2006-07-04 03:11 hkmoffa * test_problems/cathermo/: Makefile.in, testWaterTP/.cvsignore, testWaterTP/Makefile.in, testWaterTP/README, testWaterTP/output_blessed.txt, testWaterTP/runtest, testWaterTP/testWaterTP.cpp, testWaterTP/waterTPphase.xml: Added a test for WaterTP 2006-07-04 03:04 hkmoffa * configure, configure.in: Added another test directory. 2006-07-04 03:04 hkmoffa * test_problems/cathermo/: Makefile.in, testWaterPDSS/.cvsignore, testWaterPDSS/Makefile.in, testWaterPDSS/output_blessed.txt, testWaterPDSS/runtest, testWaterPDSS/testWaterPDSS.cpp: Added a test for WaterPDSS object. 2006-07-04 02:41 hkmoffa * configure, configure.in: Added a couple more tests for electrochemistry. 2006-07-04 02:40 hkmoffa * test_problems/cathermo/Makefile.in: Added another test. 2006-07-04 02:39 hkmoffa * test_problems/cathermo/testIAPWSTripP/: .cvsignore, Makefile.in, README, output_blessed.txt, runtest, testTripleP.cpp: Triple point calcultion test routine. 2006-07-04 02:32 hkmoffa * test_problems/cathermo/testIAPWSPres/: .cvsignore, Makefile.in, README, output_blessed.txt, runtest, testPress.cpp: Second test. 2006-07-04 02:21 hkmoffa * test_problems/cathermo/: Makefile.in, testIAPWS/.cvsignore, testIAPWS/Makefile.in, testIAPWS/README, testIAPWS/output_blessed.txt, testIAPWS/runtest, testIAPWS/testIAPWSphi.cpp: Added the first test for IAPWS 2006-07-04 02:01 hkmoffa * Cantera/src/thermo/: IdealMolalSoln.cpp, Makefile.in, PDSS.cpp, PDSS.h, WaterPDSS.cpp, WaterPDSS.h, WaterProps.cpp, WaterProps.h, WaterPropsIAPWS.cpp, WaterPropsIAPWS.h, WaterPropsIAPWSphi.cpp, WaterPropsIAPWSphi.h, WaterTP.cpp, WaterTP.h: First commit of water properties routines. These are under-the-hood routines for calculation of water electrolyte thermochemistry. 2006-07-03 21:59 hkmoffa * test_problems/Makefile.in: Added a new test directory. 2006-07-03 21:58 hkmoffa * test_problems/negATest/: .cvsignore, Makefile.in, negATest.cpp, negATest_blessed.out, noxNeg.cti, noxNeg.xml, runtest: Added a new test that captures negative A factors. 2006-07-03 21:57 hkmoffa * configure, configure.in: Added a new test. 2006-07-03 21:57 hkmoffa * Cantera/src/: RateCoeffMgr.h, RxnRates.h: Fix for negative pre-exponential factors producing NaN rates of progress. This bug was reported in the Cantera newsgroup. The fix consists of replacing Rc = exp ( mlogA + blogT - Ea / RT) with Rc = A * exp (b logT - Ea/RT) Therefore, the log of A never has to be taken. Note, this also allows for a zero rate of progress for a reaction. Consequences: The permissible range of the rate constant values may be altered. Numerical roundoff differences will occur, since the order of operations in key rate constant evalulations has been changed. Speed of the calculation may be affected. I have no idea which way. The fix should be considered as provisional. There are different pathways for fixing this. This is merely the simplest. 2006-07-03 21:41 hkmoffa * Cantera/src/importCTML.cpp: Added a couple of comments. 2006-06-24 01:23 hkmoffa * Makefile.in: python=minimal fixes on cygwin 2006-06-23 23:04 hkmoffa * examples/cxx/: .cvsignore, gri30.xml, kinetics_example1.cpp: Added gri30.xml, so this example will work under the none python option. 2006-06-23 23:01 hkmoffa * test_problems/cathermo/Makefile.in: Fixed an error in the clean rule. 2006-06-23 22:35 hkmoffa * Cantera/src/: Phase.h, ThermoPhase.h: Doxygen fixes. 2006-06-23 22:33 hkmoffa * tools/doc/: .cvsignore, Cantera.cfg.in, doxyinput/cxx-setup.txt, doxyinput/equildemo.txt, doxyinput/thermodemo.txt, doxyinput/winbuild.txt, html/.cvsignore: Additions to doxygen documentation. Fixes to doxygen docs -> eliminated all of the warnings and ommitted pages. 2006-06-23 22:31 hkmoffa * Cantera/src/thermo/: IdealMolalSoln.cpp, IdealMolalSoln.h, IdealSolidSolnPhase.cpp, IdealSolidSolnPhase.h, MolalityVPSSTP.h: Doxygen formatting changes. 2006-06-23 16:31 dggoodwin * Cantera/cxx/demos/combustor.cpp: added C++ combustor example 2006-06-23 16:28 dggoodwin * Cantera/python/examples/reactors/combustor.py: added combustor example 2006-06-22 17:10 hkmoffa * test_problems/fracCoeff/: .cvsignore, frac.xml: Added frac.xml, since this is now a required file. 2006-06-22 15:47 hkmoffa * configure, configure.in: Fixed an error in figuring out what time stamp program, tscompare, works on the current system. 2006-06-22 15:43 hkmoffa * test_problems/diamondSurf/: .cvsignore, diamond.xml: Added the diamond.xml file. It's now a prerequisite towards running the problem. 2006-06-21 02:00 hkmoffa * examples/cxx/equil_example1.cpp: Replaced silane.cti with silane.xml so that it will work for python none installation. 2006-06-21 01:52 hkmoffa * test_problems/cxx_ex/runtest: Commented out CANTERA_DATA statement. On the x86-linux1 cf machine, this was causing the test to crash for some reason. 2006-06-21 01:16 hkmoffa * test_problems/cathermo/ims/output_blessed.txt: Took out spurious output from the blessed file. 2006-06-21 01:15 hkmoffa * Cantera/src/thermo/IdealMolalSoln.cpp: Took out a spurious print statement. 2006-06-21 01:11 hkmoffa * test_problems/fracCoeff/: fracCoeff.cpp, runtest: Made this test work for python=none. 2006-06-21 01:04 hkmoffa * configure.in: Added a few directories: min_python 2006-06-21 01:03 hkmoffa * test_problems/: Makefile.in, min_python/.cvsignore, min_python/Makefile.in, min_python/minDiamond/.cvsignore, min_python/minDiamond/Makefile.in, min_python/minDiamond/diamond.cti, min_python/minDiamond/diamond_blessed.xml, min_python/minDiamond/runDiamond.cpp, min_python/minDiamond/runDiamond_blessed.out, min_python/minDiamond/run_diamond.py, min_python/minDiamond/runtest, min_python/minDiamond/tdia_a.py: First cut at getting rid of the false bad test results for the python = none option. min_python dir will include the minimal python installation tests 2006-06-21 00:48 hkmoffa * test_problems/diamondSurf/: diamond.cti, runDiamond.cpp, runtest: changed the input file to diamond.xml, so that python="none" installations will pass this test. 2006-06-21 00:36 hkmoffa * test_problems/surfkin/surfdemo.cpp: Changed surfdemo.cpp to read gri30.xml. Thus, this test will pass if python option is set to none. 2006-06-20 23:58 hkmoffa * configure.in, preconfig: Changed NUMARRAY_HOME so that it doesn't have a default in preconfig. NUMARRAY_INC_DIR is now constructed from NUMARRAY_HOME in the following prioritized way depending upon the existance of directories: NUMARRAY_INC_DIR=$NUMARRAY_HOME/include/python2.4 NUMARRAY_INC_DIR=$NUMARRAY_HOME/include/python2.3 NUMARRAY_INC_DIR=$NUMARRAY_HOME/include/python Additionally, NUMARRAY_INC_DIR can now be input directly. NUMARRAY_HOME is only used to set NUMARRAY_INC_DIR. Note, the new method now conforms to what the numarray installer actually does. 2006-06-20 15:56 hkmoffa * tools/testtools/csvdiff.cpp: Fixed compilation of this on a linux platform in the compile farm. Didn't like declarations in a switch statement. 2006-06-20 01:25 hkmoffa * tools/doc/: .cvsignore, Cantera.cfg, Cantera.cfg.in, Makefile.in, README, html/.cvsignore: Makde Cantera.cfg a configurable file. Previously there were several hard coded paths in the file. 2006-06-20 01:21 hkmoffa * configure.in, preconfig: Added the GRAPHVIZDIR variable to the configure script. This is used to locate the dot executable, when using doxygen. 2006-06-20 01:19 hkmoffa * test_problems/cathermo/Makefile.in: Added a new test, ims. 2006-06-20 01:19 hkmoffa * test_problems/cathermo/ims/: .cvsignore, IMSTester.cpp, Makefile.in, WaterPlusSolutes.xml, output_blessed.txt, runtest: Added a new test. 2006-06-20 01:15 hkmoffa * Cantera/src/: global.h, misc.cpp: Reduced the number of doxygen error messages. 2006-06-20 01:14 hkmoffa * Cantera/src/thermo/: IdealMolalSoln.cpp, IdealMolalSoln.h, Makefile.in, MolalityVPSSTP.cpp, MolalityVPSSTP.h: Added an IdealMolalSoln object. 2006-06-19 16:35 hkmoffa * Cantera/cxx/demos/: .cvsignore, Makefile.in: Added a .depends rule 2006-06-13 19:06 hkmoffa * Cantera/src/xml.cpp: changed the write_int() routine to produce prettier output. 2006-06-13 19:04 hkmoffa * Cantera/src/: ctml.h, ctml.cpp: Added comments to addFloatArray() Corrected comments for procedure getInteger() getFloatArray(): Added XML name checking. The default name is still "getFloatArray". However, now other XML names are acceptable. Changed atof() calls to atofCheck() Changed the code so that a comma can be the last non-spaced character in the value field. 2006-06-13 18:11 hkmoffa * config.h.in, configure.in, preconfig: Added support for conditional use of ideal solid solutions. 2006-06-13 18:09 hkmoffa * test_problems/cathermo/issp/: .cvsignore, ISSPTester.cpp, IdealSolidSolnPhaseExample.xml, Makefile.in, output_blessed.txt, runtest: Added a test problem for ideal solid solutions. 2006-06-13 18:07 hkmoffa * test_problems/cathermo/: .cvsignore, Makefile.in: Added makefiles. 2006-06-13 18:06 hkmoffa * test_problems/Makefile.in: Added a cathermo test directory. 2006-06-13 18:05 hkmoffa * Cantera/src/Makefile.in: Added support for conditional compilation of thermo directory. 2006-06-13 18:04 hkmoffa * Cantera/src/importCTML.cpp: Changed importPhase to call initThermoXML, not initThermo at the end of its execution. 2006-06-13 18:03 hkmoffa * Cantera/src/State.h: Changed a few functions to be virtual, in order to support incompressible equations of state. 2006-06-13 18:02 hkmoffa * Cantera/src/thermo/: IdealSolidSolnPhase.cpp, IdealSolidSolnPhase.h, Makefile.in, MolalityVPSSTP.cpp, MolalityVPSSTP.h, VPStandardStateTP.cpp, VPStandardStateTP.h: Added an IdealSolidSolnPhase capability. Changed existing thermo files to use initThermoXML(). 2006-06-13 17:26 hkmoffa * tools/testtools/csvdiff.cpp: Added an atol and rtol command-line capability. It also does more for comparisons with unequal rows. 2006-06-13 02:57 hkmoffa * Cantera/src/InterfaceKinetics.h: Fixed a typo 2006-06-13 02:24 hkmoffa * Cantera/src/LatticeSolidPhase.h: Fixed an error mentioned in the Cantera newsgroup. 2006-06-13 02:20 hkmoffa * Cantera/src/ThermoPhase.h: Added the function getPartialMolarCp(). It isn't currently in the API, but it should be. 2006-06-13 02:19 hkmoffa * Cantera/src/Elements.cpp: Fixed a minor case which resulted in a core dump. 2006-06-11 13:36 dggoodwin * Cantera/python/examples/flames/fixed_T_flame.py: minor changes 2006-06-10 19:15 dggoodwin * Cantera/python/examples/flames/: tdata.csv, tdata.dat: changed tdata.csv to tdata.dat 2006-06-10 19:07 dggoodwin * Cantera/python/examples/flames/: fixed_T_flame.py, tdata.csv: added fixed T flame example 2006-06-08 16:05 hkmoffa * Cantera/src/StoichSubstance.h: Fixed a typo and added getStandardVolumes() routine. 2006-05-31 20:06 dggoodwin * configure, configure.in, Cantera/python/ctml_writer.py: added LatticePhase to configure.in 2006-05-28 01:34 hkmoffa * Cantera/src/SpeciesThermoFactory.cpp: used popError() on two cases where errors are caught and delt with. 2006-05-17 19:43 dggoodwin * configure.in, preconfig, ext/f2c_libs/Makefile.in, ext/f2c_libs/arith.h: misc 2006-05-17 17:59 dggoodwin * examples/cxx/kinetics_example3.cpp: initial import 2006-05-17 17:16 dggoodwin * Cantera/src/zeroD/: ReactorFactory.cpp, ReactorFactory.h: initial import 2006-05-07 23:17 dggoodwin * Cantera/clib/src/ctreactor.cpp: added support for const pressure and flow reactors 2006-05-06 17:34 dggoodwin * Cantera/: clib/src/ctreactor.cpp, cxx/include/zerodim.h, python/Cantera/Reactor.py, src/CVodesIntegrator.cpp, src/CVodesIntegrator.h, src/FuncEval.h, src/Makefile.in, src/Mu0Poly.h, src/NasaPoly1.h, src/ShomatePoly.h, src/StoichManager.h, src/importCTML.h, src/transport/MixTransport.cpp: support for constant-pressure reactors 2006-05-06 17:32 dggoodwin * Cantera/python/examples/reactors/piston.py: initial import 2006-05-06 16:56 dggoodwin * Cantera/src/zeroD/: ConstPressureReactor.cpp, ConstPressureReactor.h, FlowReactor.cpp, Reactor.cpp, Reactor.h, ReactorBase.cpp, ReactorBase.h: added constant pressure reactor 2006-05-04 04:13 dggoodwin * configure, test_problems/Makefile.in, tools/src/finish_install.py.in: support for Python-free environments 2006-05-03 22:49 dggoodwin * Cantera/src/ct2ctml.cpp: Windows has no sleep command 2006-05-03 21:45 dggoodwin * Cantera/: clib/src/ct.cpp, clib/src/ct.h, python/src/ctthermo_methods.cpp, python/ctml_writer.py, python/Cantera/Interface.py, python/Cantera/ThermoPhase.py, src/GeneralSpeciesThermo.cpp, src/GeneralSpeciesThermo.h, src/Mu0Poly.cpp, src/NasaThermo.h, src/SpeciesThermo.h, src/SpeciesThermoFactory.cpp, src/SpeciesThermoFactory.h, src/SpeciesThermoInterpType.h, src/State.cpp, src/State.h, src/thermo/MolalityVPSSTP.cpp, src/thermo/VPStandardStateTP.cpp, src/transport/TransportBase.h: added electric potential 2006-05-03 20:12 hkmoffa * examples/cxx/equil_example1.cpp: Changed the initial condition slightly. This was to avoid a problem with convergence that occurred in the chemical equilibrium solver. 2006-05-03 20:07 hkmoffa * test_problems/cxx_ex/: eq1_blessed.csv, eq1_blessed.dat: Rebaselined the blessed state, due to a small change in initial conditions. 2006-05-03 11:51 dggoodwin * configure.in: moved uname -i statement 2006-05-02 01:04 dggoodwin * Cantera/matlab/cantera/: @ThermoPhase/setElectricPotential.m, @ThermoPhase/electricPotential.m, importEdge.m: initial import 2006-05-02 01:03 dggoodwin * Cantera/matlab/cantera/private/thermomethods.cpp: added functions to set and get the electric potential of a phase 2006-05-02 00:36 hkmoffa * configure.in: Added the ext/recipes/Makefile file to the list of makefiles. Somehow, it wasn't in the list. 2006-05-01 17:51 hkmoffa * Makefile.in: Tracked down a bug in the make system to cxxlib. Need to make all at the Cantera/cxx level in order to copy include files over to the build/include directory tree. 2006-05-01 01:43 hkmoffa * .cvsignore: Added some config log files to this file. 2006-05-01 01:29 hkmoffa * bin/: tscompare, tscompare_alwaystrue, tscompare_csh, tscompare_ksh, tscompare_sh: Added tscompare files. 2006-05-01 01:14 hkmoffa * examples/cxx/Makefile.in: Solaris port: added SunWS_cache to clean rule 2006-05-01 01:13 hkmoffa * tools/testtools/Makefile.in: Took out extraneous statements. 2006-05-01 01:13 hkmoffa * tools/src/Makefile.in: Solaris port commits. 2006-05-01 01:11 hkmoffa * ext/f2c_libs/Makefile.in: Solaris changes. 