cantera/src/oneD/Sim1D.cpp
2013-07-26 21:33:50 +00:00

593 lines
17 KiB
C++

/**
* @file Sim1D.cpp
*/
#include "cantera/oneD/Sim1D.h"
#include "cantera/oneD/MultiJac.h"
#include <fstream>
using namespace std;
namespace Cantera
{
static void sim1D_drawline()
{
string s(78,'.');
s += '\n';
writelog(s.c_str());
}
Sim1D::Sim1D() :
OneDim()
{
//writelog("Sim1D default constructor\n");
}
Sim1D::Sim1D(vector<Domain1D*>& domains) :
OneDim(domains)
{
// resize the internal solution vector and the work array, and perform
// domain-specific initialization of the solution vector.
m_x.resize(size(), 0.0);
m_xnew.resize(size(), 0.0);
for (size_t n = 0; n < m_nd; n++) {
domain(n)._getInitialSoln(DATA_PTR(m_x) + start(n));
domain(n).m_adiabatic=false;
}
// set some defaults
m_tstep = 1.0e-5;
//m_maxtimestep = 10.0;
m_steps.push_back(1);
m_steps.push_back(2);
m_steps.push_back(5);
m_steps.push_back(10);
}
void Sim1D::setInitialGuess(const std::string& component, vector_fp& locs, vector_fp& vals)
{
for (size_t dom=0; dom<m_nd; dom++) {
Domain1D& d = domain(dom);
size_t ncomp = d.nComponents();
for (size_t comp=0; comp<ncomp; comp++) {
if (d.componentName(comp)==component) {
setProfile(dom,comp,locs,vals);
}
}
}
}
void Sim1D::setValue(size_t dom, size_t comp, size_t localPoint, doublereal value)
{
size_t iloc = domain(dom).loc() + domain(dom).index(comp, localPoint);
AssertThrowMsg(iloc < m_x.size(), "Sim1D::setValue",
"Index out of bounds:" + int2str(iloc) + " > " +
int2str(m_x.size()));
m_x[iloc] = value;
}
doublereal Sim1D::value(size_t dom, size_t comp, size_t localPoint) const
{
size_t iloc = domain(dom).loc() + domain(dom).index(comp, localPoint);
AssertThrowMsg(iloc < m_x.size(), "Sim1D::value",
"Index out of bounds:" + int2str(iloc) + " > " +
int2str(m_x.size()));
return m_x[iloc];
}
doublereal Sim1D::workValue(size_t dom, size_t comp, size_t localPoint) const
{
size_t iloc = domain(dom).loc() + domain(dom).index(comp, localPoint);
AssertThrowMsg(iloc < m_x.size(), "Sim1D::workValue",
"Index out of bounds:" + int2str(iloc) + " > " +
int2str(m_x.size()));
return m_xnew[iloc];
}
void Sim1D::setProfile(size_t dom, size_t comp,
const vector_fp& pos, const vector_fp& values)
{
Domain1D& d = domain(dom);
doublereal z0 = d.zmin();
doublereal z1 = d.zmax();
doublereal zpt, frac, v;
for (size_t n = 0; n < d.nPoints(); n++) {
zpt = d.z(n);
frac = (zpt - z0)/(z1 - z0);
v = linearInterp(frac, pos, values);
setValue(dom, comp, n, v);
}
}
void Sim1D::save(const std::string& fname, const std::string& id,
const std::string& desc, int loglevel)
{
OneDim::save(fname, id, desc, DATA_PTR(m_x), loglevel);
}
void Sim1D::saveResidual(const std::string& fname, const std::string& id,
const std::string& desc, int loglevel)
{
vector_fp res(m_x.size(), -999);
OneDim::eval(npos, &m_x[0], &res[0], 0.0);
OneDim::save(fname, id, desc, &res[0], loglevel);
}
void Sim1D::restore(const std::string& fname, const std::string& id,
int loglevel)
{
ifstream s(fname.c_str());
if (!s)
throw CanteraError("Sim1D::restore",
"could not open input file "+fname);
XML_Node root;
root.build(s);
s.close();
XML_Node* f = root.findID(id);
if (!f) {
throw CanteraError("Sim1D::restore","No solution with id = "+id);
}
vector<XML_Node*> xd;
f->getChildren("domain", xd);
if (xd.size() != m_nd) {
throw CanteraError("Sim1D::restore", "Solution does not contain the "
" correct number of domains. Found " +
int2str(xd.size()) + "expected " +
int2str(m_nd) + ".\n");
}
size_t sz = 0;
for (size_t m = 0; m < m_nd; m++) {
if (loglevel > 0 && xd[m]->attrib("id") != domain(m).id()) {
writelog("Warning: domain names do not match: '" +
