33:27 +01:00
Henry Weller
2673f4e2dd lagrangian: Delete lost particles on restart 
Warning messages are generated for each particle deleted
 2016-08-16 11:32:27 +01:00
Henry Weller
b24607a480 lagrangian::Cloud: Removed unused function 2016-08-16 11:31:51 +01:00
Henry Weller
db5c230819 lagrangian:: hasWallImpactDistance() need not be virtual 2016-08-16 11:31:14 +01:00
Henry Weller
8187170d2d tetPtI -> tetPti 2016-08-16 11:30:17 +01:00
Henry Weller
813baea823 ParaView: GUI resource files in plugins are no longer supported 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2192
 2016-08-16 08:46:39 +01:00