2006-05-01 01:10 hkmoffa * Cantera/python/: Makefile.in, ctml_writer.py, setup.py.in: Solaris port changes. 2006-05-01 01:09 hkmoffa * bin/install_tsc.in: changed INSTALL to INSTALL_abs 2006-05-01 01:08 hkmoffa * .cvsignore: Added files. 2006-05-01 01:07 hkmoffa * configure, Cantera.README, Makefile.in, config.h.in, configure.in, preconfig: Solaris Port: the config/configure.in file has been pushed up one directory. The previous configure file is now called preconfig. 2006-05-01 01:03 hkmoffa * config/install-sh: Solaris port: Changing directory structure to put configure.in in top directory. 2006-05-01 00:33 hkmoffa * ext/Makefile.in: Added recipes to clean directories. 2006-05-01 00:32 hkmoffa * ext/f2c_lapack/Makefile.in: Took out duplicates. 2006-05-01 00:23 hkmoffa * Cantera/: cxx/demos/.cvsignore, fortran/src/.cvsignore: Added SunWS_cache 2006-05-01 00:22 hkmoffa * Cantera/clib/src/.cvsignore: Added SuNWS_cache 2006-05-01 00:20 hkmoffa * Cantera/cxx/Makefile.in: Fixed an error in INCDIR definition. 2006-05-01 00:17 hkmoffa * Cantera/cxx/include/: IdealGasMix.h, PureFluid.h: Made ready() a const function, 2006-05-01 00:15 hkmoffa * Cantera/fortran/src/Makefile.in: Solaris: SunWS_cache handling 2006-05-01 00:13 hkmoffa * Cantera/cxx/demos/Makefile.in: Solaris changes 2006-05-01 00:10 hkmoffa * Cantera/cxx/src/: .cvsignore, Makefile.in: Solaris changes SunWS_cache handling 2006-05-01 00:08 hkmoffa * Cantera/src/ct_defs.h: Changed math.h to cmath 2006-05-01 00:08 hkmoffa * Cantera/: src/.cvsignore, clib/src/Makefile.in: Added SunWS_cache 2006-05-01 00:07 hkmoffa * Cantera/src/CVode.cpp: Added Id line 2006-05-01 00:05 hkmoffa * Cantera/src/ct2ctml.cpp: More sleep commands needed for system calls for solaris 2006-05-01 00:03 hkmoffa * Cantera/src/stringUtils.cpp: don't need ctypes.h 2006-05-01 00:00 hkmoffa * Cantera/src/converters/: Makefile.in, ck2ct.cpp, ck2ct.h: Solaris changes: use cstdlib not stdlib.h 2006-04-30 23:43 hkmoffa * test_problems/: surfkin/.cvsignore, surfkin/Interface.h, surfkin/Makefile.in, silane_equil/.cvsignore, silane_equil/IdealGasMix.h: Solaris changes. 2006-04-30 23:37 hkmoffa * test_problems/diamondSurf/run_diamond.py: Fixed typo. 2006-04-30 23:36 hkmoffa * test_problems/diamondSurf/: .cvsignore, Makefile.in: Additions for solaris. 2006-04-30 23:20 hkmoffa * Cantera/src/Makefile.in: Added the logger.h file. 2006-04-30 22:21 hkmoffa * ext/Makefile.in: Uses the build_f2c_lib variable. 2006-04-30 21:58 hkmoffa * Cantera/cxx/include/Cantera.h: Added logger.h to this file. 2006-04-30 21:57 hkmoffa * Cantera/cxx/include/GRI30.h: Changed the #ifndef line so that it is unique. 2006-04-30 21:56 hkmoffa * Cantera/cxx/include/kinetics.h: Added a couple more include kinetics files. 2006-04-30 21:54 hkmoffa * Cantera/cxx/include/thermo.h: Changed a comments section. 2006-04-30 21:54 hkmoffa * Cantera/cxx/include/PureFluid.h: Added Id field. 2006-04-30 20:08 hkmoffa * .cvsignore: Added the file set_cant_env 2006-04-30 20:06 hkmoffa * test_problems/: Makefile.in, cxx_ex/Makefile.in, fracCoeff/.cvsignore, fracCoeff/Makefile.in, fracCoeff/frac.cti, fracCoeff/fracCoeff.cpp, fracCoeff/frac_blessed.out, fracCoeff/frac_blessed.xml, fracCoeff/runtest: Added a new test that pretty much mimics the frac python test. It does add tests for the calculation of equilibrium constants for fractional coefficient reactions. 2006-04-30 20:01 hkmoffa * Cantera/src/: EdgeKinetics.cpp, GasKinetics.cpp, GasKinetics.h, InterfaceKinetics.cpp, Kinetics.h, Phase.cpp: Fixed an error in the GasKinetics object that occurred for calculating equilibrium constants for reactions with fractional stoichiometric coefficients. The member data m_dn[] was being calculated incorrectly for theses cases and then used in the calculation of the equilibrium constant. m_dn[] now correctly evaluates the difference in rxn order between the reactants and products for fraction coefficient reactions. 2006-04-30 02:14 dggoodwin * Makefile.in, configure, config/configure.in: added capability to build without Python. Features requiring Python in the build process (Python and MATLAB interfaces) are skipped, and Python tests are skipped also. 2006-04-29 12:45 dggoodwin * Cantera/src/thermo/: MolalityVPSSTP.cpp, MolalityVPSSTP.h, SingleSpeciesTP.cpp, VPStandardStateTP.cpp, VPStandardStateTP.h: changed from using ctvector to using std::vector. Required replacing v.begin() in many places by &v[0]. Macro DATA_PTR(v) defined for readability. 2006-04-28 19:22 dggoodwin * Cantera/cxx/demos/flamespeed.cpp, Cantera/cxx/src/cxxutils.cpp, Cantera/src/Array.h, Cantera/src/BandMatrix.cpp, Cantera/src/CVodesIntegrator.cpp, Cantera/src/ChemEquil.cpp, Cantera/src/ConstDensityThermo.cpp, Cantera/src/DenseMatrix.cpp, Cantera/src/EdgeKinetics.cpp, Cantera/src/EdgeKinetics.h, Cantera/src/GRI_30_Kinetics.cpp, Cantera/src/GRI_30_Kinetics.h, Cantera/src/GasKinetics.cpp, Cantera/src/GasKinetics.h, Cantera/src/Group.h, Cantera/src/IdealGasPhase.cpp, Cantera/src/IdealGasPhase.h, Cantera/src/ImplicitSurfChem.cpp, Cantera/src/InterfaceKinetics.cpp, Cantera/src/InterfaceKinetics.h, Cantera/src/LatticeSolidPhase.cpp, Cantera/src/Makefile.in, Cantera/src/Mu0Poly.cpp, Cantera/src/MultiPhase.cpp, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/NasaPoly2.h, Cantera/src/NasaThermo.h, Cantera/src/Phase.cpp, Cantera/src/ReactionPath.cpp, Cantera/src/ShomatePoly.h, Cantera/src/ShomateThermo.h, Cantera/src/SpeciesThermoFactory.cpp, Cantera/src/State.cpp, Cantera/src/State.h, Cantera/src/StoichSubstance.cpp, Cantera/src/SurfPhase.cpp, Cantera/src/ct_defs.h, Cantera/src/funcs.cpp, Cantera/src/importCTML.cpp, Cantera/src/phasereport.cpp, Cantera/src/utilities.h, Cantera/src/converters/Makefile.in, Cantera/src/converters/ckr_defs.h, Cantera/src/oneD/Domain1D.h, Cantera/src/oneD/MultiJac.cpp, Cantera/src/oneD/MultiNewton.cpp, Cantera/src/oneD/OneDim.cpp, Cantera/src/oneD/Sim1D.cpp, Cantera/src/oneD/Sim1D.h, Cantera/src/oneD/StFlow.cpp, Cantera/src/oneD/boundaries1D.cpp, Cantera/src/transport/DustyGasTransport.cpp, Cantera/src/transport/MMCollisionInt.cpp, Cantera/src/transport/Makefile.in, Cantera/src/transport/MixTransport.cpp, Cantera/src/transport/MultiTransport.cpp, Cantera/src/transport/TransportFactory.cpp, Cantera/src/zeroD/FlowReactor.cpp, Cantera/src/zeroD/Reactor.cpp, Cantera/src/zeroD/ReactorBase.h, Cantera/src/zeroD/ReactorNet.cpp, Cantera/src/zeroD/Wall.cpp, test_problems/surfkin/surfdemo.cpp, Cantera/src/CVode.cpp: changed from using ctvector to using std::vector. Required replacing v.begin() in many places by &v[0]. Macro DATA_PTR(v) defined for readability. 2006-04-28 00:47 hkmoffa * Cantera/src/CVode.cpp: Took out 2 print statements, that was causing the diamond test to fail. 2006-04-27 23:39 hkmoffa * configure: Changed the environmental variable, WITH_ELECTROLYTES, so that it can be set from a preconfig routine. 2006-04-25 11:52 dggoodwin * Cantera/src/Array.h: changed doublereal* to iterator in axpy 2006-04-23 09:27 dggoodwin * Cantera/python/Cantera/Edge.py: initial import 2006-04-23 09:24 dggoodwin * Cantera/src/oneD/Makefile.in: added missing Domain1D.cpp 2006-04-23 08:41 dggoodwin * config/: configure, configure.in: cleaned up configure.in 2006-04-19 22:46 hkmoffa * Cantera/python/Makefile.in: Added quotes around some variables. This is necessary if the variables have spaces in them in order for the values to be propagated correctly to the Makefile variables. 2006-04-19 22:44 hkmoffa * ext/f2c_libs/Makefile.in: Added a ldemulation arg to the strip command. This is necessary when compiling 32 bit on a 64 bit linux box. 2006-03-07 21:59 hkmoffa * Cantera/src/transport/: .cvsignore, MMCollisionInt.h, Makefile.in: Changed the name of some arguments that conflicted with names of member data. This created a warning message on Solaris. 2006-03-07 21:52 hkmoffa * Cantera/src/oneD/: .cvsignore, Domain1D.h, Inlet1D.h, Makefile.in, Resid1D.h, Sim1D.cpp, Sim1D.h, StFlow.h: Solaris sunpro compilers gave a warning about virtual functions in the same class which have the same name, but which have different arguments. Solaris complains when virtual functions are hidden, when they are overloaded. 2006-03-07 21:49 hkmoffa * Cantera/src/oneD/boundaries1D.cpp: const needed for proper virtual inheritance 2006-03-07 21:47 hkmoffa * Cantera/src/oneD/refine.cpp: Solaris warns about templated static functions. 2006-03-06 01:07 hkmoffa * test_problems/python/runtest: Quotation marks are needed on Solaris 2006-03-06 00:55 hkmoffa * Cantera/cxx/include/GRI30.h: Changed the defn of a function to agree with underlying virtual function. 2006-03-06 00:52 hkmoffa * test_problems/silane_equil/Makefile.in: Added deletion of sun cache directory 2006-03-04 00:21 hkmoffa * ext/tpx/: CarbonDioxide.cpp, CarbonDioxide.h, HFC134a.cpp, HFC134a.h, Heptane.cpp, Heptane.h, Hydrogen.cpp, Hydrogen.h, Methane.cpp, Methane.h, Nitrogen.cpp, Nitrogen.h, Oxygen.cpp, Oxygen.h, RedlichKwong.h, Sub.h, Water.cpp, Water.h, lk.cpp, lk.h: solaris warned about string literals being assigned to char *. So, I changed it so that the species name is storred within the object. 2006-03-03 23:44 hkmoffa * ext/: lapack/Makefile.in, recipes/Makefile.in: Took duplicate out of F77FLAGS statement. 2006-03-03 23:43 hkmoffa * ext/Makefile.in: Fixed f2c so that it's only compiled when the option is turned on. 2006-03-03 23:04 hkmoffa * Cantera/src/converters/.cvsignore: Added a file 2006-03-03 23:02 hkmoffa * Cantera/src/ReactionPath.h: An argument hid a member function name. I Changed the argument variable name. 2006-03-03 23:00 hkmoffa * Cantera/src/: zeroD/.cvsignore, zeroD/Makefile.in, thermo/.cvsignore, thermo/Makefile.in: Added SunWS_cache deletion 2006-03-03 22:57 hkmoffa * Cantera/src/ReactionPath.cpp: An argument conflicted with a member variable. I changed the name of the argument variable. 2006-03-03 22:11 hkmoffa * Cantera/src/: PureFluidPhase.cpp, PureFluidPhase.h: Changed the defn of two functions who were missing const declarations. These were const in Thermophase.h, and for proper inheritance, they need to be the same in derived classes. 2006-03-03 21:39 hkmoffa * ext/blas/Makefile.in: Took out duplicate flags 2006-03-03 21:31 hkmoffa * ext/math/: Makefile.in, dgbfa.f: Added the file dgbfa.f Took out duplicate FFLAGS statement. 2006-03-03 19:17 hkmoffa * tools/src/.cvsignore: Added the SunWS_cache directory. 2006-03-03 19:03 hkmoffa * config/: configure, configure.in: This is the start of trying to handle 32 bit vs. 64 bit compilation on select platforms. For example, on linux you can compile 32 bit and 64 bit if the os and hardware can handle 64 bits. In many cases you want to stick to 32 bit compilations. One reason is that python may only be set up for 32 bit add-on modules. e.g see the SIZEOF_VOID_P defn in pyconfig.h So, I added BITCOMPILE BITHARDWARE, and BITCHANGE variables I also added the variable ldemulationarg, because it's needed in one case for 32 bit compilations on 64 bit linux boxes. Later I will add the default compiler flags that make this 32 bit compilation work. Now they are brought in through a prep script. 2006-03-03 17:44 hkmoffa * ext/math/: Makefile.in, dgbefa.f, dgbfa.f: Replaced the file dgbefa.f with dgbfa.f. The later is used in other math routines. 2006-03-03 17:42 hkmoffa * config/configure.in: EXTRA_LINK can now come in with a default value. Am using this for the 32 bit compile on a 64 bit linux operating system. 2006-03-03 17:37 hkmoffa * test_problems/python/: .cvsignore, README, flame1_blessed.csv, flame1_blessed_linux.csv, frac.py, runtest: Rebaselined the problem. The number of points changed from 104 to 105 points. However, the solution stayed just about the same. 2006-03-03 16:33 hkmoffa * test_problems/ck2cti_test/: .cvsignore, runtest.in: Added files to the ignore list. 2006-03-03 16:29 hkmoffa * test_problems/diamondSurf/: Makefile.in, runDiamond.cpp: Fixed this test so that it can work in the srcdirtree environment. 2006-03-03 16:27 hkmoffa * test_problems/cxx_ex/: Makefile.in, gri30.xml, kin1_blessed.csv, silane.xml: Rebaselined the kin1 problem after taking a close look at the results. At one time plane, a couple of the radicals concentrations changed at the ~5.0E-3 level. This seems to be a nontrivial change, however, I this we should let it pass. I sense this problem could be made more stable if the nonlinear convergence requirements were made a lot stricter, while maintaining the same time step truncation error tolerances. 2006-03-03 16:21 hkmoffa * test_problems/silane_equil/: IdealGasMix.h, Makefile.in, output_blessed.txt, silane.xml, silane_equil.cpp: updated the test to ensure that it works from the srcdirtree. 2006-03-03 15:43 hkmoffa * test_problems/surfkin/: Interface.h, Makefile.in, surfdemo.cpp: Fixed the program so that it can be run from srcdirtree and install tree 2006-02-25 00:24 hkmoffa * Cantera/clib/src/ctonedim.cpp: Fixed a warning message about getting to the end of a int function without a return. 2006-02-25 00:22 hkmoffa * Cantera/clib/src/ct.cpp: Fixed a warning message about no return from a double function. 2005-12-19 07:10 dggoodwin * Cantera/python/ctml_writer.py: added size attribute to species class 2005-12-15 18:07 dggoodwin * Cantera/src/GasKinetics.cpp: added statements to getEquilibriumConstants to force a T update on the next call. Array m_rkcn was being left containing incorrect data. Problem is now fixed. 