(*xd[m])["id"] + + "' and '" + domain(m).id() + "'\n");
}
sz += domain(m).nComponents() * intValue((*xd[m])["points"]);
}
m_x.resize(sz);
m_xnew.resize(sz);
for (size_t m = 0; m < m_nd; m++) {
domain(m).restore(*xd[m], DATA_PTR(m_x) + domain(m).loc(), loglevel);
}
resize();
finalize();
}
void Sim1D::setFlatProfile(size_t dom, size_t comp, doublereal v)
{
size_t np = domain(dom).nPoints();
size_t n;
for (n = 0; n < np; n++) {
setValue(dom, comp, n, v);
}
}
void Sim1D::showSolution(ostream& s)
{
for (size_t n = 0; n < m_nd; n++) {
if (domain(n).domainType() != cEmptyType) {
domain(n).showSolution_s(s, DATA_PTR(m_x) + start(n));
}
}
}
void Sim1D::showSolution()
{
for (size_t n = 0; n < m_nd; n++) {
if (domain(n).domainType() != cEmptyType) {
writelog("\n\n>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> "+domain(n).id()
+" <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<\n\n");
domain(n).showSolution(DATA_PTR(m_x) + start(n));
}
}
}
void Sim1D::getInitialSoln()
{
for (size_t n = 0; n < m_nd; n++) {
domain(n)._getInitialSoln(DATA_PTR(m_x) + start(n));
}
}
void Sim1D::finalize()
{
for (size_t n = 0; n < m_nd; n++) {
domain(n)._finalize(DATA_PTR(m_x) + start(n));
}
}
void Sim1D::setTimeStep(doublereal stepsize, size_t n, integer* tsteps)
{
m_tstep = stepsize;
m_steps.resize(n);
for (size_t i = 0; i < n; i++) {
m_steps[i] = tsteps[i];
}
}
int Sim1D::newtonSolve(int loglevel)
{
int m = OneDim::solve(DATA_PTR(m_x), DATA_PTR(m_xnew), loglevel);
if (m >= 0) {
copy(m_xnew.begin(), m_xnew.end(), m_x.begin());
return 0;
} else if (m > -10) {
return -1;
} else {
throw CanteraError("Sim1D::newtonSolve",
"ERROR: OneDim::solve returned m = " + int2str(m) + "\n");
}
}
void Sim1D::solve(int loglevel, bool refine_grid)
{
int new_points = 1;
int nsteps;
doublereal dt = m_tstep;
int soln_number = -1;
finalize();
while (new_points > 0) {
size_t istep = 0;
nsteps = m_steps[istep];
bool ok = false;
if (loglevel > 0) {
writelog("\n");
sim1D_drawline();
}
while (!ok) {
writelog("Attempt Newton solution of steady-state problem...", loglevel);
int status = newtonSolve(loglevel-1);
if (status == 0) {
if (loglevel > 0) {
writelog(" success.\n\n");
writelog("Problem solved on [");
for (size_t mm = 1; mm < nDomains(); mm+=2) {
writelog(int2str(domain(mm).nPoints()));
if (mm + 2 < nDomains()) {
writelog(", ");
}
}
writelog("] point grid(s).\n");
}
if (loglevel > 6) {
save("debug_sim1d.xml", "debug",
"After successful Newton solve");
}
if (loglevel > 7) {
saveResidual("debug_sim1d.xml", "residual",
"After successful Newton solve");
}
ok = true;
soln_number++;
} else {
char buf[100];
writelog(" failure. \n", loglevel);
if (loglevel > 6) {
save("debug_sim1d.xml", "debug",
"After unsuccessful Newton solve");
}
if (loglevel > 7) {
saveResidual("debug_sim1d.xml", "residual",
"After unsuccessful Newton solve");
}
writelog("Take "+int2str(nsteps)+" timesteps ", loglevel);
dt = timeStep(nsteps, dt, DATA_PTR(m_x), DATA_PTR(m_xnew),
loglevel-1);
if (loglevel > 6) {
save("debug_sim1d.xml", "debug", "After timestepping");
}
if (loglevel > 7) {
saveResidual("debug_sim1d.xml", "residual",
"After timestepping");
}
if (loglevel == 1) {
sprintf(buf, " %10.4g %10.4g \n", dt,
log10(ssnorm(DATA_PTR(m_x), DATA_PTR(m_xnew))));
writelog(buf);
}
istep++;
if (istep >= m_steps.size()) {
nsteps = m_steps.back();
} else {
nsteps = m_steps[istep];
}
if (dt > m_tmax) {
dt = m_tmax;
}
}
}
if (loglevel > 0) {
sim1D_drawline();
writelog("\n");
}
if (loglevel > 2) {
showSolution();
}
if (refine_grid) {
new_points = refine(loglevel);
if (new_points) {
// If the grid has changed, preemptively reduce the timestep
// to avoid multiple successive failed time steps.
