function nu = stoich_net(a, species, rxns) % STOICH_NET Get the net stoichiometric coefficients. % nu = stoich_net(a,species,rxns) % % See also: :mat:func:`stoich_r`, :mat:func:`stoich_p` % % :param a: % Instance of class :mat:func:`Kinetics` (or another % object deriving from Kinetics) % for which the net stoichiometric coefficients are desired. % :param species: % Species indices for which net stoichiometric coefficients % should be retrieved. Optional argument; if specified, ``rxns`` % must be specified as well. % :param rxns: % Reaction indices for which net stoichiometric coefficients % should be retrieved. Optional argument; if specified, ``species`` % must be specified as well. % :return: % Returns a sparse matrix of all net stoichiometric % coefficients. The matrix element ``nu(k,i)`` is the % stoichiometric coefficient of species k as a net in % reaction i. If ``species`` and ``rxns`` are specified, the matrix % will contain only entries for the specified species and % reactions. For example, ``stoich_p(a,3,[1 3 5 7])`` returns a % sparse matrix containing only the coefficients for species 3 % in reactions 1, 3, 5, and 7. % if nargin == 1 nu = stoich_p(a) - stoich_r(a); elseif nargin == 3 nu = stoich_p(a, species, rxns) - stoich_r(a, species, rxns); else error(['stoich_net requires 1 or 3 arguments.']) end