2005-12-09 18:49 dggoodwin * configure, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/python/Cantera/ThermoPhase.py, Cantera/python/Cantera/liquidvapor.py, Cantera/src/PureFluidPhase.cpp, Cantera/src/PureFluidPhase.h, Cantera/src/ThermoPhase.h, Cantera/src/phasereport.cpp, Cantera/src/converters/CKParser.cpp: removed critical and saturation properties from ThermoPhase 2005-12-07 04:34 dggoodwin * Cantera/python/examples/reactors/sensitivity1.py: initial import 2005-12-06 20:23 dggoodwin * config/: configure, configure.in: fixed sundials test 2005-12-05 19:36 dggoodwin * Cantera/: matlab/cantera/examples/catcomb.m, python/Cantera/OneD/onedim.py, src/oneD/Domain1D.h, src/oneD/MultiNewton.cpp: minor changes 2005-11-26 17:08 dggoodwin * configure, Cantera/clib/src/ctreactor.cpp, Cantera/python/Cantera/Reactor.py, Cantera/src/CVodesIntegrator.cpp, Cantera/src/zeroD/FlowReactor.h, Cantera/src/zeroD/ReactorBase.h, Cantera/src/zeroD/ReactorNet.cpp, Cantera/src/zeroD/ReactorNet.h, config/configure, config/configure.in, tools/templates/f77/demo.mak.in, tools/templates/f90/demo.mak.in: misc minor fixes 2005-11-23 02:19 dggoodwin * Cantera/python/Cantera/ThermoPhase.py: fixed error in restoreState 2005-11-22 18:59 dggoodwin * Cantera/cxx/demos/kinetics1.cpp, Cantera/src/FalloffFactory.cpp, Cantera/src/FalloffFactory.h, Cantera/src/GasKinetics.cpp, Cantera/src/Integrator.h, Cantera/src/KineticsFactory.cpp, Cantera/src/KineticsFactory.h, Cantera/src/SpeciesThermoFactory.cpp, Cantera/src/SpeciesThermoFactory.h, Cantera/src/SpeciesThermoMgr.h, Cantera/src/State.cpp, Cantera/src/StoichManager.h, Cantera/src/ThermoFactory.cpp, Cantera/src/ThermoFactory.h, Cantera/src/ThirdBodyMgr.h, Cantera/src/misc.cpp, Cantera/src/units.h, Cantera/src/utilities.h, Cantera/src/vec_functions.h, Cantera/src/transport/TransportFactory.cpp, Cantera/src/transport/TransportFactory.h, test_problems/silane_equil/Makefile.in, test_problems/surfkin/Makefile.in, tools/src/Makefile.in, tools/src/ctlibsample.mak.in, tools/src/sample.mak.in, tools/src/sample_f90.mak.in, tools/testtools/Makefile.in: changed some variable names to eliminate leading ddouble (and some single) underscores 2005-11-18 09:21 dggoodwin * ext/tpx/Sub.cpp: added check in set_xy for density == Undef but T != Undef. Failure to check for this condition had resulted in convergence to the wrong root for Hydrogen. 2005-11-14 19:49 hkmoffa * Cantera/src/thermo/: Makefile.in, MolalityVPSSTP.cpp, MolalityVPSSTP.h, StoichSubstanceSSTP.h, VPStandardStateTP.cpp, VPStandardStateTP.h: Added a few more files to handle liquid electrochemistry thermo. 2005-11-14 19:47 hkmoffa * Cantera/src/: ThermoPhase.h, ThermoPhase.cpp: Added two sets of functions One, InitThermoFromXML() and InitThermoFromFile() initializes ThermoPhase objects from XML data trees. The second set, which is incomplete, works to create a duplication capability for ThermoPhase objects, using the function, duplMyselfAsThermoPhase(). 2005-11-14 19:41 hkmoffa * Cantera/src/: Phase.cpp, Phase.h: Addec copy constructor and assignment operator. 2005-11-13 12:15 dggoodwin * Cantera/src/: CVodesIntegrator.cpp, InterfaceKinetics.cpp, misc.cpp: removed some diagnostic output 2005-11-10 16:06 dggoodwin * Cantera/src/: CVode.cpp, CVodesIntegrator.cpp, CVodesIntegrator.h, ChemEquil.cpp, EdgeKinetics.cpp, FalloffMgr.h, Func1.h, FuncEval.h, GRI_30_Kinetics.cpp, ImplicitChem.cpp, ImplicitChem.h, ImplicitSurfChem.cpp, ImplicitSurfChem.h, Integrator.h, Makefile.in, MultiPhase.cpp, NasaPoly1.h, NasaThermo.h, ODE_integrators.cpp, ReactionPath.cpp, ReactionPath.h, SpeciesThermoFactory.cpp, ThermoPhase.cpp, ctvector.h, misc.cpp, transport/SolidTransport.cpp, transport/TransportBase.h: support for sensitivity analysis 2005-11-10 16:02 dggoodwin * Cantera/src/zeroD/: FlowReactor.h, FlowReactor.cpp: initial import 2005-10-31 17:29 dggoodwin * Cantera/src/SimpleThermo.h: corrected bug that caused problems if this SpeciesThermo manager was used in conjunction with another one (e.g. NASA). 2005-10-31 17:06 hkmoffa * Cantera/src/ChemEquil.cpp: Eliminated 2 unused variables. 2005-10-29 06:22 dggoodwin * Cantera/matlab/cantera/gaussian.m: initial import 2005-10-29 01:16 hkmoffa * Cantera/src/: GeneralSpeciesThermo.cpp, SpeciesThermoInterpType.h, thermo/SingleSpeciesTP.cpp: Added a virtual destructor for SpeciesThermoInterpType.h. Without it, there is a memory leak. 2005-10-25 00:13 hkmoffa * Cantera/src/thermo/SingleSpeciesTP.cpp: Forgot the member function getCp_R_ref() in the previous commit. This commit adds that function. 2005-10-24 23:57 hkmoffa * Cantera/cxx/include/thermo.h: Added the new file. 2005-10-24 23:52 hkmoffa * Cantera/src/thermo/: Makefile.in, SingleSpeciesTP.cpp, SingleSpeciesTP.h, StoichSubstanceSSTP.cpp, StoichSubstanceSSTP.h: Added an example of SingleSpeciesTP, called StoichSubstanceSSTP, which does the same thing as the StoichSubstance in the previous directory. Put more functionality in the SingleSpeciesTP level; it now evaluates the reference polynomials. 2005-10-24 23:38 hkmoffa * Cantera/src/ThermoPhase.h: Moved the getStandardChemPotentials() routine to the standard state functions member group. 2005-10-24 20:03 hkmoffa * Cantera/cxx/include/thermo.h: Added a thermo.h file to the cxx directory. This file is analogous to the transport.h file. 2005-10-24 19:03 hkmoffa * Cantera/src/ThermoPhase.h: Moved the getActivities and getActivityCoefficients() functions to the activities member group. 2005-10-24 18:41 dggoodwin * Cantera/src/: ODE_integrators.cpp, CVodesIntegrator.h, CVodesIntegrator.cpp: initial import 2005-10-24 17:39 hkmoffa * Cantera/src/: State.h, State.cpp: Added the copy constructor and assignment operator. 2005-10-22 02:53 hkmoffa * Cantera/src/importCTML.cpp: Generalization of the getStick() routine, to include the case where you have bulk reactants as well as surface reactants and a single gas phase reactant. 2005-10-22 02:35 hkmoffa * Cantera/src/MultiPhase.h: Added cvs information to the file. 2005-10-22 02:29 hkmoffa * Cantera/src/Makefile.in: Missed a .h file in the last commit. 2005-10-22 02:18 hkmoffa * Cantera/src/: ConstCpPoly.cpp, ConstCpPoly.h, GeneralSpeciesThermo.cpp, GeneralSpeciesThermo.h, Makefile.in, Mu0Poly.cpp, Mu0Poly.h, NasaPoly1.h, NasaPoly2.h, NasaThermo.h, ShomatePoly.h, ShomateThermo.h, SimpleThermo.h, SpeciesThermo.h, SpeciesThermoFactory.cpp, SpeciesThermoInterpType.h, SpeciesThermoMgr.h, speciesThermoTypes.h: General commit for a reworking of the Species reference state thermo calculation. This is a reclarification of the reference state thermo calculations for individual species, and an expansion to handle liquid phase thermo needs. There is now a virtual base class for the calculation of reference state thermo functions for individual species. It is called SpeciesThermoInterpType. There is also a class which allows for a complete general calculation of the reference state species thermo for a phase, GeneralSpeciesThermo. Some of this new functionality may be relegated to ifdef blocks in the future to limit the amount of code for users who don't need the new functionality. 2005-10-22 00:44 hkmoffa * Cantera/src/reaction_defs.h: Added cvs info for this file. 2005-10-22 00:41 hkmoffa * Cantera/src/IdealGasPhase.h: Fixed an error in the doxygen comments that caused my version of doxygen to segfault. This was caused by member groups not having a closing bracket. 2005-10-22 00:25 hkmoffa * Cantera/src/: IdealGasPhase.cpp, IdealGasPhase.h: Filled out 2 missing functions to this ThermoPhase object: getIntEnergy_RT() and getIntEnergy_RT_ref(). 2005-10-22 00:16 hkmoffa * Cantera/src/ThermoPhase.h: Added a detailed doxygen member function description. 2005-10-22 00:15 hkmoffa * Cantera/src/StoichSubstance.h: Added more documentation to doxygen. 2005-10-21 23:57 hkmoffa * Cantera/src/StoichSubstance.h: Added 3 missing member functions. Note, this class is still not complete; it's missing the ref functions. 2005-10-21 23:42 hkmoffa * Cantera/src/Kinetics.h: Changed some comments so that they reflect the correct units. 2005-10-21 23:39 hkmoffa * Cantera/src/misc.cpp: Added entries to the errorhandling group in the doxygen documentation. 2005-10-21 23:38 hkmoffa * Cantera/src/Constituents.h: Eliminated a doxygen warning message. Also, took out the log file entry. 2005-10-21 23:35 hkmoffa * Cantera/src/ctexceptions.h: Just changed the comments. Added an errorhandling group to group together functions and classes dealing with error handling in the doxygen output. 2005-10-21 23:28 hkmoffa * Cantera/src/units.h: Added the unit 'gmol' to the list of recognized units. Added more accuracy to the eV unit. 2005-10-21 20:23 hkmoffa * Cantera/src/: Constituents.cpp, Constituents.h: Added a copy constructor and an assignment operator. 2005-10-21 18:18 hkmoffa * Cantera/src/: ThermoPhase.cpp, ThermoPhase.h: Added a routine to the ThermoPhase specification: activityConvention(). This has a default value of molar-based. The other option is molality based. 2005-10-21 17:51 hkmoffa * .cvsignore: Added the file config.h to this list. It's a generated file. 2005-10-21 02:57 dggoodwin * Cantera/python/examples/gasdynamics/soundSpeeds.py: initial import 2005-10-21 01:33 hkmoffa * config.h.in: Added a compilation define when electrolytes are included. 2005-10-21 01:31 hkmoffa * config/configure.in: Added support for compiling the src/thermo directory. 2005-10-21 01:30 hkmoffa * configure: Added the WITH_ELECTROLYTE keyword into the script. However, I have made the default so that the thermo directory is not compiled. 2005-10-21 01:29 hkmoffa * Cantera/src/Makefile.in: Added logic for including the thermo directory into the main compilation step. 2005-10-21 01:27 hkmoffa * Cantera/src/thermo/: .cvsignore, Makefile.in, SingleSpeciesTP.cpp, SingleSpeciesTP.h: Added the SingleSpeciesTP file as a trial commit. Want to get the bugs out of adding these files to the main distribution first. 2005-10-04 18:53 hkmoffa * Cantera/src/xml.cpp: Commented the _require() routine. 2005-09-29 23:05 hkmoffa * ext/tpx/: CarbonDioxide.cpp, Heptane.cpp: Fixed a compilation error on Linux. 2005-09-27 14:12 dggoodwin * Cantera/src/Constituents.cpp, Cantera/src/ThermoFactory.cpp, Cantera/src/ct_defs.h, Cantera/src/ctvector.cpp, Cantera/src/recipes.h, configure, Cantera/clib/src/ctonedim.cpp: minor cleanup 2005-09-27 14:08 dggoodwin * Cantera/src/Makefile.in: removed reference to recipes.h 2005-09-27 14:08 dggoodwin * Cantera/src/stringUtils.cpp: changed stripws to allow spaces in the middle of strings 2005-09-22 05:45 dggoodwin * Cantera/python/examples/equilibrium/adiabatic.py: added phi title to output csv file 2005-09-16 06:57 dggoodwin * Cantera/python/Cantera/liquidvapor.py, Cantera/python/examples/liquid_vapor/critProperties.py, Cantera/src/BandMatrix.cpp, data/inputs/liquidvapor.cti, tools/src/fixtext.cpp: changes to support the classes for CO2 and heptane in tpx 2005-09-16 06:55 dggoodwin * ext/tpx/: CarbonDioxide.cpp, CarbonDioxide.h, Heptane.cpp, Heptane.h, Makefile.in, subs.h, utils.cpp: added files for CO2 and heptane contributed by R. Hunt, Stanford 2005-09-15 05:50 dggoodwin * Cantera/src/oneD/: Domain1D.cpp, MultiNewton.cpp, StFlow.cpp, StFlow.h, boundaries1D.cpp, oneD_files.cpp: changes to make solution of user-defined BVPs simpler. 2005-09-15 05:47 dggoodwin * Cantera/src/oneD/Inlet1D.h: overloaded setupGrid in boundary1D to do nothing. Without this, Domain1D::setupGrid would be called for connector domains. 2005-09-15 05:43 dggoodwin * Cantera/python/examples/equilibrium/multiphase_plasma.py: added comment 2005-09-15 05:40 dggoodwin * Cantera/python/examples/flames/adiabatic_flame.py: changed error tolerance for time integration. The previous large value of atol was causing problems. 2005-09-13 19:10 dggoodwin * Cantera/src/oneD/: Domain1D.cpp, Domain1D.h, Inlet1D.h, Sim1D.cpp, oneD_files.cpp: modifications to simplify solving boundary value problems 2005-09-02 05:41 dggoodwin * test_problems/ck2cti_test/: runtest.in, soot.inp, soot_blessed.cti, therm_soot.dat: added test of extensions for large molecules as implemented in the MIT soot mechanism. 2005-08-30 22:28 dggoodwin * test_problems/Makefile.in: removed silane_eqil 2005-08-30 22:28 dggoodwin * test_problems/python/: frac.cti, frac.py, frac_blessed.out, runtest: modified the frac test 2005-08-26 18:28 hkmoffa * configure: Changed the default back to the case where Cantera will make its own lapack and blas libraries. 2005-08-26 16:59 hkmoffa * config/configure.in: Added an ending 'fi' 2005-08-19 05:17 dggoodwin * winconfig.h, Cantera/matlab/cantera/buildwin.m, Cantera/matlab/cantera/private/ctmethods.cpp, Cantera/matlab/cantera/private/mllogger.h, Cantera/matlab/cantera/private/write.cpp, Cantera/python/src/pycantera.cpp, Cantera/src/logger.h, Cantera/src/misc.cpp, Cantera/src/oneD/MultiJac.cpp, config/configure.in: corrected minor bugs in windows versions of files 2005-08-18 20:16 dggoodwin * configure, Cantera/src/State.cpp, config/configure, config/configure.in, ext/f2c_libs/arith.h: minor cleanup 2005-07-30 23:49 hkmoffa * Cantera/src/ctml.cpp: Fixed an error where Cantera would seg fault if errors in the XML file occurred. 2005-07-29 01:02 hkmoffa * Cantera/src/converters/CKParser.cpp: Got rid of one warning message. 2005-07-29 01:01 hkmoffa * Cantera/src/converters/ck2ct.cpp: Changed the format type of an fprintf statement. 2005-07-28 23:53 hkmoffa * Cantera/src/: ctml.cpp, ctml.h: Added the getMatrixValues routine. This routine fills in a matrix of doubles, keyed by a lookup name that determines the two indecises, e.g.: H+:Cl-:3.0E5 This introduces a triplet notation into the Cantera API. Added a parameter to the getFloatArray() routine, that has a default value -> so it shouldn't cause any changes to the API. 2005-07-28 23:40 hkmoffa * Cantera/src/: stringUtils.cpp, stringUtils.h: Added the atofCheck() routine. 2005-07-26 05:56 dggoodwin * winconfig.h, Cantera/src/EdgeKinetics.h, Cantera/src/InterfaceKinetics.cpp, Cantera/src/InterfaceKinetics.h, Cantera/src/Kinetics.h, Cantera/src/ReactionStoichMgr.cpp, Cantera/src/ReactionStoichMgr.h, Cantera/src/StoichManager.h, Cantera/src/converters/CKParser.cpp, Cantera/src/converters/Reaction.h, Cantera/src/converters/ck2ct.cpp: cleanup 2005-07-25 05:54 dggoodwin * Cantera/src/ReactionStoichMgr.cpp: changed how global reactions are handled 2005-07-25 05:53 dggoodwin * Cantera/src/converters/: CKReader.cpp, CKReader.h, ck2ct.cpp: support for fractional stoich coefficients 2005-07-25 05:52 dggoodwin * Cantera/src/converters/: Reaction.cpp, Reaction.h: added fwdOrder 2005-07-25 05:51 dggoodwin * Cantera/src/converters/CKParser.cpp: now recognizes the FORD keyword 2005-07-23 16:12 dggoodwin * test_problems/silane_equil/output_blessed.txt: SI chem potential changed in last digit 2005-07-22 15:33 dggoodwin * Cantera/src/ChemEquil.cpp, Cantera/src/GasKinetics.cpp, Cantera/src/GasKinetics.h, configure, ext/f2c_libs/arith.h: cleanup 2005-07-22 14:50 dggoodwin * examples/cxx/: Makefile.in, equil_example1.cpp, example_utils.h, examples.cpp, kinetics_example1.cpp, kinetics_example2.cpp, rxnpath_example1.cpp, transport_example1.cpp, transport_example2.cpp: updated 2005-07-22 14:50 dggoodwin * Cantera/src/equilibrate.cpp: minor cleanup 2005-07-22 14:36 dggoodwin * Cantera/python/setup.py.in: replaced g2c with ctf2c 2005-07-22 06:36 dggoodwin * Cantera/src/equil.h: changed default loglevel to 0. 