/** * @file vcs_util.cpp * Internal definitions for utility functions for the VCSnonideal package */ /* * $Id$ */ /* * Copywrite (2005) Sandia Corporation. Under the terms of * Contract DE-AC04-94AL85000 with Sandia Corporation, the * U.S. Government retains certain rights in this software. */ #include #include #include #include "vcs_internal.h" using namespace std; namespace VCSnonideal { /***************************************************************************/ /***************************************************************************/ /***************************************************************************/ #ifndef USE_MEMSET void vcs_dzero(double *vector, int length) /************************************************************************** * * vcs_dzero: * * Zeroes a double vector *************************************************************************/ { int i; for (i = 0; i < length; i++) vector[i] = 0.0; } /* vcs_dzero() ***********************************************************/ #endif /***************************************************************************/ /***************************************************************************/ /***************************************************************************/ #ifndef USE_MEMSET void vcs_izero(int *vector, int length) /************************************************************************** * * vcs_izero: * * Zeroes an int vector *************************************************************************/ { int i; for (i = 0; i < length; i++) vector[i] = 0; } /* vcs_izero() ***********************************************************/ #endif /***************************************************************************/ /***************************************************************************/ /***************************************************************************/ #ifndef USE_MEMSET void vcs_dcopy(double *vec_to, double *vec_from, int length) /************************************************************************** * * vcs_dcopy: * * Copies a double vector ***************************************************************************/ { int i; for (i = 0; i < length; i++) vec_to[i] = vec_from[i]; } /* vcs_dzero() *************************************************************/ #endif /*****************************************************************************/ /*****************************************************************************/ /*****************************************************************************/ #ifndef USE_MEMSET void vcs_icopy(int *vec_to, int *vec_from, int length) /************************************************************************** * * vcs_icopy: * * copies an int vector ***************************************************************************/ { int i; for (i = 0; i < length; i++) vec_to[i] = vec_from[i]; } /* vcs_dzero() *************************************************************/ #endif /*****************************************************************************/ /*****************************************************************************/ /*****************************************************************************/ #ifndef USE_MEMSET /* * vcs_vdzero * * zeroes a double vector */ void vcs_vdzero(std::vector &vvv, int len) { if (len < 0) { std::fill(vvv.begin(), vvv.end(), 0.0); } else { std::fill_n(vvv.begin(), len, 0.0); } } #endif /*****************************************************************************/ /*****************************************************************************/ /*****************************************************************************/ #ifndef USE_MEMSET /* * vcs_vizero * * zeroes a double vector */ void vcs_vizero(std::vector &vvv, int len) { if (len < 0) { std::fill(vvv.begin(), vvv.end(), 0.0); } else { std::fill_n(vvv.begin(), len, 0.0); } } #endif #ifndef USE_MEMSET /* * vcs_vdcopy * * copies a vector of doubles to another vector of doubles * * @param vec_to Vector to be copied to * @param vec_from Vector to be copied from * @param length Length of the copy */ void vcs_vdcopy(std::vector &vec_to, const std::vector & vec_from, int length) { std::copy(vec_from.begin(), vec_from.begin() + length, vec_to.begin()); } #endif #ifndef USE_MEMSET /* * vcs_vicopy * * copies a vector to another vector * * @param vec_to Vector to be copied to * @param vec_from Vector to be copied from * @param length Length of the copy */ void vcs_vicopy(std::vector &vec_to, const std::vector & vec_from, int length) { std::copy(vec_from.begin(), vec_from.begin() + length, vec_to.begin()); } #endif /* * * Finds the location of the maximum component in a double vector * INPUT * x(*) - Vector to search * xSize(*) if nonnull, this is the multiplier vector to be * multiplied into x(*) before making the decision. * j <= i < n : i is the range of indecises to search in X(*) * * RETURN * return index of the greatest value on X(*) searched */ int vcs_optMax(const double *x, const double * xSize, int j, int n) { int i; int largest = j; double big = x[j]; if (xSize) { assert(xSize[j] > 0.0); big *= xSize[j]; for (i = j + 1; i < n; ++i) { assert(xSize[i] > 0.0); if ((x[i]*xSize[i]) > big) { largest = i; big = x[i]*xSize[i]; } } } else { for (i = j + 1; i < n; ++i) { if (x[i] > big) { largest = i; big = x[i]; } } } return largest; } int vcs_max_int(const int *vector, int length) /************************************************************************** * * vcs_max_int: * * returns the maximum integer in a list. ***************************************************************************/ { int i, retn; if (vector == NULL || length <= 0) return 0; retn = vector[0]; for (i = 1; i < length; i++) { retn = MAX( retn, vector[i]); } return retn; } /*****************************************************************************/ /*****************************************************************************/ /*****************************************************************************/ // Swap values in a std vector string /* * Switches the value of