inserted gri 3.0 tranlib parameters

This commit is contained in:
Yeongdo Park 2019-03-03 13:35:19 -05:00
parent 8b886df5df
commit 2d5a3d934c
2 changed files with 108 additions and 0 deletions

42
GRI30-Prager/insertTranlib.py Executable file
View file

@ -0,0 +1,42 @@
#!/usr/bin/python
#
import os
import sys
import argparse
import subprocess as sp
parser = argparse.ArgumentParser(description='Optional app description')
# Switch
parser.add_argument('--overwrite', action='store_true',
help='write to transport file')
parser.add_argument('tranlib',
help='CHEMKIN transport data file')
parser.add_argument('foamTransport',
help='OpenFOAM transport data file')
args = parser.parse_args()
print args.overwrite
foamTranFile = args.foamTransport
tranlibFileName = args.tranlib
FNULL = open(os.devnull, 'w')
with open(tranlibFileName) as tranlibFile:
for line in tranlibFile:
name = line[:19].strip(" ")
params = "( {} );".format(line[19:70])
call_state = sp.call(["foamDictionary", "-entry", name, foamTranFile] , stdout=FNULL, stderr=FNULL)
if call_state == 0:
print "touching ", name, "..."
sp.check_call(["foamDictionary", "-entry", name+".transport.tranlib", "-set", params, foamTranFile], stdout=FNULL, stderr=FNULL)

View file

@ -30,6 +30,7 @@ H2
diameter 2.92; diameter 2.92;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 0.455; dipolePolarizability 0.455;
tranlib ( 1 38 2.92 0 0.79 280 );
} }
} }
@ -58,6 +59,7 @@ H
diameter 2.05; diameter 2.05;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 0.281; dipolePolarizability 0.281;
tranlib ( 0 145 2.05 0 0 0 );
} }
} }
@ -86,6 +88,7 @@ O
diameter 2.75; diameter 2.75;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 0.678; dipolePolarizability 0.678;
tranlib ( 0 80 2.75 0 0 0 );
} }
} }
@ -114,6 +117,7 @@ O2
diameter 3.407; diameter 3.407;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 1.131; dipolePolarizability 1.131;
tranlib ( 1 107.4 3.458 0 1.6 3.8 );
} }
} }
@ -142,6 +146,7 @@ OH
diameter 2.75; diameter 2.75;
dipoleMoment 1.66; dipoleMoment 1.66;
dipolePolarizability 0.743; dipolePolarizability 0.743;
tranlib ( 1 80 2.75 0 0 0 );
} }
} }
@ -170,6 +175,7 @@ H2O
diameter 2.605; diameter 2.605;
dipoleMoment 1.844; dipoleMoment 1.844;
dipolePolarizability 1.053; dipolePolarizability 1.053;
tranlib ( 2 572.4 2.605 1.844 0 4 );
} }
} }
@ -198,6 +204,7 @@ HO2
diameter 3.458; diameter 3.458;
dipoleMoment 2.2; dipoleMoment 2.2;
dipolePolarizability 1.489; dipolePolarizability 1.489;
tranlib ( 2 107.4 3.458 0 0 1 );
} }
} }
@ -226,6 +233,7 @@ H2O2
diameter 3.458; diameter 3.458;
dipoleMoment 2.2; dipoleMoment 2.2;
dipolePolarizability 1.773; dipolePolarizability 1.773;
tranlib ( 2 107.4 3.458 0 0 3.8 );
} }
} }
@ -254,6 +262,7 @@ C
diameter 2.75; diameter 2.75;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 1.286; dipolePolarizability 1.286;
tranlib ( 0 71.4 3.298 0 0 0 );
} }
} }
@ -282,6 +291,7 @@ CH
diameter 2.75; diameter 2.75;
dipoleMoment 1.5; dipoleMoment 1.5;
dipolePolarizability 1.745; dipolePolarizability 1.745;
tranlib ( 1 80 2.75 0 0 0 );
} }
} }
@ -310,6 +320,7 @@ CH2
diameter 3.746; diameter 3.746;
dipoleMoment 0.6; dipoleMoment 0.6;
dipolePolarizability 1.654; dipolePolarizability 1.654;
tranlib ( 1 144 3.8 0 0 0 );
} }
} }
@ -334,6 +345,7 @@ CH2(S)