2005-07-22 05:27 dggoodwin * Cantera/src/: ChemEquil.cpp, ChemEquil.h, equil.h, equilibrate.cpp, MultiPhase.cpp, MultiPhase.h, MultiPhaseEquil.cpp, MultiPhaseEquil.h: enhanced and cleaned up equilibrium code 2005-07-21 17:00 dggoodwin * test_problems/python/.cvsignore: fixed .cvsignore so that frac_blessed.out is not included 2005-07-16 14:19 dggoodwin * test_problems/python/frac_blessed.out: removed diagnostic messages 2005-07-14 20:44 dggoodwin * Cantera/src/: MultiPhase.cpp, MultiPhase.h, ChemEquil.h: improvements to equilibrate 2005-07-14 20:40 dggoodwin * Cantera/src/: importCTML.cpp, importCTML.h: allow tolerance on reaction element balances, rather than requiring precise balance 2005-07-02 20:46 hkmoffa * config/configure.in: Fixed an error in the configure.in file, where the F90 interface was requested to be not built, but an attempt to build it is made anyway -> windows cygwin interface. 2005-07-02 20:30 hkmoffa * configure: Took out an extraneous line that might be confusing. 2005-06-28 18:00 hkmoffa * Cantera/src/MultiPhase.cpp: Fixed a compilation error condition. Commented out the call to init() within updatePhases(). 2005-06-27 16:51 dggoodwin * Cantera/src/: MultiPhaseEquil.cpp, MultiPhaseEquil.h, MultiPhase.h, MultiPhase.cpp: cleanup 2005-06-25 17:57 dggoodwin * Makefile.in, Cantera/clib/src/ctmultiphase.cpp, Cantera/python/examples/.cvsignore, Cantera/python/examples/run_examples.py, Cantera/src/MultiPhase.cpp, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/MultiPhaseEquil.h: cleanup 2005-06-25 15:16 dggoodwin * Cantera/python/examples/: catcomb.py, critProperties.py, diamond.py, dustygas.py, flame1.py, flame2.py, function1.py, isentropic.py, mix1.py, mix2.py, npflame1.py, rankine.py, reactor1.py, reactor2.py, rxnpath1.py, rxnpath2.py, stflame1.py, flames/npflame1.py, flames/ohn.cti, gasdynamics/isentropic.py, liquid_vapor/critProperties.py, liquid_vapor/rankine.py, misc/rxnpath1.py, reactors/function1.py, reactors/mix1.py, reactors/mix2.py, reactors/reactor1.py, reactors/reactor2.py, surface_chemistry/catcomb.py, surface_chemistry/diamond.py, transport/dustygas.py: reorganized 2005-06-25 07:27 dggoodwin * Cantera/clib/src/ctmultiphase.cpp, Cantera/python/Cantera/OneD/__init__.py, Cantera/python/examples/catcomb.py, Cantera/python/examples/flames/ohn.cti, Cantera/src/MultiPhase.cpp, Cantera/src/MultiPhase.h, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/MultiPhaseEquil.h, Cantera/src/StoichManager.h, Cantera/src/ThermoPhase.h, Cantera/src/oneD/Domain1D.h, Cantera/src/oneD/OneDim.cpp, Cantera/src/oneD/StFlow.cpp, tools/src/package4mac.in, tools/templates/f77/demo.mak.in, tools/templates/f90/demo.mak.in: cleanup 2005-06-24 19:43 dggoodwin * apps/MixMaster/KineticsFrame.py: changed default to non-browser 2005-06-24 19:04 dggoodwin * README.txt: updated 2005-06-23 17:14 hkmoffa * config/: configure, configure.in: Took out the version number from the path directories. Simplified the installation variability in the process by taking out the choice for a distributed installation. Now, everything looks the same under the "Cantera Installation Directory Tree" hood, no matter what version is used. This should reduce the number of installation problems encountered. 2005-06-23 17:10 hkmoffa * Makefile.in: Changed the rm commands to use a common rule. On occasion make was failing because rm didn't have the -r option when it encountered directories. 2005-06-18 20:03 dggoodwin * Makefile.in: copy cti files to Python flame demo directory 2005-06-18 20:02 dggoodwin * Cantera/python/examples/flames/: free_h2_air.py, ohn.cti: add free H2/air flame example 2005-06-18 19:01 dggoodwin * tools/templates/cxx/demo.mak.in: Prerelease_1_6_0_branch merged into trunk 2005-06-18 18:58 dggoodwin * .cvsignore, ChangeLog, INSTALLING, Makefile.in, README, config.h.in, configure, winconfig.h, Cantera/Makefile.in, Cantera/clib/src/Cabinet.h, Cantera/clib/src/Makefile.in, Cantera/clib/src/Storage.cpp, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/clib/src/ctfunc.cpp, Cantera/clib/src/ctmultiphase.cpp, Cantera/clib/src/ctmultiphase.h, Cantera/clib/src/ctonedim.cpp, Cantera/clib/src/ctonedim.h, Cantera/clib/src/ctreactor.cpp, Cantera/clib/src/ctrpath.cpp, Cantera/clib/src/ctxml.cpp, Cantera/cxx/Makefile.in, Cantera/cxx/demos/Makefile.in, Cantera/cxx/demos/flamespeed.cpp, Cantera/cxx/demos/kinetics1.cpp, Cantera/cxx/demos/rankine.cpp, Cantera/cxx/include/Cantera.h, Cantera/cxx/include/equilibrium.h, Cantera/cxx/include/importPhase.h, Cantera/cxx/include/integrators.h, Cantera/cxx/include/onedim.h, Cantera/cxx/include/transport.h, Cantera/cxx/include/zerodim.h, Cantera/cxx/src/cxxutils.cpp, Cantera/fortran/src/cantera_kinetics.f90, Cantera/fortran/src/cantera_thermo.f90, Cantera/matlab/Makefile.in, Cantera/matlab/setup_matlab.py.in, Cantera/matlab/cantera/buildwin.m, Cantera/matlab/cantera/ck2cti.m, Cantera/matlab/cantera/1D/@Domain1D/Domain1D.m, Cantera/matlab/cantera/1D/@Domain1D/private/domain_methods.m, Cantera/matlab/cantera/@Mixture/Mixture.m, Cantera/matlab/cantera/@Mixture/addPhase.m, Cantera/matlab/cantera/@Mixture/chemPotentials.m, Cantera/matlab/cantera/@Mixture/display.m, Cantera/matlab/cantera/@Mixture/elementIndex.m, Cantera/matlab/cantera/@Mixture/equilibrate.m, Cantera/matlab/cantera/@Mixture/mix_hndl.m, Cantera/matlab/cantera/@Mixture/nElements.m, Cantera/matlab/cantera/@Mixture/nPhases.m, Cantera/matlab/cantera/@Mixture/nSpecies.m, Cantera/matlab/cantera/@Mixture/phaseMoles.m, Cantera/matlab/cantera/@Mixture/pressure.m, Cantera/matlab/cantera/@Mixture/setPhaseMoles.m, Cantera/matlab/cantera/@Mixture/setPressure.m, Cantera/matlab/cantera/@Mixture/setSpeciesMoles.m, Cantera/matlab/cantera/@Mixture/setTemperature.m, Cantera/matlab/cantera/@Mixture/speciesIndex.m, Cantera/matlab/cantera/@Mixture/temperature.m, Cantera/matlab/cantera/@Mixture/private/mixturemethods.m, Cantera/matlab/cantera/@Reactor/mass.m, Cantera/matlab/cantera/@Reactor/setEnergy.m, Cantera/matlab/cantera/@Solution/display.m, Cantera/matlab/cantera/@ThermoPhase/display.m, Cantera/matlab/cantera/@ThermoPhase/equilibrate.m, Cantera/matlab/cantera/@ThermoPhase/name.m, Cantera/matlab/cantera/@ThermoPhase/setName.m, Cantera/matlab/cantera/@ThermoPhase/private/thermo_set.m, Cantera/matlab/cantera/examples/catcomb.m, Cantera/matlab/cantera/examples/flame1.m, Cantera/matlab/cantera/examples/ignite.m, Cantera/matlab/cantera/examples/ignite2.m, Cantera/matlab/cantera/examples/ignite3.m, Cantera/matlab/cantera/examples/ignite_hp.m, Cantera/matlab/cantera/examples/ignite_uv.m, Cantera/matlab/cantera/examples/test_examples.m, Cantera/matlab/cantera/private/ctfunctions.cpp, Cantera/matlab/cantera/private/ctmatutils.h, Cantera/matlab/cantera/private/ctmethods.cpp, Cantera/matlab/cantera/private/mixturemethods.cpp, Cantera/matlab/cantera/private/onedimmethods.cpp, Cantera/matlab/cantera/private/phasemethods.cpp, Cantera/matlab/cantera/private/thermomethods.cpp, Cantera/matlab/cantera/private/write.cpp, Cantera/matlab/cantera/tutorial/tut1.m, Cantera/matlab/cantera/tutorial/tut4.m, Cantera/python/Makefile.in, Cantera/python/ctml_writer.py, Cantera/python/setup.py.in, Cantera/python/winsetup.py, Cantera/python/Cantera/Kinetics.py, Cantera/python/Cantera/Phase.py, Cantera/python/Cantera/ThermoPhase.py, Cantera/python/Cantera/__init__.py, Cantera/python/Cantera/ck2cti.py, Cantera/python/Cantera/constants.py, Cantera/python/Cantera/mixture.py, Cantera/python/Cantera/num.py, Cantera/python/Cantera/OneD/BurnerFlame.py, Cantera/python/Cantera/OneD/FreeFlame.py, Cantera/python/Cantera/OneD/onedim.py, Cantera/python/examples/flame1.py, Cantera/python/examples/equilibrium/KOH.cti, Cantera/python/examples/equilibrium/adiabatic.py, Cantera/python/examples/equilibrium/multiphase_plasma.py, Cantera/python/examples/equilibrium/plotting.py, Cantera/python/examples/equilibrium/simple.py, Cantera/python/examples/equilibrium/stoich.py, Cantera/python/examples/flames/adiabatic_flame.py, Cantera/python/examples/flames/flame1.py, Cantera/python/examples/flames/flame2.py, Cantera/python/examples/flames/stflame1.py, Cantera/python/examples/kinetics/ratecoeffs.py, Cantera/python/src/cantera.def, Cantera/python/src/ct.def, Cantera/python/src/ctflow.def, Cantera/python/src/ctfuncs.cpp, Cantera/python/src/ctkinetics.def, Cantera/python/src/ctmultiphase_methods.cpp, Cantera/python/src/ctnumerics.def, Cantera/python/src/ctonedim_methods.cpp, Cantera/python/src/ctphase.def, Cantera/python/src/ctphase_methods.cpp, Cantera/python/src/ctsurf.def, Cantera/python/src/ctthermo.def, Cantera/python/src/ctthermo_methods.cpp, Cantera/python/src/cttransport.def, Cantera/python/src/methods.h, Cantera/python/src/pycantera.cpp, Cantera/python/src/pylogger.h, Cantera/python/src/pyutils.h, Cantera/src/.cvsignore, Cantera/src/Array.h, Cantera/src/ArrayViewer.h, Cantera/src/BandMatrix.h, Cantera/src/ChemEquil.cpp, Cantera/src/ChemEquil.h, Cantera/src/ConstDensityThermo.cpp, Cantera/src/ConstDensityThermo.h, Cantera/src/Constituents.cpp, Cantera/src/Constituents.h, Cantera/src/Elements.cpp, Cantera/src/Elements.h, Cantera/src/GRI_30_Kinetics.cpp, Cantera/src/GasKinetics.cpp, Cantera/src/GasKinetics.h, Cantera/src/IdealGasPhase.cpp, Cantera/src/IdealGasPhase.h, Cantera/src/ImplicitSurfChem.cpp, Cantera/src/InterfaceKinetics.cpp, Cantera/src/InterfaceKinetics.h, Cantera/src/Kinetics.cpp, Cantera/src/Kinetics.h, Cantera/src/KineticsFactory.cpp, Cantera/src/LatticeSolidPhase.cpp, Cantera/src/LatticeSolidPhase.h, Cantera/src/Makefile.in, Cantera/src/MetalPhase.h, Cantera/src/MultiPhase.cpp, Cantera/src/MultiPhase.h, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/MultiPhaseEquil.h, Cantera/src/Phase.cpp, Cantera/src/Phase.h, Cantera/src/RateCoeffMgr.h, Cantera/src/ReactionData.h, Cantera/src/ReactionStoichMgr.cpp, Cantera/src/ReactionStoichMgr.h, Cantera/src/RxnRates.h, Cantera/src/SpeciesThermoFactory.cpp, Cantera/src/State.h, Cantera/src/StoichManager.h, Cantera/src/StoichSubstance.cpp, Cantera/src/StoichSubstance.h, Cantera/src/SurfPhase.h, Cantera/src/ThermoFactory.cpp, Cantera/src/ThermoPhase.cpp, Cantera/src/ThermoPhase.h, Cantera/src/config.h, Cantera/src/ct2ctml.cpp, Cantera/src/ct_defs.h, Cantera/src/ctexceptions.h, Cantera/src/ctml.cpp, Cantera/src/ctvector.cpp, Cantera/src/global.h, Cantera/src/importCTML.cpp, Cantera/src/logger.h, Cantera/src/misc.cpp, Cantera/src/mix_defs.h, Cantera/src/phasereport.cpp, Cantera/src/reaction_defs.h, Cantera/src/units.h, Cantera/src/utilities.h, Cantera/src/converters/Makefile.in, Cantera/src/converters/ck2ct.cpp, Cantera/src/converters/ck2ct.h, Cantera/src/oneD/Domain1D.h, Cantera/src/oneD/Inlet1D.h, Cantera/src/oneD/Makefile.in, Cantera/src/oneD/OneDim.cpp, Cantera/src/oneD/StFlow.cpp, Cantera/src/oneD/StFlow.h, Cantera/src/oneD/boundaries1D.cpp, Cantera/src/transport/Makefile.in, Cantera/src/transport/MultiTransport.cpp, Cantera/src/transport/SolidTransport.cpp, Cantera/src/transport/TransportFactory.cpp, Cantera/src/zeroD/FlowDevice.cpp, Cantera/src/zeroD/FlowDevice.h, Cantera/src/zeroD/Makefile.in, Cantera/src/zeroD/PID_Controller.h, Cantera/src/zeroD/Reactor.cpp, Cantera/src/zeroD/Reactor.h, Cantera/src/zeroD/ReactorBase.cpp, Cantera/src/zeroD/ReactorBase.h, Cantera/src/zeroD/ReactorNet.cpp, Cantera/src/zeroD/ReactorNet.h, Cantera/src/zeroD/Reservoir.h, Cantera/src/zeroD/Wall.cpp, Cantera/src/zeroD/Wall.h, Cantera/src/zeroD/flowControllers.h, apps/MixMaster/KineticsFrame.py, apps/MixMaster/Mix.py, apps/MixMaster/ThermoFrame.py, apps/MixMaster/ThermoProp.py, config/configure, config/configure.in, data/inputs/elements.xml, data/inputs/nasa.cti, data/inputs/nasa_condensed.cti, data/inputs/nasa_gas.cti, examples/cxx/Makefile.in, examples/cxx/equil_example1.cpp, examples/cxx/examples.cpp, examples/cxx/kinetics_example1.cpp, ext/Makefile.in, ext/blas/Makefile.in, ext/cvode/Makefile.in, ext/f2c_blas/Makefile.in, ext/f2c_lapack/Makefile.in, ext/f2c_libs/Makefile.in, ext/f2c_libs/arith.h, ext/f2c_math/.cvsignore, ext/f2c_math/Makefile.in, ext/f2c_math/fdump.c, ext/f2c_recipes/Makefile.in, ext/lapack/Makefile.in, ext/math/Makefile.in, ext/recipes/Makefile.in, ext/tpx/.depends, ext/tpx/Makefile.in, test_problems/ck2cti_test/gri30a_blessed.cti, test_problems/ck2cti_test/runtest.in, test_problems/diamondSurf/Makefile.in, test_problems/diamondSurf/diamond_blessed.xml, test_problems/diamondSurf/runDiamond.cpp, test_problems/python/flame1_blessed.csv, test_problems/python/flame1_blessed_linux.csv, test_problems/python/frac.cti, test_problems/python/frac.py, test_problems/python/frac_blessed.out, test_problems/python/runtest, test_problems/silane_equil/Makefile.in, test_problems/silane_equil/output_blessed.txt, test_problems/silane_equil/silane_equil.cpp, test_problems/surfkin/Makefile.in, tools/doc/Cantera.cfg, tools/doc/footer.html, tools/doc/header.html, tools/doc/doxyinput/Cantera.txt, tools/doc/doxyinput/build.txt, tools/doc/doxyinput/ctnew.txt, tools/doc/doxyinput/cxx-headers.txt, tools/doc/doxyinput/demo.cpp, tools/doc/doxyinput/demo1.cpp, tools/doc/doxyinput/demo1a.cpp, tools/doc/doxyinput/demoequil.cpp, tools/doc/doxyinput/equildemo.txt, tools/doc/doxyinput/ex1.cpp, tools/doc/doxyinput/except.cpp, tools/doc/doxyinput/exceptions.txt, tools/doc/doxyinput/introcxx.txt, tools/doc/doxyinput/languages.txt, tools/doc/doxyinput/thermo.txt, tools/doc/doxyinput/thermodemo.cpp, tools/doc/doxyinput/thermodemo.txt, tools/src/Makefile.in, tools/src/ck2cti.cpp, tools/src/findtag.py, tools/src/finish_install.py.in, tools/src/fixtext.cpp, tools/src/package4mac.in: Prerelease_1_6_0_branch merged into trunk 2005-06-18 05:18 dggoodwin * Cantera/python/Cantera/OneD/FreeFlame.py: initial import 2005-06-17 07:49 dggoodwin * Cantera/matlab/cantera/@Mixture/: Mixture.m, chemPotentials.m, display.m, elementIndex.m, equilibrate.m, mix_hndl.m, nElements.m, nSpecies.m, phaseMoles.m, pressure.m, setPhaseMoles.m, setPressure.m, setSpeciesMoles.m, setTemperature.m, speciesIndex.m, temperature.m: initial import 2005-06-17 07:46 dggoodwin * Cantera/python/examples/flames/adiabatic_flame.py: initial import 2005-06-17 00:59 dggoodwin * Cantera/matlab/cantera/@Solution/display.m: use display method inherited from ThermoPhase 2005-06-16 05:08 dggoodwin * Makefile.in, Cantera/matlab/cantera/examples/prandtl1.m, Cantera/python/setup.py.in, Cantera/src/ChemEquil.cpp, Cantera/src/MultiPhaseEquil.cpp: changes to make ChemEquil more stable 2005-06-10 00:27 dggoodwin * configure, Cantera/cxx/demos/Makefile.in, examples/cxx/Makefile.in, examples/cxx/equil_example1.cpp, test_problems/silane_equil/Makefile.in, test_problems/surfkin/Makefile.in: minor cleanup 2005-06-09 00:36 dggoodwin * configure, Cantera/matlab/setup_matlab.py.in, Cantera/python/setup.py.in, Cantera/src/oneD/StFlow.cpp, Cantera/src/oneD/StFlow.h, Cantera/src/oneD/boundaries1D.cpp, config/configure, config/configure.in, tools/templates/cxx/demo.mak.in: support for the Accelerate framework on the Mac 2005-06-08 07:29 dggoodwin * Cantera/python/examples/equilibrium/: KOH.cti, adiabatic.py, multiphase_plasma.py, simple.py, stoich.py: initial import 2005-06-08 05:54 dggoodwin * test_problems/python/flame1_blessed_linux.csv: updated blessed file 2005-06-08 04:43 dggoodwin * Cantera/matlab/cantera/private/mixturemethods.cpp: support for multiphase mixtures 2005-06-06 16:28 hkmoffa * Cantera/src/transport/TransportFactory.cpp: Added comments. 