dt = m_tstep;
}
if (new_points && loglevel > 6) {
save("debug_sim1d.xml", "debug", "After regridding");
}
if (new_points && loglevel > 7) {
saveResidual("debug_sim1d.xml", "residual",
"After regridding");
}
if (new_points < 0) {
writelog("Maximum number of grid points reached.");
new_points = 0;
}
} else {
writelog("grid refinement disabled.\n", loglevel);
new_points = 0;
}
}
}
int Sim1D::refine(int loglevel)
{
int ianalyze, np = 0;
vector_fp znew, xnew;
doublereal xmid, zmid;
std::vector<size_t> dsize;
for (size_t n = 0; n < m_nd; n++) {
Domain1D& d = domain(n);
Refiner& r = d.refiner();
// determine where new points are needed
ianalyze = r.analyze(d.grid().size(),
DATA_PTR(d.grid()), DATA_PTR(m_x) + start(n));
if (ianalyze < 0) {
return ianalyze;
}
if (loglevel > 0) {
r.show();
}
np += r.nNewPoints();
size_t comp = d.nComponents();
// loop over points in the current grid
size_t npnow = d.nPoints();
size_t nstart = znew.size();
for (size_t m = 0; m < npnow; m++) {
if (r.keepPoint(m)) {
// add the current grid point to the new grid
znew.push_back(d.grid(m));
// do the same for the solution at this point
for (size_t i = 0; i < comp; i++) {
xnew.push_back(value(n, i, m));
}
// now check whether a new point is needed in the
// interval to the right of point m, and if so, add
// entries to znew and xnew for this new point
if (r.newPointNeeded(m) && m + 1 < npnow) {
// add new point at midpoint
zmid = 0.5*(d.grid(m) + d.grid(m+1));
znew.push_back(zmid);
np++;
//writelog(string("refine: adding point at ")+fp2str(zmid)+"\n");
// for each component, linearly interpolate
// the solution to this point
for (size_t i = 0; i < comp; i++) {
xmid = 0.5*(value(n, i, m) + value(n, i, m+1));
xnew.push_back(xmid);
}
}
} else {
writelog("refine: discarding point at "+fp2str(d.grid(m))+"\n", loglevel);
}
}
dsize.push_back(znew.size() - nstart);
}
// At this point, the new grid znew and the new solution
// vector xnew have been constructed, but the domains
// themselves have not yet been modified. Now update each
// domain with the new grid.
size_t gridstart = 0, gridsize;
for (size_t n = 0; n < m_nd; n++) {
Domain1D& d = domain(n);
// Refiner& r = d.refiner();
gridsize = dsize[n]; // d.nPoints() + r.nNewPoints();
d.setupGrid(gridsize, DATA_PTR(znew) + gridstart);
gridstart += gridsize;
}
// Replace the current solution vector with the new one
m_x.resize(xnew.size());
copy(xnew.begin(), xnew.end(), m_x.begin());
// resize the work array
m_xnew.resize(xnew.size());
// copy(xnew.begin(), xnew.end(), m_xnew.begin());
resize();
finalize();
return np;
}
int Sim1D::setFixedTemperature(doublereal t)
{
int np = 0;
vector_fp znew, xnew;
doublereal xmid;
doublereal zfixed,interp_factor;
doublereal z1 = 0.0, z2 = 0.0, t1,t2;
size_t n, m, i;
size_t m1 = 0;
std::vector<size_t> dsize;
for (n = 0; n < m_nd; n++) {
bool addnewpt=false;
Domain1D& d = domain(n);
size_t comp = d.nComponents();
// loop over points in the current grid to determine where new point is needed.