As 9.49616e-07; As 9.49616e-07;
Ts 177.057; Ts 177.057;
dipolePolarizability 2.009; dipolePolarizability 2.009;
tranlib ( 1 144 3.8 0 0 0 );
} }
} }
@ -362,6 +374,7 @@ CH3
diameter 3.746; diameter 3.746;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 1.897; dipolePolarizability 1.897;
tranlib ( 1 144 3.8 0 0 0 );
} }
} }
@ -390,6 +403,7 @@ CH4
diameter 3.746; diameter 3.746;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 2.6; dipolePolarizability 2.6;
tranlib ( 2 141.4 3.746 0 2.6 13 );
} }
} }
@ -418,6 +432,7 @@ CO
diameter 3.65; diameter 3.65;
dipoleMoment 0.112; dipoleMoment 0.112;
dipolePolarizability 1.95; dipolePolarizability 1.95;
tranlib ( 1 98.1 3.65 0 1.95 1.8 );
} }
} }
@ -446,6 +461,7 @@ CO2
diameter 3.763; diameter 3.763;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 2.65; dipolePolarizability 2.65;
tranlib ( 1 244 3.763 0 2.65 2.1 );
} }
} }
@ -474,6 +490,7 @@ HCO
diameter 3.59; diameter 3.59;
dipoleMoment 2; dipoleMoment 2;
dipolePolarizability 2.138; dipolePolarizability 2.138;
tranlib ( 2 498 3.59 0 0 0 );
} }
} }
@ -502,6 +519,7 @@ CH2O
diameter 3.59; diameter 3.59;
dipoleMoment 2.33; dipoleMoment 2.33;
dipolePolarizability 2.292; dipolePolarizability 2.292;
tranlib ( 2 498 3.59 0 0 2 );
} }
} }
@ -530,6 +548,7 @@ CH2OH
diameter 3.69; diameter 3.69;
dipoleMoment 1.5; dipoleMoment 1.5;
dipolePolarizability 2.551; dipolePolarizability 2.551;
tranlib ( 2 417 3.69 1.7 0 2 );
} }
} }
@ -558,6 +577,7 @@ CH3O
diameter 3.69; diameter 3.69;
dipoleMoment 2; dipoleMoment 2;
dipolePolarizability 2.669; dipolePolarizability 2.669;
tranlib ( 2 417 3.69 1.7 0 2 );
} }
} }
@ -586,6 +606,7 @@ CH3OH
diameter 3.69; diameter 3.69;
dipoleMoment 1.7; dipoleMoment 1.7;
dipolePolarizability 2.786; dipolePolarizability 2.786;
tranlib ( 2 481.8 3.626 0 0 1 );
} }
} }
@ -614,6 +635,7 @@ C2H
diameter 4.1; diameter 4.1;
dipoleMoment 0.7; dipoleMoment 0.7;
dipolePolarizability 2.974; dipolePolarizability 2.974;
tranlib ( 1 209 4.1 0 0 2.5 );
} }
} }
@ -642,6 +664,7 @@ C2H2
diameter 4.1; diameter 4.1;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 2.867; dipolePolarizability 2.867;
tranlib ( 1 209 4.1 0 0 2.5 );
} }
} }
@ -670,6 +693,7 @@ C2H3
diameter 4.1; diameter 4.1;
dipoleMoment 0.7; dipoleMoment 0.7;
dipolePolarizability 3.395; dipolePolarizability 3.395;
tranlib ( 2 209 4.1 0 0 1 );
} }
} }
@ -698,6 +722,7 @@ C2H4
diameter 4.05; diameter 4.05;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 3.584; dipolePolarizability 3.584;
tranlib ( 2 280.8 3.971 0 0 1.5 );
} }
} }
@ -726,6 +751,7 @@ C2H5
diameter 4.32; diameter 4.32;
dipoleMoment 0.3; dipoleMoment 0.3;
dipolePolarizability 3.746; dipolePolarizability 3.746;
tranlib ( 2 252.3 4.302 0 0 1.5 );
} }
} }
@ -754,6 +780,7 @@ C2H6
diameter 4.32; diameter 4.32;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 4.036; dipolePolarizability 4.036;
tranlib ( 2 252.3 4.302 0 0 1.5 );
} }
} }
@ -782,6 +809,7 @@ HCCO
diameter 3.97; diameter 3.97;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 3.631; dipolePolarizability 3.631;
tranlib ( 2 150 2.5 0 0 1 );
} }
} }
@ -810,6 +838,7 @@ CH2CO
diameter 3.97; diameter 3.97;
dipoleMoment 1.42; dipoleMoment 1.42;
dipolePolarizability 3.631; dipolePolarizability 3.631;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -834,6 +863,7 @@ HCCOH