2005-05-22 23:07 dggoodwin * test_problems/python/: frac.cti, frac.py, frac_blessed.out, runtest: fractional stoichiometric coefficient test 2005-05-22 22:38 dggoodwin * Cantera/src/GasKinetics.cpp, Cantera/src/GasKinetics.h, Cantera/src/ReactionStoichMgr.cpp, Cantera/src/SpeciesThermoFactory.cpp, Cantera/src/StoichManager.h, Cantera/src/ct2ctml.cpp, Cantera/src/mix_defs.h, configure, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/clib/src/ctmultiphase.cpp, Cantera/clib/src/ctmultiphase.h, Cantera/fortran/src/cantera_kinetics.f90, Cantera/fortran/src/cantera_thermo.f90, Cantera/matlab/Makefile.in, Cantera/matlab/setup_matlab.py.in, Cantera/matlab/cantera/@ThermoPhase/name.m, Cantera/matlab/cantera/private/ctmethods.cpp, Cantera/matlab/cantera/private/phasemethods.cpp, Cantera/matlab/cantera/private/thermomethods.cpp, Cantera/matlab/cantera/private/write.cpp, Cantera/python/Cantera/Kinetics.py, Cantera/python/Cantera/Mixture.py, Cantera/python/Cantera/ThermoPhase.py, Cantera/python/Cantera/mixture.py, Cantera/python/src/ctthermo_methods.cpp, tools/doc/doxyinput/Cantera.txt, tools/doc/doxyinput/ctnew.txt, tools/doc/doxyinput/demo1a.cpp, tools/doc/doxyinput/introcxx.txt: support for fractional stoichiometric coefficients 2005-05-20 00:15 hkmoffa * Cantera/src/units.h: Added in more units: nm nanometers Angstrom Angstroms Activation Energy Units: Kelvin (GasConstant) Dimensionless (273.15 * GasConstant) -> specification of dimensionless gibbs free energies is common in electrochemistry. However, you have to multiply by the current temperature to convert correctly here. 2005-05-01 15:58 dggoodwin * Cantera/src/: Array.h, ArrayViewer.h, BandMatrix.h, ChemEquil.h, Kinetics.h, MultiPhase.cpp, MultiPhase.h, MultiPhaseEquil.cpp, MultiPhaseEquil.h, ReactionData.h, ReactionStoichMgr.cpp, ReactionStoichMgr.h, StoichManager.h, ct_defs.h, ctml.cpp, global.h, importCTML.cpp, phasereport.cpp: added support for non-integral product stoichiometric coefficients 2005-04-23 19:14 dggoodwin * Cantera/matlab/cantera/@Mixture/: Mixture.m, addPhase.m, mix_hndl.m, nPhases.m, private/mixturemethods.m: initial import 2005-04-23 19:12 dggoodwin * Cantera/matlab/cantera/@ThermoPhase/: equilibrate.m, name.m, setName.m, private/thermo_set.m: added name and setName methods 2005-04-23 04:42 dggoodwin * Cantera/matlab/cantera/examples/: ignite.m, ignite2.m, ignite3.m, ignite_hp.m, ignite_uv.m: corrected plot labels to be mass, rather than mole, fractions 2005-04-17 17:48 hkmoffa * Cantera/src/global.h: Added cvs id information. 2005-04-15 21:47 hkmoffa * ext/Makefile.in: Changed the Makefile to always make f2c_libs. Applications may have use of this even if Cantera doesn't actually use f2c. 2005-04-15 21:01 hkmoffa * Cantera/cxx/demos/kinetics1.cpp: Added in the cantera/Cantera.h include file. It seemed to need it to compile in the demo directory of the install directory. 2005-04-13 13:17 dggoodwin * Cantera/python/examples/: equilibrium/adiabatic.py, equilibrium/plotting.py, flames/flame1.py, flames/flame2.py, flames/stflame1.py, kinetics/ratecoeffs.py: updated examples 2005-04-07 02:03 dggoodwin * Cantera/matlab/cantera/buildwin.m: minor changes to SetupCantera 2005-04-02 06:37 dggoodwin * Cantera/python/Cantera/constants.py: changed GasConstant to 1999 CODATA value 2005-04-01 16:29 dggoodwin * tools/doc/: Cantera.cfg, doxyinput/Cantera.txt, doxyinput/build.txt, doxyinput/ctnew.txt, doxyinput/cxx-headers.txt, doxyinput/demo.cpp, doxyinput/demo1.cpp, doxyinput/demo1a.cpp, doxyinput/demoequil.cpp, doxyinput/equildemo.txt, doxyinput/ex1.cpp, doxyinput/except.cpp, doxyinput/exceptions.txt, doxyinput/introcxx.txt, doxyinput/languages.txt, doxyinput/thermo.txt, doxyinput/thermodemo.cpp, doxyinput/thermodemo.txt: new doxygen files 2005-04-01 03:10 dggoodwin * Cantera/src/: IdealGasPhase.h, State.h, ThermoPhase.h, misc.cpp, utilities.h: updated comments 2005-03-30 19:33 hkmoffa * Cantera/src/ThermoPhase.h: Fixed a comment section that incorrectly identified a function as returning a Gibbs energy when it actually returned a Heat capacity. 2005-03-30 18:03 hkmoffa * Makefile.in: Took residual particle Makefile stuff out of this file. 2005-03-30 18:02 hkmoffa * Cantera/Makefile.in: Took residual particle configure stuff out of this file. 2005-03-30 18:00 hkmoffa * config/configure.in: Took residual particle stuff out of this file. 2005-03-23 21:54 hkmoffa * Cantera/src/.cvsignore: Added *.d 2005-03-09 21:48 dggoodwin * Cantera/python/ctml_writer.py: added support for fractional product stoichiometric coefficients in global irreversible reactions 2005-03-05 16:43 dggoodwin * Cantera/src/: LatticeSolidPhase.h, LatticeSolidPhase.cpp: initial import 2005-02-25 13:48 dggoodwin * Makefile.in, config/configure, config/configure.in: g95 changes 2005-02-25 04:52 dggoodwin * Makefile.in, Cantera/python/setup.py.in, config/configure, config/configure.in, tools/src/finish_install.py.in: minor cleanup 2005-02-24 20:01 dggoodwin * Cantera/src/converters/ck2ct.cpp: minor cleanup 2005-02-24 20:01 dggoodwin * Cantera/src/config.h: added check for CANTERA_APP 2005-02-24 20:01 dggoodwin * Cantera/cxx/include/Cantera.h: added definition of CANTERA_APP, which is used in Cantera/src/config.h to control where to find the config file 2005-02-24 19:59 dggoodwin * test_problems/: diamondSurf/runDiamond.cpp, silane_equil/silane_equil.cpp: added #include for file Cantera.h 2005-02-24 19:59 dggoodwin * test_problems/silane_equil/output_blessed.txt: changed output format 2005-02-24 17:54 dggoodwin * tools/src/findtag.py: initial import 2005-02-17 18:35 dggoodwin * apps/MixMaster/: Mix.py, ThermoFrame.py, ThermoProp.py: minor changes 2005-02-17 17:25 dggoodwin * apps/MixMaster/KineticsFrame.py: added scrollbar to reaction window 2005-02-17 07:12 dggoodwin * apps/MixMaster/KineticsFrame.py: changed default reaction path diagram format to SVG 2005-02-10 09:15 dggoodwin * Cantera/src/Makefile.in: minor win32 bug fixes 2005-02-10 09:10 dggoodwin * Cantera/: clib/src/ct.h, matlab/cantera/buildwin.m, matlab/cantera/private/ctmethods.cpp, python/src/pycantera.cpp, src/MultiPhase.cpp, src/config.h, src/converters/ck2ct.cpp: minor win32 bug fixes 2005-02-09 11:26 dggoodwin * Makefile.in, configure, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/python/Cantera/Mixture.py, Cantera/python/Cantera/__init__.py, Cantera/python/Cantera/mixture.py, Cantera/python/examples/equilibrium/adiabatic.py, Cantera/python/examples/equilibrium/plotting.py, Cantera/python/src/ctfuncs.cpp, Cantera/python/src/ctthermo_methods.cpp, Cantera/python/src/methods.h, Cantera/python/src/pycantera.cpp, Cantera/python/src/pyutils.h, tools/src/package4mac.in: support for HTML log files. 2005-02-09 11:23 dggoodwin * Cantera/src/: MultiPhase.cpp, MultiPhaseEquil.cpp, misc.cpp: support for HTML log files. 2005-02-08 17:52 dggoodwin * config/: configure, configure.in: corrected error in g95 options 2005-02-03 22:44 dggoodwin * Cantera/python/examples/equilibrium/adiabatic.py: initial import 2005-02-02 21:07 dggoodwin * test_problems/ck2cti_test/runtest.in: minor output format change 2005-02-02 20:59 dggoodwin * test_problems/ck2cti_test/gri30a_blessed.cti: minor output format change 2005-02-02 20:37 dggoodwin * Cantera/src/config.h: not needed in repository 2005-02-02 20:10 dggoodwin * Cantera/: clib/src/Cabinet.h, clib/src/ctfunc.cpp, clib/src/ctmultiphase.cpp, clib/src/ctonedim.cpp, clib/src/ctreactor.cpp, clib/src/ctrpath.cpp, clib/src/ctxml.cpp, src/config.h: added template<> 2005-02-02 00:27 dggoodwin * Cantera/python/: Makefile.in, Cantera/Phase.py, Cantera/num.py, src/pycantera.cpp: changed numarray/Numeric selection to avoid importing the wrong module 2005-02-01 16:22 dggoodwin * Cantera/python/src/: cantera.def, ct.def, ctflow.def, ctkinetics.def, ctnumerics.def, ctphase.def, ctphase_methods.cpp, ctsurf.def, ctthermo.def, cttransport.def: removed unused files 2005-01-31 19:54 dggoodwin * Cantera/matlab/: Makefile.in, cantera/ck2cti.m, cantera/private/ctfunctions.cpp: added support for ck2cti without requiring external program 2005-01-31 13:20 dggoodwin * Cantera/python/Cantera/ck2cti.py: initial import 2005-01-31 13:18 dggoodwin * Cantera/: clib/src/ct.cpp, clib/src/ct.h, clib/src/ctmultiphase.cpp, clib/src/ctmultiphase.h, python/Makefile.in, python/setup.py.in, python/Cantera/Mixture.py, python/Cantera/mixture.py, python/src/ctfuncs.cpp, python/src/ctmultiphase_methods.cpp, python/src/methods.h: added function ck2cti 2005-01-31 13:18 dggoodwin * Cantera/src/converters/ck2ct.cpp: printf and stream i/o changed to fprintf to allow writing cti file to a file rather than to the standard output 2005-01-31 13:16 dggoodwin * Cantera/src/phasereport.cpp: only print mu for non-zero species 2005-01-29 03:57 dggoodwin * Cantera/clib/src/: Storage.cpp, ct.cpp: corrected a problem with phases with identical names 2005-01-29 03:46 dggoodwin * Cantera/python/Cantera/Kinetics.py: corrected a problem with phases with identical names 2005-01-25 04:48 dggoodwin * ext/: f2c_lapack/Makefile.in, f2c_math/.cvsignore: added files to .cvsignore 2005-01-25 04:41 dggoodwin * ChangeLog, Makefile.in, configure, Cantera/cxx/demos/Makefile.in, Cantera/cxx/demos/demos.cpp, Cantera/cxx/demos/flamespeed.cpp, Cantera/cxx/demos/kin1_blessed.csv, Cantera/cxx/demos/kin1_blessed.dat, Cantera/cxx/demos/kinetics1.cpp, Cantera/cxx/demos/rankine.cpp, Cantera/python/Cantera/liquidvapor.py, Cantera/src/config.h, Cantera/src/misc.cpp, Cantera/src/phasereport.cpp, bin/mixmaster.py, config/configure, config/configure.in, data/inputs/liquidvapor.cti, ext/tpx/.depends, ext/tpx/HFC134a.cpp, ext/tpx/HFC134a.h, ext/tpx/Makefile.in, ext/tpx/subs.h, ext/tpx/utils.cpp, tools/bin/erase: fixed problem with dependencies for ck2cti 2005-01-25 04:38 dggoodwin * tools/src/ck2cti.cpp, Cantera/src/converters/ck2ct.cpp, Cantera/src/converters/ck2ct.h: added validate option 2005-01-24 16:06 dggoodwin * Makefile.in, configure, Cantera/cxx/demos/Makefile.in, Cantera/cxx/demos/demos.cpp, Cantera/cxx/demos/flamespeed.cpp, Cantera/cxx/demos/kinetics1.cpp, Cantera/cxx/demos/rankine.cpp, Cantera/src/config.h, Cantera/src/misc.cpp, ext/tpx/.depends, ext/tpx/utils.cpp, tools/bin/erase: changed C++ demos 2005-01-24 12:32 dggoodwin * Cantera/cxx/demos/: Makefile.in, demos.cpp, flamespeed.cpp, kin1_blessed.csv, kin1_blessed.dat, kinetics1.cpp, rankine.cpp: added program demo to run all demos 2005-01-19 22:22 dggoodwin * data/inputs/: nasa.cti, nasa_condensed.cti, nasa_gas.cti: separated gaseous and condensed-phase species 2005-01-18 15:36 dggoodwin * ext/tpx/HFC134a.h: fixed include error 2005-01-14 14:41 dggoodwin * configure, Cantera/python/Cantera/liquidvapor.py, Cantera/src/phasereport.cpp, bin/mixmaster.py, data/inputs/liquidvapor.cti, ext/f2c_libs/arith.h, ext/tpx/HFC134a.cpp, ext/tpx/HFC134a.h, ext/tpx/Makefile.in, ext/tpx/subs.h, ext/tpx/utils.cpp: added HFC134a 2005-01-13 19:02 hkmoffa * Cantera/src/StoichSubstance.h: Added a "get" in front of some void functions. 2005-01-13 15:02 dggoodwin * Cantera/src/: ChemEquil.h, ThermoPhase.h, config.h, oneD/Domain1D.h, oneD/StFlow.cpp: changed code related to adiabatic flame 2005-01-13 14:58 dggoodwin * Cantera/matlab/cantera/: @ThermoPhase/equilibrate.m, private/thermomethods.cpp: added option to select equil solver 2005-01-13 14:58 dggoodwin * Cantera/matlab/cantera/examples/: catcomb.m, flame1.m, prandtl1.m, test_examples.m: added script to test selected examples without pausing 2005-01-13 01:33 hkmoffa * Cantera/src/ThermoPhase.h: Forgot to add to functions to ThermoPhase.h: getActivityCoefficents() getStandardVolumes() 2005-01-13 00:09 hkmoffa * Cantera/src/: ConstDensityThermo.cpp, ConstDensityThermo.h, GRI_30_Kinetics.cpp, GasKinetics.cpp, GasKinetics.h, IdealGasPhase.cpp, IdealGasPhase.h, StoichSubstance.cpp, StoichSubstance.h, ThermoPhase.h, config.h, oneD/StFlow.cpp, transport/MultiTransport.cpp, transport/TransportFactory.cpp: This delta contains the suggested changes to the ThermoPhase API. It clears up the distinction between the quantities calculated from the standard state and quantitities that are calculated based on the "reference state". The reference state is at a fixed pressure, while the standard state is at the T and P of the solution. The delta also contains changes to the implementation of the Ideal Gas Law. The standard concentration is now defined to be equal to p/RT instead of the previous value of p_ref/RT. Also, as a consequence the returned values of the activities will be equal to the solution mole fractions. Numerically, equilibrium constants and reaction rates are the same up to numerical round-off error. 