size_t npnow = d.nPoints();
size_t nstart = znew.size();
for (m = 0; m < npnow-1; m++) {
if (value(n,2,m) == t) {
zfixed = d.grid(m);
//set d.zfixed, d.ztemp
d.m_zfixed = zfixed;
d.m_tfixed = t;
addnewpt = false;
break;
} else if ((value(n,2,m)<t) && (value(n,2,m+1)>t)) {
z1 = d.grid(m);
m1 = m;
z2 = d.grid(m+1);
t1 = value(n,2,m);
t2 = value(n,2,m+1);
zfixed = (z1-z2)/(t1-t2)*(t-t2)+z2;
//set d.zfixed, d.ztemp;
d.m_zfixed = zfixed;
d.m_tfixed = t;
addnewpt = true;
break;
//copy solution domain and push back values
}
}
for (m = 0; m < npnow; m++) {
// add the current grid point to the new grid
znew.push_back(d.grid(m));
// do the same for the solution at this point
for (i = 0; i < comp; i++) {
xnew.push_back(value(n, i, m));
}
if (m==m1 && addnewpt) {
//add new point at zfixed
znew.push_back(zfixed);
np++;
interp_factor = (zfixed-z2) / (z1-z2);
// for each component, linearly interpolate
// the solution to this point
for (i = 0; i < comp; i++) {
xmid = interp_factor*(value(n, i, m) - value(n, i, m+1)) + value(n,i,m+1);
xnew.push_back(xmid);
}
}
}
dsize.push_back(znew.size() - nstart);
}
// At this point, the new grid znew and the new solution
// vector xnew have been constructed, but the domains
// themselves have not yet been modified. Now update each
// domain with the new grid.
size_t gridstart = 0, gridsize;
for (n = 0; n < m_nd; n++) {
Domain1D& d = domain(n);
// Refiner& r = d.refiner();
gridsize = dsize[n]; // d.nPoints() + r.nNewPoints();
d.setupGrid(gridsize, DATA_PTR(znew) + gridstart);
gridstart += gridsize;
}
// Replace the current solution vector with the new one
m_x.resize(xnew.size());
copy(xnew.begin(), xnew.end(), m_x.begin());
// resize the work array
m_xnew.resize(xnew.size());
copy(xnew.begin(), xnew.end(), m_xnew.begin());
resize();
finalize();
return np;
}
void Sim1D::setAdiabaticFlame(void)
{
for (size_t n = 0; n < m_nd; n++) {
Domain1D& d = domain(n);
d.m_adiabatic=true;
}
}
void Sim1D::setRefineCriteria(int dom, doublereal ratio,
doublereal slope, doublereal curve, doublereal prune)
{
if (dom >= 0) {
Refiner& r = domain(dom).refiner();
r.setCriteria(ratio, slope, curve, prune);
} else {
for (size_t n = 0; n < m_nd; n++) {
Refiner& r = domain(n).refiner();
r.setCriteria(ratio, slope, curve, prune);
}
}
}
void Sim1D::setGridMin(int dom, double gridmin)
{
if (dom >= 0) {
Refiner& r = domain(dom).refiner();
r.setGridMin(gridmin);
} else {
for (size_t n = 0; n < m_nd; n++) {
Refiner& r = domain(n).refiner();
r.setGridMin(gridmin);
}
}
}
void Sim1D::setMaxGridPoints(int dom, int npoints)
{
if (dom >= 0) {
Refiner& r = domain(dom).refiner();
r.setMaxPoints(npoints);
} else {
for (size_t n = 0; n < m_nd; n++) {
Refiner& r = domain(n).refiner();
r.setMaxPoints(npoints);
}
}
}
doublereal Sim1D::jacobian(int i, int j)
{
return OneDim::jacobian().value(i,j);
}
void Sim1D::evalSSJacobian()
{
OneDim::evalSSJacobian(DATA_PTR(m_x), DATA_PTR(m_xnew));
}
}