As 1.42053e-06; As 1.42053e-06;
Ts 453.172; Ts 453.172;
dipolePolarizability 3.596; dipolePolarizability 3.596;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -858,6 +888,7 @@ N
As 1.34918e-06; As 1.34918e-06;
Ts 122.91; Ts 122.91;
dipolePolarizability 1.081; dipolePolarizability 1.081;
tranlib ( 0 71.4 3.298 0 0 0 );
} }
} }
@ -881,6 +912,7 @@ NH
{ {
As 2.1351e-06; As 2.1351e-06;
Ts 127.828; Ts 127.828;
tranlib ( 1 80 2.65 0 0 4 );
} }
} }
@ -905,6 +937,7 @@ NH2
As 2.2056e-06; As 2.2056e-06;
Ts 127.828; Ts 127.828;
dipolePolarizability 1.401; dipolePolarizability 1.401;
tranlib ( 2 80 2.65 0 2.26 4 );
} }
} }
@ -929,6 +962,7 @@ NH3
As 1.60775e-06; As 1.60775e-06;
Ts 502.141; Ts 502.141;
dipolePolarizability 1.634; dipolePolarizability 1.634;
tranlib ( 2 481 2.92 1.47 0 10 );
} }
} }
@ -953,6 +987,7 @@ NNH
As 1.46438e-06; As 1.46438e-06;
Ts 122.91; Ts 122.91;
dipolePolarizability 2.026; dipolePolarizability 2.026;
tranlib ( 2 71.4 3.798 0 0 1 );
} }
} }
@ -977,6 +1012,7 @@ NO
As 1.58238e-06; As 1.58238e-06;
Ts 139.283; Ts 139.283;
dipolePolarizability 1.285; dipolePolarizability 1.285;
tranlib ( 1 97.53 3.621 0 1.76 4 );
} }
} }
@ -1001,6 +1037,7 @@ NO2
As 1.98953e-06; As 1.98953e-06;
Ts 231.294; Ts 231.294;
dipolePolarizability 2.21; dipolePolarizability 2.21;
tranlib ( 2 200 3.5 0 0 1 );
} }
} }
@ -1025,6 +1062,7 @@ N2O
As 1.61741e-06; As 1.61741e-06;
Ts 264.864; Ts 264.864;
dipolePolarizability 2.378; dipolePolarizability 2.378;
tranlib ( 1 232.4 3.828 0 0 1 );
} }
} }
@ -1049,6 +1087,7 @@ HNO
As 1.70043e-06; As 1.70043e-06;
Ts 153.722; Ts 153.722;
dipolePolarizability 1.753; dipolePolarizability 1.753;
tranlib ( 2 116.7 3.492 0 0 1 );
} }
} }
@ -1073,6 +1112,7 @@ CN
As 1.33729e-06; As 1.33729e-06;
Ts 124.865; Ts 124.865;
dipolePolarizability 2.803; dipolePolarizability 2.803;
tranlib ( 1 75 3.856 0 0 1 );
} }
} }
@ -1097,6 +1137,7 @@ HCN
As 1.3049e-06; As 1.3049e-06;
Ts 526.585; Ts 526.585;
dipolePolarizability 2.126; dipolePolarizability 2.126;
tranlib ( 1 569 3.63 0 0 1 );
} }
} }
@ -1121,6 +1162,7 @@ H2CN
As 1.32901e-06; As 1.32901e-06;
Ts 526.585; Ts 526.585;
dipolePolarizability 2.595; dipolePolarizability 2.595;
tranlib ( 1 569 3.63 0 0 1 );
} }
} }
@ -1144,6 +1186,7 @@ HCNN
{ {
As 3.74158e-06; As 3.74158e-06;
Ts 182.436; Ts 182.436;
tranlib ( 2 150 2.5 0 0 1 );
} }
} }
@ -1168,6 +1211,7 @@ HCNO
As 1.59916e-06; As 1.59916e-06;
Ts 264.864; Ts 264.864;
dipolePolarizability 3.226; dipolePolarizability 3.226;
tranlib ( 2 232.4 3.828 0 0 1 );
} }
} }
@ -1192,6 +1236,7 @@ HOCN
As 1.59916e-06; As 1.59916e-06;
Ts 264.864; Ts 264.864;
dipolePolarizability 2.826; dipolePolarizability 2.826;
tranlib ( 2 232.4 3.828 0 0 1 );
} }
} }
@ -1216,6 +1261,7 @@ HNCO
As 1.59916e-06; As 1.59916e-06;
Ts 264.864; Ts 264.864;
dipolePolarizability 2.863; dipolePolarizability 2.863;
tranlib ( 2 232.4 3.828 0 0 1 );
} }
} }
@ -1240,6 +1286,7 @@ NCO
As 1.58032e-06; As 1.58032e-06;
Ts 264.864; Ts 264.864;
dipolePolarizability 2.679; dipolePolarizability 2.679;
tranlib ( 1 232.4 3.828 0 0 1 );
} }
} }
@ -1268,6 +1315,7 @@ N2
diameter 3.652; diameter 3.652;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 1.76; dipolePolarizability 1.76;
tranlib ( 1 97.53 3.621 0 1.76 4 );
} }
} }
@ -1291,6 +1339,7 @@ AR