2005-01-12 17:03 hkmoffa * Cantera/clib/src/Makefile.in: Fixed an error in this Makefile. libclib.a was being installed in the lib directory itself with the name "cantera". Now it is being installed in ctversion/libclib.a 2005-01-12 03:22 hkmoffa * .cvsignore, Makefile.in, Cantera/clib/src/Makefile.in, Cantera/cxx/Makefile.in, Cantera/cxx/demos/Makefile.in, Cantera/src/Kinetics.cpp, Cantera/src/Kinetics.h, Cantera/src/KineticsFactory.cpp, Cantera/src/Makefile.in, Cantera/src/config.h, Cantera/src/ctvector.cpp, Cantera/src/converters/Makefile.in, Cantera/src/oneD/Makefile.in, Cantera/src/transport/Makefile.in, Cantera/src/zeroD/Makefile.in, config/configure, config/configure.in, ext/blas/Makefile.in, ext/cvode/Makefile.in, ext/f2c_blas/Makefile.in, ext/f2c_lapack/Makefile.in, ext/f2c_libs/Makefile.in, ext/f2c_math/Makefile.in, ext/f2c_recipes/Makefile.in, ext/lapack/Makefile.in, ext/math/Makefile.in, ext/recipes/Makefile.in, ext/tpx/Makefile.in, tools/src/Makefile.in, tools/templates/cxx/demo.mak.in: Revision of the Makefiles to eliminate extra work in recompiles. No linking or compilation will be done if not necessary .h files are sent to build/include tree in the lower level makefiles, as a consequence. Kinetics.cpp new file was created by taking routines in KineticsFactory.cpp and placing them in the new file. demo.mak.in now has a CXX_END_LIBS capability. My linux system needs this for some reason. 2005-01-12 03:19 hkmoffa * configure: Changed the default for NEED_NUMERIC from 'n' to 'y' to help with backwards compatibility with previous releases. 2005-01-10 15:57 dggoodwin * tools/doc/python/mkmkdoc.py: initial import 2005-01-09 21:29 dggoodwin * config.h, configure, Cantera/clib/src/ct.cpp, Cantera/clib/src/ctmultiphase.cpp, Cantera/cxx/include/PureFluid.h, Cantera/cxx/src/writelog.cpp, Cantera/python/ctml_writer.py, Cantera/python/winsetup.py, Cantera/python/Cantera/Mixture.py, Cantera/python/Cantera/mixture.py, Cantera/python/Cantera/num.py, Cantera/src/ChemEquil.cpp, Cantera/src/ChemEquil.h, Cantera/src/Constituents.cpp, Cantera/src/ImplicitChem.cpp, Cantera/src/InterfaceKinetics.h, Cantera/src/Makefile.in, Cantera/src/MultiPhase.cpp, Cantera/src/MultiPhase.h, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/MultiPhaseEquil.h, Cantera/src/PureFluidPhase.h, Cantera/src/SpeciesThermoFactory.cpp, Cantera/src/ThermoFactory.cpp, Cantera/src/config.h, Cantera/src/ct2ctml.cpp, Cantera/src/global.h, Cantera/src/importCTML.h, Cantera/src/converters/CKParser.cpp, Cantera/src/oneD/StFlow.cpp, Cantera/src/transport/Makefile.in, Cantera/src/zeroD/Makefile.in, Cantera/src/zeroD/flowControllers.h, apps/MixMaster/DataFrame.py, apps/MixMaster/DataGraph.py, apps/MixMaster/Mix.py, apps/MixMaster/main.py, bin/mixmaster.py, data/inputs/graphite.cti, data/inputs/water.cti, tools/src/package4mac.in, tools/testtools/csvdiff.cpp: trunk changes merged in 2005-01-09 20:32 dggoodwin * tools/testtools/csvdiff.cpp: modified csvdiff to allow larger error bounds when solution is changing rapidly 2005-01-09 19:58 dggoodwin * test_problems/silane_equil/output_blessed.txt: updated blessed output due to format change 2005-01-08 23:27 dggoodwin * data/inputs/: graphite.cti, water.cti: added water.cti 2005-01-07 11:26 dggoodwin * Cantera/: clib/src/ct.cpp, clib/src/ct.h, cxx/demos/Makefile.install, cxx/demos/rankine.cpp, cxx/src/writelog.cpp, src/ChemEquil.h, src/Constituents.cpp, src/DenseMatrix.cpp, src/ImplicitChem.cpp, src/InterfaceKinetics.cpp, src/InterfaceKinetics.h, src/Makefile.in, src/PureFluidPhase.cpp, src/PureFluidPhase.h, src/ShomateThermo.h, src/ThermoFactory.cpp, src/config.h, src/ct2ctml.cpp, src/global.h, src/importCTML.h, src/converters/CKParser.cpp, src/converters/CKParser.h, src/converters/CKReader.h, src/converters/Group.h, src/converters/ckr_utils.cpp, src/converters/ckr_utils.h, src/converters/config.h, src/converters/writelog.cpp, src/oneD/StFlow.cpp, src/transport/Makefile.in, src/zeroD/Makefile.in, src/zeroD/flowControllers.h: merged changes from branch 2005-01-07 10:58 dggoodwin * Cantera/src/MultiPhase.cpp: initial import 2005-01-07 10:55 dggoodwin * Cantera/: src/PureFluidPhase.cpp, src/PureFluidPhase.h, src/ThermoFactory.cpp, clib/src/ct.cpp, python/Cantera/num.py: changed class PureFluid to PureFluidPhase 2005-01-07 10:46 dggoodwin * Cantera/cxx/include/PureFluid.h: merged from branch 2005-01-07 10:43 dggoodwin * Cantera/cxx/include/PureFluid.h: initial import 2005-01-07 10:39 dggoodwin * Cantera/cxx/demos/: Makefile.install, rankine.cpp: added open rankine example 2005-01-07 00:42 dggoodwin * config.h, winconfig.h, Cantera/python/Cantera/num.py, Cantera/src/config.h: cleanup 2005-01-07 00:30 dggoodwin * Cantera/cxx/demos/flamespeed.cpp, examples/cxx/transport_example1.cpp: minor cleanup 2005-01-06 13:49 dggoodwin * ChangeLog, README.txt, Cantera/clib/src/ctmultiphase.cpp, Cantera/cxx/demos/flamespeed.cpp, Cantera/python/Cantera/__init__.py, Cantera/python/examples/flame1.py, Cantera/python/examples/flame2.py, Cantera/python/examples/npflame1.py, Cantera/python/examples/stflame1.py, Cantera/src/ChemEquil.h, Cantera/src/Makefile.in, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/ct2ctml.cpp, Cantera/src/ctvector.cpp, Cantera/src/oneD/StFlow.cpp, examples/cxx/transport_example1.cpp, ext/tpx/Sub.cpp: trunk changes merged into branch 2005-01-06 13:32 dggoodwin * test_problems/silane_equil/output_blessed.txt: updated blessed output due to format change 2005-01-06 12:59 dggoodwin * Cantera/python/Cantera/: Mixture.py, mixture.py: re-added 2005-01-06 12:58 dggoodwin * Cantera/python/Cantera/: Mixture.py, __init__.py, num.py, solve.py, units.py, OneD/__init__.py: merged trunk 2005-01-06 12:09 dggoodwin * Cantera/src/ctvector.cpp: fixed memory leak in operator= 2005-01-06 12:08 dggoodwin * Cantera/src/oneD/StFlow.cpp: fixed memory leak in showSolution 2005-01-05 22:04 dggoodwin * README.txt, config.h, Cantera/clib/src/ctmultiphase.cpp, Cantera/python/Cantera/__init__.py, Cantera/python/Cantera/solve.py, Cantera/python/Cantera/units.py, Cantera/python/Cantera/OneD/__init__.py, Cantera/python/examples/flame1.py, Cantera/python/examples/flame2.py, Cantera/python/examples/npflame1.py, Cantera/python/examples/stflame1.py, Cantera/src/ChemEquil.h, Cantera/src/Makefile.in, Cantera/src/MultiPhase.h, Cantera/src/MultiPhaseEquil.cpp, Cantera/src/config.h, Cantera/src/ct2ctml.cpp, examples/cxx/transport_example1.cpp: minor cleanup 2005-01-05 13:36 dggoodwin * INSTALLING, README, README.txt: removed unneeded files 2005-01-05 02:28 dggoodwin * ext/tpx/Sub.cpp: fixed problem with starting guess for T in Tsat that caused an exception with T > Tcrit on entry 2005-01-04 21:32 hkmoffa * Cantera/src/transport/Makefile.in: New Makefile Format: Installs .h files and libs at the same time. 2005-01-04 21:30 hkmoffa * Cantera/src/zeroD/Makefile.in: New Makefile format: installs .h files and libs at the same time. 2005-01-04 00:40 hkmoffa * Cantera/python/Cantera/__init__.py: Took out the reference to ctdata. ATM, this causes all python jobs to fail. 2005-01-04 00:12 hkmoffa * Cantera/src/ct2ctml.cpp: ifdeffed out a static function that was not used. 2004-12-18 16:16 dggoodwin * Cantera/src/converters/: CKParser.cpp, CKReader.h, config.h: minor cleanup 2004-12-16 07:56 dggoodwin * Cantera/src/MultiPhase.cpp: initial import 2004-12-13 15:58 dggoodwin * tools/bin/cvs2cl.pl: updated version 2004-12-13 15:42 dggoodwin * configure, Cantera/src/MultiPhase.h, config/configure, config/configure.in: misc cleanup 2004-12-13 15:36 dggoodwin * Makefile.in: added test export-win 2004-12-10 20:36 dggoodwin * Cantera/python/Cantera/OneD/: BurnerDiffFlame.py, BurnerFlame.py, CounterFlame.py, StagnationFlow.py, onedim.py: modified python files to use either numarray or Numeric 2004-12-10 20:32 dggoodwin * Cantera/python/: Cantera/Func.py, Cantera/Kinetics.py, Cantera/Mixture.py, Cantera/Phase.py, Cantera/Reactor.py, Cantera/SurfacePhase.py, Cantera/ThermoPhase.py, Cantera/Transport.py, Cantera/excel.py, Cantera/schem.py, Cantera/solve.py, Cantera/stoich.py, Cantera/tecplot.py, examples/isentropic.py: modified python files to use either numarray or Numeric 2004-12-09 23:10 dggoodwin * Cantera/src/: MultiPhase.h, MultiPhaseEquil.cpp, MultiPhaseEquil.h: fixed convergence problem in MultiPhaseEquil 2004-12-02 17:48 dggoodwin * data/inputs/: graphite.cti, silicon.cti, silicon_carbide.cti: initial import 2004-12-02 00:01 dggoodwin * config.h.in, Cantera/clib/src/Makefile.in, Cantera/clib/src/ctmultiphase.cpp, Cantera/clib/src/ctmultiphase.h, Cantera/cxx/include/equilibrium.h, Cantera/python/Cantera/Mixture.py, Cantera/python/src/ctmultiphase_methods.cpp, Cantera/python/src/methods.h, Cantera/python/src/pycantera.cpp, Cantera/src/DenseMatrix.cpp, Cantera/src/Makefile.in, Cantera/src/phasereport.cpp: support for multiphase equilibrium 2004-12-01 23:57 dggoodwin * Cantera/src/: MultiPhaseEquil.h, MultiPhaseEquil.cpp: support for multiphase equilibrium 2004-12-01 23:56 dggoodwin * Cantera/src/MultiPhase.h: multiphase mixtures 2004-11-24 04:08 dggoodwin * Cantera/src/importCTML.cpp: changed buildSolutionFromXML to use get_XML_NameID instead of get_XML_Node 2004-11-15 21:52 hkmoffa * Cantera/clib/src/ct.cpp: Added a static_cast. 2004-11-15 21:51 hkmoffa * Cantera/clib/src/ct.cpp: Added a return statement. 2004-11-15 04:17 dggoodwin * Cantera/cxx/demos/flamespeed.cpp: initial import 2004-11-15 03:33 dggoodwin * Makefile.in, configure, Cantera/cxx/include/equilibrium.h, Cantera/fortran/src/Makefile.in, Cantera/python/ctml_writer.py, Cantera/src/ChemEquil.cpp, Cantera/src/ChemEquil.h, Cantera/src/ct_defs.h, Cantera/src/ctvector.cpp, Cantera/src/ctvector.h, config/configure, config/configure.in, ext/tpx/RedlichKwong.cpp: changed f90 mod file handling in Makefiles 2004-11-13 00:37 dggoodwin * Cantera/src/oneD/: Domain1D.h, Sim1D.cpp, Sim1D.h, StFlow.cpp, StFlow.h, boundaries1D.cpp: changes by Karl Meredith to implement adiabatic, freely-propagating flames 2004-11-02 11:23 dggoodwin * Cantera/src/: ImplicitChem.h, ImplicitChem.cpp: re-added file 2004-10-19 12:47 dggoodwin * Cantera/src/xml.h: added 'const' to 'write' 2004-10-19 12:44 dggoodwin * Cantera/src/xml.cpp: changed exception XML_NoChild to print offending XML_Node. 2004-10-19 12:43 dggoodwin * Cantera/src/transport/TransportFactory.cpp: changed reading of transport data from XML tree so that species with no transport data (e.g. surface species) do not cause an exception to be thrown because the have no 'transport' child element. 2004-10-18 21:52 hkmoffa * bin/install_tsc.in: Check for destination directory existing. 2004-10-16 12:12 dggoodwin * Cantera/python/winsetup.py: initial import 2004-10-16 01:10 dggoodwin * Cantera/: src/ct2ctml.cpp, src/global.h, src/logger.h, src/misc.cpp, matlab/cantera/private/ctmethods.cpp, matlab/cantera/private/mllogger.h, python/src/pycantera.cpp, python/src/pylogger.h, python/src/pyutils.h, python/src/writelog.cpp: added environment-specific classes to write log files 2004-10-14 06:24 dggoodwin * tools/src/: package4mac.in, postflight: Mac install script 2004-10-10 22:46 dggoodwin * config.h.in, Cantera/src/DenseMatrix.cpp, Cantera/src/GasKinetics.cpp, Cantera/src/ctvector.cpp, Cantera/src/ctvector.h, Cantera/src/converters/CKParser.cpp, Cantera/src/converters/writelog.cpp, Cantera/src/oneD/StFlow.cpp, Cantera/src/transport/TransportFactory.cpp, Cantera/src/transport/TransportParams.h, ext/f2c_libs/f2c.h, ext/f2c_recipes/simplx.c: changes to make type integer compatible with f2c 2004-10-10 14:11 dggoodwin * Cantera/src/importCTML.cpp: moved arrays used to check for dup rxns into a class to avoid problems with initialization on some systems (FreeBSD) 2004-10-10 14:09 dggoodwin * Cantera/src/: global.h, misc.cpp: added sleep function 2004-10-10 14:09 dggoodwin * Cantera/src/ct2ctml.cpp: added sleep before call to python 2004-10-09 20:58 dggoodwin * ext/tpx/RedlichKwong.h: removed use of pow 2004-10-09 20:55 dggoodwin * ext/tpx/RedlichKwong.cpp: eliminated use of pow 2004-10-09 17:45 dggoodwin * ext/tpx/: RedlichKwong.cpp, RedlichKwong.h: initial import 2004-10-09 17:27 dggoodwin * tools/bin/cvs2cl.pl: initial import 2004-10-09 17:21 dggoodwin * Cantera/python/Cantera/Transport.py: added method molarFluxes 2004-10-09 17:19 dggoodwin * Cantera/python/Cantera/SurfacePhase.py: minor cleanup 2004-10-09 17:18 dggoodwin * Cantera/python/src/pyutils.h: corrected problem with truncation of error messages 2004-10-09 17:17 dggoodwin * Cantera/python/src/cttransport_methods.cpp: added py_getMolarFluxes 2004-10-09 17:15 dggoodwin * Cantera/python/Cantera/ThermoPhase.py: added import statement 2004-10-09 17:13 dggoodwin * Cantera/matlab/: Makefile.in, cantera/examples/rankine.m, cantera/private/ctfunctions.cpp, cantera/private/ctmatutils.h, cantera/private/phasemethods.cpp, cantera/private/thermomethods.cpp: added support for exceptions from tpx 2004-10-09 17:07 dggoodwin * Cantera/src/: Phase.h, Phase.cpp: added const in restoreState 2004-10-09 17:05 dggoodwin * Cantera/src/transport/TransportFactory.cpp: minor cleanup 2004-10-09 17:03 dggoodwin * Cantera/src/transport/: MultiTransport.h, MultiTransport.cpp: added methods getMolarFluxes and getMassFluxes 2004-10-09 17:00 dggoodwin * Cantera/src/: importCTML.cpp, xml.cpp: cleanup 2004-10-09 16:58 dggoodwin * Cantera/src/misc.cpp: moved exception constructor definitions here from ctexceptions.h 2004-10-09 16:57 dggoodwin * Cantera/src/ctexceptions.h: moved constructor definitions to misc.cpp 2004-10-09 16:55 dggoodwin * Cantera/src/funcs.cpp: added include file 2004-10-09 16:48 dggoodwin * Cantera/src/PureFluidPhase.cpp: moved most method definitions here from header file. 2004-10-09 16:47 dggoodwin * Cantera/src/PureFluidPhase.h: moved most method definitions to PureFluidPhase.cpp 2004-10-08 19:09 hkmoffa * Cantera/src/transport/TransportParams.h: Added an include for XML_Writer.h 2004-10-08 19:09 hkmoffa * Cantera/src/transport/MMCollisionInt.cpp: Added an XML_writer include 2004-10-05 19:56 dggoodwin * ext/tpx/Sub.h: added exceptions for error handling 2004-10-05 19:55 dggoodwin * ext/tpx/Sub.cpp: Added exceptions to handle errors. 2004-10-05 18:20 hkmoffa * config/configure.in: Added rule to make bin/install_tsc 2004-10-05 18:15 hkmoffa * bin/: .cvsignore, install_tsc.in: Utility script to install a header file, only if the modified date has changed. 2004-10-03 10:30 dggoodwin * Cantera/src/XML_Writer.h: initial import 2004-10-03 10:28 dggoodwin * Cantera/src/transport/TransportBase.h: added method getMassFluxes 2004-10-03 10:24 dggoodwin * Cantera/src/xml.h: removed class XML_Writer 2004-10-03 09:41 dggoodwin * Cantera/src/xml.cpp: added line numbers to exception error messages 2004-10-02 09:25 dggoodwin * Cantera/src/ct2ctml.cpp: minor cleanup 2004-10-01 21:38 hkmoffa * Cantera/matlab/.cvsignore: Added a file. 2004-10-01 21:37 hkmoffa * Cantera/matlab/setup_winmatlab.py: Removing a file that gets automatically created during the configuration process. 