vecStrings[i1] with vecStrings[i2] * * @param vecStrings Vector of integers * @param i1 first index * @param i2 second index */ void vcsUtil_stsw(std::vector & vstr, int i1, int i2) { std::string tmp(vstr[i2]); vstr[i2] = vstr[i1]; vstr[i1] = tmp; } // Swap values in vector of doubles /* * Switches the value of x[i1] with x[i2] * * @param x Vector of doubles * @param i1 first index * @param i2 second index */ void vcsUtil_dsw(double x[], int i1, int i2) { double t = x[i1]; x[i1] = x[i2]; x[i2] = t; } // Swap values in an integer array /* * Switches the value of x[i1] with x[i2] * * @param x Vector of integers * @param i1 first index * @param i2 second index */ void vcsUtil_isw(int x[], int i1, int i2) { int t = x[i1]; x[i1] = x[i2]; x[i2] = t; } // Invert an n x n matrix and solve m rhs's /* * Solve a square matrix with multiple right hand sides * * \f[ * C X + B = 0; * \f] * * This routine uses Gauss elimination and is optimized for the solution * of lots of rhs's. A crude form of row pivoting is used here. * The matrix C is destroyed. * * @return Routine returns an integer representing success: * - 1 : Matrix is singluar * - 0 : solution is OK * The solution x[] is returned in the matrix b. * * @param c Matrix to be inverted. c is in fortran format, i.e., rows * are the inner loop. Row numbers equal to idem. * c[i+j*idem] = c_i_j = Matrix to be inverted: i = row number * j = column number * @param idem number of row dimensions in c * @param n Number of rows and columns in c * @param b Multiple RHS. Note, b is actually the negative of * most formulations. Row numbers equal to idem. * b[i+j*idem] = b_i_j = vectors of rhs's: i = row number * j = column number * (each column is a new rhs) * @param m number of rhs's */ int vcsUtil_mlequ(double *c, int idem, int n, double *b, int m) { int i, j, k, l; double R; if (n > idem || n <= 0) { plogf("vcsUtil_mlequ ERROR: badly dimensioned matrix: %d %d\n", n, idem); return 1; } /* * Loop over the rows * -> At the end of each loop, the only nonzero entry in the column * will be on the diagonal. We can therfore just invert the * diagonal at the end of the program to solve the equation system. */ for (i = 0; i < n; ++i) { if (c[i + i * idem] == 0.0) { /* * Do a simple form of row pivoting to find a non-zero pivot */ for (k = i + 1; k < n; ++k) { if (c[k + i * idem] != 0.0) goto FOUND_PIVOT; } plogf("vcsUtil_mlequ ERROR: Encountered a zero column: %d\n", i); return 1; FOUND_PIVOT: ; for (j = 0; j < n; ++j) c[i + j * idem] += c[k + j * idem]; for (j = 0; j < m; ++j) b[i + j * idem] += b[k + j * idem]; } for (l = 0; l < n; ++l) { if (l != i && c[l + i * idem] != 0.0) { R = c[l + i * idem] / c[i + i * idem]; c[l + i * idem] = 0.0; for (j = i+1; j < n; ++j) c[l + j * idem] -= c[i + j * idem] * R; for (j = 0; j < m; ++j) b[l + j * idem] -= b[i + j * idem] * R; } } } /* * The negative in the last expression is due to the form of B upon * input */ for (i = 0; i < n; ++i) { for (j = 0; j < m; ++j) { b[i + j * idem] = -b[i + j * idem] / c[i + i*idem]; } } return 0; } // Returns the value of the gas constant in the units specified by a parameter /* * @param mu_units Specifies the units. * - VCS_UNITS_KCALMOL: kcal gmol-1 K-1 * - VCS_UNITS_UNITLESS: 1.0 K-1 * - VCS_UNITS_KJMOL: kJ gmol-1 K-1 * - VCS_UNITS_KELVIN: 1.0 K-1 * - VCS_UNITS_MKS: joules kmol-1 K-1 = kg m2 s-2 kmol-1 K-1 */ double vcsUtil_gasConstant(int mu_units) { double r; switch (mu_units) { case VCS_UNITS_KCALMOL: r = 0.008314472/4.184; break; case VCS_UNITS_UNITLESS: r = 1.0; break; case VCS_UNITS_KJMOL: r = 0.008314472; break; case VCS_UNITS_KELVIN: r = 1.0; break; case VCS_UNITS_MKS: /* joules / kg-mol K = kg m2 / s2 kg-mol K */ r = 8.314472E3; break; default: plogf("vcs_gasConstant error: uknown units: %d\n", mu_units); exit(-1); } return r; } void vcs_print_line(const char *string, int num) /************************************************************************** * * vcs_print_char: * * Print a line consisting of a multiple of the same string * ***************************************************************************/ { if (string) { for (int j = 0; j < num; j++) plogf("%s", string); } plogendl(); } /***************************************************************************/ /************************************************************************ **/ /************************************************************************ **/ void vcs_print_stringTrunc(const char *str, int space, int alignment) /*********************************************************************** * vcs_print_stringTrunc(): * * Print a string within a given space limit. This routine * limits the amount of the string that will be printed to a * maximum of "space" characters. * * str = String -> must be null terminated. * space = space limit for the printing. * alignment = 0 centered * 1 right aligned * 2 left aligned ***********************************************************************/ { int i, ls=0, rs=0; int len = strlen(str); if ((len) >= space) { for (i = 0; i < space; i++) { plogf("%c", str[i]); } } else { if (alignment == 1) { ls = space - len; } else if (alignment == 2) { rs = space - len; } else { ls = (space - len) / 2; rs = space - len - ls; } if (ls != 0) { for (i = 0; i < ls; i++) plogf(" "); } plogf("%s", str); if (rs != 0) { for (i = 0; i < rs; i++) plogf(" "); } } } /*****************************************************************************/ /*****************************************************************************/ /*****************************************************************************/ bool vcs_doubleEqual(double d1, double d2) /************************************************************************* * vcs_doubleEqual() * * Simple routine to check whether two doubles are equal up to * roundoff error. Currently it's set to check for 10 digits of * accuracy. *************************************************************************/ { double denom = fabs(d1) + fabs(d2) + 1.0; double fac = fabs(d1 - d2) / denom; if (fac > 1.0E-10) { return false; } return true; } }