{ {
As 2.09517e-06; As 2.09517e-06;
Ts 170.441; Ts 170.441;
tranlib ( 0 136.5 3.33 0 0 0 );
} }
} }
@ -1314,6 +1363,7 @@ C3H7
{ {
As 9.40481e-07; As 9.40481e-07;
Ts 300.719; Ts 300.719;
tranlib ( 2 266.8 4.982 0 0 1 );
} }
} }
@ -1338,6 +1388,7 @@ C3H8
As 9.51417e-07; As 9.51417e-07;
Ts 300.719; Ts 300.719;
dipolePolarizability 5.819; dipolePolarizability 5.819;
tranlib ( 2 266.8 4.982 0 0 1 );
} }
} }
@ -1366,6 +1417,7 @@ CH2CHO
diameter 3.97; diameter 3.97;
dipoleMoment 0; dipoleMoment 0;
dipolePolarizability 3.987; dipolePolarizability 3.987;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -1394,6 +1446,7 @@ CH3CHO
diameter 3.97; diameter 3.97;
dipoleMoment 2.69; dipoleMoment 2.69;
dipolePolarizability 4.13; dipolePolarizability 4.13;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -1419,6 +1472,7 @@ HCO+
Ts 492.739; Ts 492.739;
rotationalRelaxation 0; rotationalRelaxation 0;
dipolePolarizability 1.356; dipolePolarizability 1.356;
tranlib ( 1 498 3.59 0 0 0 );
} }
} }
@ -1444,6 +1498,7 @@ H3O+
Ts 745.739; Ts 745.739;
rotationalRelaxation 10; rotationalRelaxation 10;
dipolePolarizability 0.897; dipolePolarizability 0.897;
tranlib ( 2 572.4 2.605 1.844 0 4 );
} }
} }
@ -1467,6 +1522,7 @@ E-
{ {
As 6.14325e-09; As 6.14325e-09;
Ts 492.739; Ts 492.739;
tranlib ( 0 498 3.59 0 0 0 );
} }
} }
@ -1492,6 +1548,7 @@ C2H3O+
Ts 256.799; Ts 256.799;
rotationalRelaxation 2; rotationalRelaxation 2;
dipolePolarizability 3.141; dipolePolarizability 3.141;
tranlib ( 2 224.7 4.162 0 0 1 );
} }
} }
@ -1517,6 +1574,7 @@ CH5O+
Ts 444.65; Ts 444.65;
rotationalRelaxation 2; rotationalRelaxation 2;
dipolePolarizability 2.462; dipolePolarizability 2.462;
tranlib ( 2 417 3.69 1.7 0 2 );
} }
} }
@ -1542,6 +1600,7 @@ O2-
Ts 146.524; Ts 146.524;
rotationalRelaxation 3.8; rotationalRelaxation 3.8;
dipolePolarizability 1.424; dipolePolarizability 1.424;
tranlib ( 1 107.4 3.458 0 1.6 3.8 );
} }
} }
@ -1567,6 +1626,7 @@ OH-
Ts 127.828; Ts 127.828;
rotationalRelaxation 0; rotationalRelaxation 0;
dipolePolarizability 1.258; dipolePolarizability 1.258;
tranlib ( 1 80 2.75 0 0 0 );
} }
} }
@ -1592,6 +1652,7 @@ CO3-
Ts 453.172; Ts 453.172;
rotationalRelaxation 0; rotationalRelaxation 0;
dipolePolarizability 2.677; dipolePolarizability 2.677;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -1617,6 +1678,7 @@ CHO2-
Ts 276.956; Ts 276.956;
rotationalRelaxation 0; rotationalRelaxation 0;
dipolePolarizability 3.345; dipolePolarizability 3.345;
tranlib ( 2 244 3.763 0 2.65 2.1 );
} }
} }
@ -1642,6 +1704,7 @@ O-
Ts 127.828; Ts 127.828;
rotationalRelaxation 0; rotationalRelaxation 0;
dipolePolarizability 1.424; dipolePolarizability 1.424;
tranlib ( 0 80 2.75 0 0 0 );
} }
} }
@ -1670,6 +1733,7 @@ CH3CO
diameter 3.97; diameter 3.97;
dipoleMoment 2.8; dipoleMoment 2.8;
dipolePolarizability 3.97; dipolePolarizability 3.97;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -1695,6 +1759,7 @@ CHO3-
Ts 453.172; Ts 453.172;
rotationalRelaxation 0; rotationalRelaxation 0;
dipolePolarizability 3.712; dipolePolarizability 3.712;
tranlib ( 2 436 3.97 0 0 2 );
} }
} }
@ -1723,6 +1788,7 @@ C2H5OH
diameter 3.69; diameter 3.69;
dipoleMoment 1.69; dipoleMoment 1.69;
dipolePolarizability 4.591; dipolePolarizability 4.591;
tranlib ( 2 417 3.69 1.69 5.11 2 );
} }
} }