2004-10-01 21:34 hkmoffa * Makefile.in: Took out automatic deletion of static libraries at the beginning of every make operation. 2004-10-01 21:31 hkmoffa * config/configure.in: Added more handling of the PYTHON_CMD variable. 2004-10-01 21:30 hkmoffa * configure: Uncommented out PYTHON_CMD. It's now set to "default", if unspecified. Then, this default is treated in config/configure with special code. 2004-09-24 22:16 hkmoffa * Makefile.in, configure: Added USE_DLL variable and its controls. Takes care of a bug that krept in for compiles with MSVC++v.6.0 while trying to stand up MSVC++v7.0 compiles. 2004-09-24 22:15 hkmoffa * config/configure.in: Added USE_CLIB_DLL evaluation. 2004-09-24 22:14 hkmoffa * Cantera/python/Makefile.in: took care of problem with clib.dll for MSVC6.0 2004-09-20 12:18 dggoodwin * Cantera/src/: EdgeKinetics.cpp, EdgeKinetics.h, ReactionData.h, importCTML.cpp, converters/ck2ct.cpp: added ability to specify beta for charge transfer reactions 2004-09-17 00:08 hkmoffa * Makefile.in: Added dll install 2004-09-16 23:43 hkmoffa * test_problems/python/runtest: Fixed an error in the default specifation of python executable 2004-09-16 19:57 hkmoffa * tools/src/ck2cti.cpp: Added an id string. 2004-09-16 19:52 hkmoffa * test_problems/: diamondSurf/Makefile.in, silane_equil/Makefile.in, surfkin/Makefile.in: turned off automatic compilation during make test for windows machines. 2004-09-16 19:51 hkmoffa * test_problems/cxx_ex/: .cvsignore, gri30.xml, kin1_blessed_win.csv, kin2_blessed_win.csv, runtest, silane.xml: Made the blessed files machine dependent for this test. 2004-09-16 19:30 hkmoffa * test_problems/ck2cti_test/gri30_tran.dat: Changed a LJ value to prevent roundoff error from leading to an error failure 2004-09-16 19:13 hkmoffa * test_problems/ck2cti_test/: .cvsignore, runtest.in: Added a step to change 3 exponent expressions into 2 exponenet expressions. 2004-09-16 19:06 hkmoffa * Cantera/src/converters/ck2ct.cpp: Took out a print statement that was causing a test to fail. 2004-08-28 18:13 dggoodwin * tools/bin/erase: script to remove a file from the repository 2004-08-28 18:12 dggoodwin * Cantera/src/: ArrayViewer.h, DenseMatrix.cpp, EdgeKinetics.h, GRI_30_Kinetics.h, GasKineticsWriter.h, InterfaceKinetics.h, PureFluidPhase.h, ReactionStoichMgr.h, SimpleThermo.h, SpeciesThermoMgr.h, StoichManager.h, StoichSubstance.h, ThermoPhase.h, newton_utils.cpp, converters/CKParser.cpp, converters/Group.h, converters/Reaction.h, converters/atomicWeightDB.cpp, converters/config.h, converters/filter.cpp, converters/thermoFunctions.cpp, oneD/Jac1D.h, oneD/Newton1D.h, oneD/Solid1D.cpp, oneD/newton_utils.cpp, zeroD/Reactor.cpp, zeroD/Reservoir.h: cleanup 2004-08-27 22:37 hkmoffa * .cvsignore: Added 2 files. 2004-08-27 22:35 hkmoffa * bin/.cvsignore: added some windows tmp files 2004-08-27 22:21 hkmoffa * test_problems/python/runtest: Currently, linux and MSVC are producing the same results on this test problem. I changed runtest to substitute the right machine dependent blessed file. 2004-08-27 22:08 hkmoffa * tools/testtools/: csvdiff.cpp, mdp_allo.cpp, mdp_allo.h: Changes to support MSVC 2004-08-27 22:03 hkmoffa * tools/testtools/csvdiff.cpp: Added a getopt() capability for WINMSC 2004-08-27 18:45 hkmoffa * config/configure.in: Added a default 0 to BUILD_PARTICLES value 2004-08-10 22:39 hkmoffa * test_problems/python/: .cvsignore, flame1_blessed_linux.csv, runtest: Added a machine dependent blessed file capability 2004-08-10 20:18 hkmoffa * config/configure.in: Added support for the new python_win_prefix variable. -> This needs to be backslashed. -> all other variables on all other platforms (and on OS_IS_WIN) need to be forward slashed. 2004-08-10 20:16 hkmoffa * Cantera/python/Makefile.in: added python_win_prefix variable. On windows this needs to be a backslash, unlike all the other variables which need to be regular slashes. Therefore, I had to create a new variable to do this. 2004-08-10 19:28 hkmoffa * config/configure.in: Several changes: CYGWIN is now undefined, not just 0 WINMSVC is now undefined, not just 0 OS_IS_CYGWIN is now 0 when OS_IS_WIN = 1 2004-08-10 03:31 hkmoffa * .cvsignore: added a dir. 2004-08-10 03:29 hkmoffa * test_problems/python/runtest: Tried to add a default $1, so that it runs like all the rest. 2004-08-10 03:15 hkmoffa * Cantera/python/.cvsignore: added a file. 2004-08-10 03:12 hkmoffa * tools/src/cti2ctml.cpp: MSVC warning message 2004-08-10 03:11 hkmoffa * examples/cxx/: example_utils.h, examples.cpp: MSVC experienced an error on this code. fixed it. 2004-08-10 03:09 hkmoffa * config/: .cvsignore, configure.in: arith.h needs to be created for win 2004-08-10 03:08 hkmoffa * Cantera/python/Makefile.in: clib.dll needs to be copied by hand 2004-08-10 03:06 hkmoffa * test_problems/diamondSurf/: .cvsignore, runtest: MSVC differences no longer matter. 2004-08-10 03:01 hkmoffa * Cantera/.cvsignore: Added a file. 2004-08-10 03:00 hkmoffa * bin/get_arch: Added cygwin support 2004-08-10 02:23 hkmoffa * ext/f2c_libs/: .cvsignore, arith.hwin32: added a file. 2004-08-10 02:22 hkmoffa * ext/f2c_libs/f2c.h: Added windows specific definition block 2004-08-10 02:20 hkmoffa * ext/f2c_lapack/dlamch.c: Added a stdio.h reference. 2004-08-10 01:58 hkmoffa * test_problems/silane_equil/: .cvsignore, runtest: MSVS differences are now eliminated via a sed script. 2004-08-10 01:45 hkmoffa * bin/exp3to2.sh: new shell script used for test programs. 2004-08-10 00:21 hkmoffa * test_problems/surfkin/: .cvsignore, runtest: added -w option to diff, so that dos unix text file differences aren't important. 2004-08-10 00:06 hkmoffa * test_problems/diamondSurf/.cvsignore: Added pc file. 2004-08-09 23:28 hkmoffa * ext/f2c_blas/xerbla.c: added an include 2004-08-09 22:51 hkmoffa * ext/f2c_libs/signal1.h: added this file for convenience 2004-08-09 22:17 hkmoffa * ext/f2c_libs/sysdep1.h: Added this file in. It is recreated during linux makes, but vc++ makes don't create it. 2004-08-09 19:41 hkmoffa * config/configure.in: Changed cygpath -a -w to cygpath -a -m. This causes backslashes to be replaced with regular slashes. Backslashes in strings were causing a lot of problems, as they are interpreted as escape sequences. Regular slashes in c++ on the pc operate just like backslashes in all cases. 2004-08-09 19:38 hkmoffa * Cantera/src/ct2ctml.cpp: Got rid of msvc++ warning message. 2004-08-09 18:54 hkmoffa * Cantera/.cvsignore: added cads 2004-08-09 18:50 hkmoffa * test_problems/surfkin/.cvsignore: Added files 2004-08-09 17:12 hkmoffa * Cantera/python/tutorial/.cvsignore: Changed the name of a file. 2004-08-09 17:11 hkmoffa * Cantera/python/tutorial/.cvsignore: Added a file 2004-08-09 07:10 dggoodwin * Makefile.in, configure, Cantera/fortran/src/Makefile.in, Cantera/python/setup.py.in, Cantera/src/DenseMatrix.cpp, Cantera/src/DenseMatrix.h, Cantera/src/ctlapack.h, Cantera/src/ctvector.cpp, Cantera/src/ctvector.h, Cantera/src/misc.cpp, config/configure, config/configure.in, ext/math/fdump.f: improvements to the configuration process 2004-08-07 01:09 hkmoffa * test_problems/surfkin/surfdemo.cpp: Added a return statement. 2004-08-07 01:00 hkmoffa * ext/tpx/ck_gas.h: fixed a few vc++ errors. 2004-08-07 00:54 hkmoffa * Cantera/src/ct2ctml.cpp: added some more debugging stuff. 2004-08-07 00:23 hkmoffa * ext/f2c_libs/Makefile.in: Fixed an error on cygwin 2004-08-06 23:56 hkmoffa * ext/math/Makefile.in: Added the all: target. 2004-08-06 23:53 hkmoffa * config/configure.in, configure: Added support for build_with_f2c. 2004-08-06 23:52 hkmoffa * ext/: Makefile.in, blas/Makefile.in, cvode/Makefile.in, f2c_blas/Makefile.in, f2c_libs/Makefile.in, f2c_math/Makefile.in, lapack/Makefile.in, tpx/.cvsignore, tpx/Makefile.in: Fixed makefiles within the ext directory. Added support for build_with_f2c. 2004-08-06 23:50 hkmoffa * ext/recipes/Makefile.in: Added a depends rule 2004-08-06 23:31 hkmoffa * config/.cvsignore: Added a dir. 2004-08-06 23:29 hkmoffa * examples/cxx/.cvsignore: Added more files. 2004-08-06 23:05 hkmoffa * tools/templates/f90/.cvsignore: Started this file. 2004-08-06 23:03 dggoodwin * Makefile.in: fixed Fortran module install bug 2004-08-06 23:01 hkmoffa * Cantera/python/examples/.cvsignore: Added this file. 2004-08-06 23:00 hkmoffa * examples/cxx/.cvsignore: Added 3 files. 2004-08-06 22:58 hkmoffa * apps/MixMaster/: .cvsignore, Units/.cvsignore: Added *.pyc rule to .cvsignore 2004-08-06 22:56 hkmoffa * Cantera/user/.cvsignore: Added Makefile. 2004-08-06 22:55 hkmoffa * Cantera/fortran/src/Makefile.in: Changed the suffix rule format. 2004-08-06 22:51 hkmoffa * Cantera/src/: ct2ctml.cpp, misc.cpp: Added the "sleep" system command buf fix for the cygwin environment. Added debugging printouts for the DEFINE DEBUG_PATH. 2004-08-06 22:31 hkmoffa * Cantera/src/Makefile.in: Added a commented out capability to turn on DEBUG_PATHS, which is used to debug IO data issues. 2004-08-06 22:29 hkmoffa * config.h.in: Added 2 defs: CYGWIN WINMSVC to indicate environments. Used to support putting in sleep commands into ct2ctml. 2004-08-06 22:26 hkmoffa * test_problems/: cxx_ex/.cvsignore, surfkin/.cvsignore, surfkin/surfdemo.cpp: Changed required file from gri30.xml to gri30.cti. 2004-08-06 22:25 hkmoffa * test_problems/python/.cvsignore: Added a file. 2004-08-06 22:22 hkmoffa * config/configure.in: Added a check to see if the fortran 90 compiler is available. Added a few defines to config.h. This is needed to implement the fix to the directory sync problem I found on cygwin. 2004-08-06 17:45 hkmoffa * Cantera/src/Makefile.in: Fixed the format of the SUFFIX makefile command. 2004-08-05 23:32 hkmoffa * bin/get_arch: Simple shell script to return the architecture. It is to be used on test problems which produce slightly different results on different platforms. 2004-08-05 21:25 hkmoffa * ext/cvode/source/nvector.c: Added brackets. 2004-08-05 21:23 hkmoffa * ext/math/Makefile.in: Fixed the SUFFIX object 2004-08-05 21:22 hkmoffa * ext/math/mach.cpp: Added a _i1mach_ target 2004-08-05 21:16 hkmoffa * ext/f2c_blas/Makefile.in: Slight change 2004-08-05 21:15 hkmoffa * ext/f2c_math/: .cvsignore, Makefile.in, cblas.h, daux.c, ddaspk.c, dgbefa.c, dgbsl.c, dgefa.c, dgesl.c, dp1vlu.c, dpcoef.c, dpolft.c, fdump.c, gmres.h, idamax.c, j4save.c, mach.cpp, mkl_cblas.h, pcoef.c, polfit.c, pvalue.c, xercnt.c, xerhlt.c, xermsg.c, xerprn.c, xersve.c, xgetua.c: First commit of this directory 2004-08-05 19:51 hkmoffa * ext/f2c_blas/blaswrap.h: Added a file. 2004-08-05 19:49 hkmoffa * ext/f2c_blas/: .cvsignore, Makefile.in, dasum.c, daxpy.c, dcabs1.c, dcopy.c, ddot.c, dgbmv.c, dgemm.c, dgemv.c, dger.c, dnrm2.c, drot.c, drotg.c, drotm.c, drotmg.c, dsbmv.c, dscal.c, dsdot.c, dspmv.c, dspr.c, dspr2.c, dswap.c, dsymm.c, dsymv.c, dsyr.c, dsyr2.c, dsyr2k.c, dsyrk.c, dtbmv.c, dtbsv.c, dtpmv.c, dtpsv.c, dtrmm.c, dtrmv.c, dtrsm.c, dtrsv.c, dzasum.c, dznrm2.c, idamax.c, isamax.c, lsame.c, xerbla.c: First commit for this directory 2004-08-05 19:24 hkmoffa * ext/f2c_lapack/: .cvsignore, Makefile.in, blaswrap.h, dbdsqr.c, dgbrfs.c, dgbsv.c, dgbsvx.c, dgbtf2.c, dgbtrf.c, dgbtrs.c, dgebak.c, dgebal.c, dgebd2.c, dgebrd.c, dgelq2.c, dgelqf.c, dgels.c, dgelsd.c, dgelss.c, dgelsx.c, dgelsy.c, dgeqr2.c, dgeqrf.c, dgetf2.c, dgetrf.c, dgetri.c, dgetrs.c, dlabad.c, dlabrd.c, dlacpy.c, dlamch.c, dlange.c, dlapy2.c, dlarf.c, dlarfb.c, dlarfg.c, dlarft.c, dlartg.c, dlas2.c, dlascl.c, dlaset.c, dlasq1.c, dlasq2.c, dlasq3.c, dlasq4.c, dlasq5.c, dlasq6.c, dlasr.c, dlasrt.c, dlassq.c, dlasv2.c, dlaswp.c, dorg2r.c, dorgbr.c, dorgl2.c, dorglq.c, dorgqr.c, dorm2r.c, dormbr.c, dorml2.c, dormlq.c, dormqr.c, drscl.c, dtrti2.c, dtrtri.c, ieeeck.c, ilaenv.c, lsame.c: First commit of this directory 2004-08-05 19:04 dggoodwin * Cantera/fortran/src/cantera_funcs.f90, Cantera/fortran/src/fct.cpp, tools/templates/f90/demo.f90: minor changes to fortran files 2004-08-05 18:42 dggoodwin * configure, Cantera/matlab/setup_winmatlab.py, Cantera/src/SpeciesThermoFactory.cpp, Cantera/src/oneD/StFlow.cpp, Cantera/src/oneD/StFlow.h, config/configure, config/configure.in: minor cleanup 2004-08-05 02:18 hkmoffa * ext/f2c_libs/: .cvsignore, Makefile.in, abort_.c, arithchk.c, backspac.c, c_abs.c, c_cos.c, c_div.c, c_exp.c, c_log.c, c_sin.c, c_sqrt.c, cabs.c, close.c, d_abs.c, d_acos.c, d_asin.c, d_atan.c, d_atn2.c, d_cnjg.c, d_cos.c, d_cosh.c, d_dim.c, d_exp.c, d_imag.c, d_int.c, d_lg10.c, d_log.c, d_mod.c, d_nint.c, d_prod.c, d_sign.c, d_sin.c, d_sinh.c, d_sqrt.c, d_tan.c, d_tanh.c, derf_.c, derfc_.c, dfe.c, dolio.c, dtime_.c, due.c, ef1asc_.c, ef1cmc_.c, endfile.c, erf_.c, erfc_.c, err.c, etime_.c, exit_.c, f2c.h, f2c.h0, f2ch.add, f77_aloc.c, f77vers.c, fio.h, fmt.c, fmt.h, fmtlib.c, fp.h, ftell64_.c, ftell_.c, getarg_.c, getenv_.c, h_abs.c, h_dim.c, h_dnnt.c, h_indx.c, h_len.c, h_mod.c, h_nint.c, h_sign.c, hl_ge.c, hl_gt.c, hl_le.c, hl_lt.c, i77vers.c, i_abs.c, i_dim.c, i_dnnt.c, i_indx.c, i_len.c, i_mod.c, i_nint.c, i_sign.c, iargc_.c, iio.c, ilnw.c, inquire.c, l_ge.c, l_gt.c, l_le.c, l_lt.c, lbitbits.c, lbitshft.c, lio.h, lread.c, lwrite.c, main.c, open.c, pow_ci.c, pow_dd.c, pow_di.c, pow_hh.c, pow_ii.c, pow_qq.c, pow_ri.c, pow_zi.c, pow_zz.c, qbitbits.c, qbitshft.c, r_abs.c, r_acos.c, r_asin.c, r_atan.c, r_atn2.c, r_cnjg.c, r_cos.c, r_cosh.c, r_dim.c, r_exp.c, r_imag.c, r_int.c, r_lg10.c, r_log.c, r_mod.c, r_nint.c, r_sign.c, r_sin.c, r_sinh.c, r_sqrt.c, r_tan.c, r_tanh.c, rawio.h, rdfmt.c, rewind.c, rsfe.c, rsli.c, rsne.c, s_cat.c, s_cmp.c, s_copy.c, s_paus.c, s_rnge.c, s_stop.c, sfe.c, sig_die.c, signal1.h0, signal_.c, signbit.c, sue.c, sysdep1.h0, system_.c, typesize.c, uio.c, uninit.c, util.c, wref.c, wrtfmt.c, wsfe.c, wsle.c, wsne.c, xwsne.c, z_abs.c, z_cos.c, z_div.c, z_exp.c, z_log.c, z_sin.c, z_sqrt.c: First commit of f2c library directory 2004-08-05 01:57 hkmoffa * ext/f2c_recipes/: .cvsignore, Makefile.in, simp1.c, simp2.c, simp3.c, simplx.c, splie2.c, splin2.c, spline.c, splint.c: Initial commit of this directory. -> f2c option 2004-08-04 13:21 dggoodwin * Cantera/fortran/src/: cantera_xml.f90, fctxml_interface.f90, genf.py: XML module 2004-08-03 22:49 hkmoffa * bin/rm_cvsignore: Added runtest to the list of files not to whack. 2004-08-03 22:21 hkmoffa * test_problems/Makefile.in: Added endif's. This was causing an error exit. 2004-08-03 18:32 dggoodwin * test_problems/silane_equil/output_blessed.txt: updated blessed file due to change in warning output format 2004-08-03 18:15 dggoodwin * test_problems/: Makefile.in, python/.cvsignore, python/Makefile.in, python/diamond_blessed.csv, python/flame1_blessed.csv, python/runtest: added Python test problems 2004-08-03 17:18 dggoodwin * Cantera/python/Cantera/OneD/BurnerDiffFlame.py: burner-stabilized flame with reservoir outlet condition 2004-08-03 13:16 dggoodwin * Makefile.in, configure, Cantera/cxx/src/writelog.cpp, Cantera/matlab/cantera/ck2cti.m, Cantera/matlab/cantera/private/write.cpp, Cantera/python/src/writelog.cpp, Cantera/src/global.h, config/configure, config/configure.in: cleanup 2004-08-03 12:36 dggoodwin * Cantera/src/: IdealGasThermo.cpp, ImplicitChem.cpp, Makefile.in, SolidCompound.cpp, importSurfChem.cpp, surfKinetics.cpp: cleanup 2004-08-03 11:09 dggoodwin * Cantera/src/: Constituents.cpp, DenseMatrix.h, EOS_TPX.h, EdgePhase.h, GRI30.h, IdealGasThermo.h, InterfaceKinetics.cpp, Makefile.in, NasaThermo.h, ReactionData.h, Resid.h, RxnRates.h, ShomateThermo.h, SimpleThermo.h, SolidCompound.h, SpeciesThermo.h, SpeciesThermoFactory.cpp, SpeciesThermoMgr.h, StoichManager.h, exceptions.h, fitPoly.h, pureSubstances.h, surfKinetics.h, transportModels.h, xml.cpp: removed unused files 2004-08-01 23:33 dggoodwin * Cantera/fortran/src/fctxml.cpp: initial import 2004-08-01 18:43 dggoodwin * Cantera/matlab/cantera/@ThermoPhase/speciesIndex.m: added support for cell arrays of species names 2004-08-01 18:43 dggoodwin * Cantera/matlab/cantera/@ThermoPhase/elementIndex.m: added support for cell arrays of element names 2004-07-30 14:26 dggoodwin * Cantera/matlab/cantera/@ThermoPhase/elementName.m: fixed bug 2004-07-30 00:31 dggoodwin * Cantera/src/: RateCoeffMgr.h, RxnRates.h, reaction_defs.h, oneD/boundaries1D.cpp, zeroD/ReactorNet.cpp: added ArrheniusSum class 2004-07-30 00:22 dggoodwin * Cantera/python/src/: ctreactor_methods.cpp, methods.h: removed time() methods for class Reactor and added them to class ReactorNet 2004-07-30 00:21 dggoodwin * Cantera/python/Cantera/Reactor.py: removed method Reactor.time(), and added ReactorNet.time() 2004-07-30 00:14 hkmoffa * test_problems/: Makefile.in, ck2cti_test/Makefile.in, cxx_ex/Makefile.in, cxx_ex/gri30.xml, diamondSurf/Makefile.in, silane_equil/.cvsignore, silane_equil/Makefile.in, silane_equil/silane_equil.cpp, surfkin/Makefile.in: Added depends target to makefiles 2004-07-29 23:43 hkmoffa * test_problems/diamondSurf/: .cvsignore, Makefile.in: Added a depends target 2004-07-29 01:44 hkmoffa * config/configure.in: Added support for ck2cti_test 2004-07-29 01:40 hkmoffa * test_problems/ck2cti_test/: .cvsignore, Makefile.in, gri30.inp, gri30_tran.dat, gri30a_blessed.cti, runtest.in: Adding another test to cover ck parser 2004-07-29 01:36 hkmoffa * test_problems/surfkin/: .cvsignore, Makefile.in: Added a depends capability 2004-07-27 01:12 dggoodwin * Cantera/python/src/methods.h: removed unused bndry functions 2004-07-26 17:58 hkmoffa * Cantera/src/: NasaThermo.h, ShomateThermo.h: Removed the at() function for vectors. gcc v2.95 does not support this function. 2004-07-21 22:41 hkmoffa * Cantera/src/: ThermoFactory.h, misc.cpp: Took the deletion of a static pointer out of destructor. 2004-07-17 02:18 hkmoffa * Cantera/src/: ConstDensityThermo.h, NasaPoly1.h, NasaThermo.h, PolyThermoMgr.h, ShomatePoly.h, ShomateThermo.h, SimpleThermo.h, SpeciesThermo.h, SpeciesThermoMgr.h, StoichSubstance.cpp, StoichSubstance.h, ThermoPhase.h: Added "getParameter" routines to most of the species and phase thermo objects. Fixed a bug in NasaThermo::update_one() and ShomateThermo::update_one() that occurred because m_low_map and m_high_map contained bad information. They were maps to fixed pointers, but the location of the objects that they referred to changed during vector resizing operations. 2004-07-12 16:58 hkmoffa * Cantera/clib/src/: ct.cpp, ctonedim.cpp: static_cast to eliminate warnings from msvc. 2004-07-12 16:57 hkmoffa * Cantera/clib/src/Storage.cpp: Static casts to eliminates warnings from msvc 2004-07-12 16:57 hkmoffa * Cantera/clib/src/Cabinet.h: Static_casts to eliminate warnings from msvc. 2004-07-08 22:32 hkmoffa * Cantera/src/StoichSubstance.cpp: Fixed an error that was making the diamond test problem fail. 2004-07-08 22:32 hkmoffa * test_problems/diamondSurf/diamond_blessed.xml: Updated file so test would pass 2004-07-08 22:14 hkmoffa * test_problems/silane_equil/output_blessed.txt: Updated blessed file. 2004-07-08 20:14 hkmoffa * Cantera/src/: InterfaceKinetics.cpp, InterfaceKinetics.h: Added more comments. -> only formatting. 2004-07-08 20:12 hkmoffa * Cantera/src/Group.cpp: only formatting. 2004-07-08 20:11 hkmoffa * Cantera/src/units.h: Fixed an error that I recently introduced in using size_types. 2004-07-08 20:10 hkmoffa * Cantera/src/ctml.cpp: Fixed errors that I recently introduced in using size_types. 2004-07-08 20:09 hkmoffa * Cantera/src/misc.cpp: Fixed an error that I recently introduced in using size_types 2004-07-08 20:07 hkmoffa * Cantera/src/stringUtils.cpp: Fixed an error that I recently introduced in using size_types. 2004-07-08 20:03 hkmoffa * Cantera/src/GasKinetics.h: Added more initializations 2004-07-08 18:08 hkmoffa * Cantera/src/misc.cpp: Fixed an error that I introduced. Must always check string::size_type against string::npos. 2004-07-02 19:34 hkmoffa * Cantera/src/converters/CKParser.cpp: Eliminated warnings due to signed and unsigned comparisons. 2004-07-02 19:28 hkmoffa * Cantera/src/converters/CKReader.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 19:27 hkmoffa * Cantera/src/converters/CKParser.cpp: static_casts to eliminate VC++ warnings. 2004-07-02 19:25 hkmoffa * Cantera/src/converters/ck2ct.cpp: fixed file names for include files. static_cast to eliminate VC++ warnigns. 2004-07-02 19:24 hkmoffa * Cantera/src/converters/ckr_utils.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 19:23 hkmoffa * Cantera/src/converters/ckr_defs.h: Corrected file locations for include files. 2004-07-02 19:21 hkmoffa * Cantera/src/converters/: writelog.cpp, filter.cpp, Reaction.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 19:20 hkmoffa * Cantera/src/converters/ck2ctml.cpp: Corrected file locations of include files. static_cast to eliminate VC++ warnings. 2004-07-02 19:19 hkmoffa * Cantera/src/converters/ck2ctml.h: Corrected file locations of include files. 2004-07-02 18:48 hkmoffa * Cantera/src/converters/: CKParser.cpp, CKParser.h: Moved CK_SyntaxError definition to the .h file. It's used in more than one .cpp file. 2004-07-02 18:47 hkmoffa * Cantera/src/converters/filter.cpp: split long lines. 2004-07-02 18:14 hkmoffa * Cantera/src/zeroD/FlowDevice.cpp: Corrected file location of include file. 2004-07-02 18:13 hkmoffa * Cantera/src/zeroD/ReactorBase.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 18:12 hkmoffa * Cantera/src/zeroD/Wall.cpp: Correct file location of include file. 2004-07-02 18:05 hkmoffa * Cantera/src/transport/TransportFactory.cpp: Corrected file locations of include files. static_cast to eliminate VC++ warnings. 2004-07-02 18:04 hkmoffa * Cantera/src/transport/MultiTransport.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 18:02 hkmoffa * Cantera/src/transport/MMCollisionInt.cpp: commented out a variable that wasn't used. 2004-07-02 18:01 hkmoffa * Cantera/src/transport/: L_matrix.h, MixTransport.cpp: Corrected the file location of include files. 2004-07-02 17:59 hkmoffa * Cantera/src/transport/: TransportParams.h, SolidTransport.cpp: Corrected the file locations of include files. 2004-07-02 17:29 hkmoffa * Cantera/src/oneD/MultiNewton.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 17:27 hkmoffa * Cantera/src/oneD/OneDim.cpp: Static_cast to eliminate VC++ warnings. 2004-07-02 17:26 hkmoffa * Cantera/src/oneD/: Sim1D.cpp, StFlow.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 17:23 hkmoffa * Cantera/src/oneD/refine.cpp: Static_cast to eliminate VC++ warnings. 2004-07-02 17:21 hkmoffa * Cantera/src/oneD/refine.h: static_cast to eliminate warning in VC++ 2004-07-02 17:20 hkmoffa * Cantera/src/oneD/Solid1D.cpp: Fixed one Error in file not part of the distribution 2004-07-02 17:19 hkmoffa * Cantera/src/oneD/Solid1D.h: Fixed one error in a file not yet part of distribution. 2004-07-02 16:58 hkmoffa * Cantera/src/DASPK.cpp: Fixed an error in a calling routine. Fixed an error involving passing a pointer through an integer array, when the length of the pointer is longer than the length of a single integer. Basically, you have to cast first to the longer variable, before assigning. 2004-07-02 16:48 hkmoffa * Cantera/src/SpeciesThermoFactory.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 16:47 hkmoffa * Cantera/src/misc.cpp: static_cast and size_type to eliminate VC++ warnings. 2004-07-02 16:46 hkmoffa * Cantera/src/importCTML.cpp: static_cast to eliminate VC++ warning messages. 2004-07-02 16:45 hkmoffa * Cantera/src/ImplicitSurfChem.cpp: static_cast to eliminate VC++ warning message. 2004-07-02 16:44 hkmoffa * Cantera/src/ImplicitChem.h: Changed the name of a routine, to get it to compile. However, I don't think this is part of the distribution. 2004-07-02 16:43 hkmoffa * Cantera/src/surfKinetics.h: changed the name of an include file. however, I think this is no longer part of the distribution. 2004-07-02 16:42 hkmoffa * Cantera/src/ReactionPath.cpp: static_cast to eliminate warning messages. 2004-07-02 16:41 hkmoffa * Cantera/src/ctml.cpp: static cast and size_type to eliminate VC++ warning messages. 2004-07-02 16:39 hkmoffa * Cantera/src/: stringUtils.cpp, ReactionPath.h: static_cast to eliminate VC++ warning messages. 2004-07-02 01:58 hkmoffa * Cantera/src/GasKinetics.cpp: static_cast to eliminate VC++ warnings. 2004-07-02 01:54 hkmoffa * Cantera/src/: ArrayViewer.h, Kinetics.h: static_cast to eliminate VC++ warnings. 2004-07-02 01:50 hkmoffa * Cantera/src/StoichManager.h: static_cast to eliminate VC++ warnings. 2004-07-02 01:47 hkmoffa * Cantera/src/: NasaThermo.h, ShomateThermo.h, RateCoeffMgr.h, ThirdBodyMgr.h: static_cast to eliminate VC++ warnings. 2004-07-02 01:46 hkmoffa * Cantera/src/plots.cpp: static_casts to eliminate VC++ warnings. 2004-07-02 01:46 hkmoffa * Cantera/src/units.h: small changes to eliminate VC++ warnings. 2004-07-02 01:40 hkmoffa * Cantera/src/DenseMatrix.cpp: static_cast to eliminate VC++ warnings 2004-07-02 01:35 hkmoffa * Cantera/src/: Group.cpp, Group.h: Fixed an error that turned up in VC++. I think the problem was that VC++ didn't allow friend functions to be defined in the body of declarations in .h files. 2004-07-02 01:26 hkmoffa * Cantera/src/Elements.cpp: static cast added to avoid VC++ compiler warning. 2004-07-02 01:25 hkmoffa * Cantera/src/Array.h: static_cast added to avoid VC++ compiler issues. 2004-07-02 01:22 hkmoffa * Cantera/src/xml.cpp: VC++ warnings were taken out 2004-07-02 01:12 hkmoffa * Cantera/src/xml.h: Added static_cast to remove VC++ compiler warning. 2004-07-01 00:30 hkmoffa * Cantera/src/ImplicitChem.cpp: Fixed an error with a calling statement. 2004-06-30 23:08 hkmoffa * Cantera/src/ResidEval.h: Fixed a compiler error that showed up VC++ 2004-06-29 01:51 hkmoffa * Cantera/src/Phase.h: Set m_xml to zero after deletion. 2004-06-29 01:49 hkmoffa * Cantera/src/importCTML.h: Added the installSpecies() declaration back in. This is needed for the particle species thermo object. It's in the cpp file, but just not declared here. 2004-06-29 01:47 hkmoffa * Cantera/src/SpeciesThermoFactory.cpp: Added a few throw statements that was missing. Added a throw UnknownSpeciesThermo statement for cases where the complete thermo block is missing. This is necessary for particle species object to function. 2004-06-17 19:49 dggoodwin * Cantera/src/PureFluidPhase.cpp: initial import 2004-06-16 23:55 dggoodwin * Cantera/src/GasKinetics.cpp: changed call to ReactionStoichMgr::add so that non-integral reaction orders are correctly processed. 2004-06-09 02:59 dggoodwin * Cantera/src/: ConstDensityThermo.cpp, ConstDensityThermo.h, Constituents.cpp, Constituents.h, EdgePhase.h, Elements.h, Makefile.in, PureFluidPhase.h, SpeciesThermoFactory.cpp, SpeciesThermoFactory.h, StoichSubstance.cpp, StoichSubstance.h, SurfPhase.cpp, SurfPhase.h, ThermoFactory.cpp, ThermoPhase.cpp, ThermoPhase.h, importCTML.cpp, importCTML.h, xml.cpp, xml.h, zeroD/Wall.h: moved functions to read XML input files out of importCTML.cpp and into specific classes 2004-06-07 00:02 dggoodwin * Cantera/src/Elements.cpp: moved reading of xml element data to Elements.cpp 2004-06-04 07:19 dggoodwin * Makefile.in, configure, Cantera/matlab/setup_winmatlab.py, Cantera/python/Cantera/DustyGasTransport.py, Cantera/python/Cantera/Func.py, Cantera/python/Cantera/Interface.py, Cantera/python/Cantera/Phase.py, Cantera/python/Cantera/Reactor.py, Cantera/python/Cantera/ThermoPhase.py, Cantera/python/Cantera/Transport.py, Cantera/python/Cantera/importFromFile.py, Cantera/python/src/ctreactor_methods.cpp, Cantera/src/ct2ctml.cpp, config/configure, config/configure.in, test_problems/cxx_ex/gri30.xml, test_problems/cxx_ex/silane.xml: added comments 2004-06-03 06:01 dggoodwin * Cantera/python/Cantera/importFromFile.py: added comments 2004-06-03 05:44 dggoodwin * Cantera/python/Cantera/Interface.py: added comments 2004-06-02 14:57 dggoodwin * Cantera/python/: Cantera/Func.py, Cantera/Phase.py, Cantera/ThermoPhase.py, examples/reactor1.py, examples/reactor2.py: minor cleanup 2004-06-02 06:39 dggoodwin * Cantera/python/: Makefile.in, ctml_writer.py, setup.py.in: moved ctml_writer.py out of Cantera package 2004-05-30 06:04 dggoodwin * Cantera/src/oneD/: Sim1D.cpp, refine.cpp: fixed problem with continuing beyond max number of points 2004-05-30 06:02 dggoodwin * Cantera/python/Cantera/ctml_writer.py: converted to pure python 2004-05-24 02:08 dggoodwin * Cantera/matlab/cantera/: @Reactor/private/reactormethods.cpp, @Transport/private/newTransport.cpp, @Transport/private/trans_methods.cpp, @Wall/private/wallmethods.cpp, @XML_Node/private/newxml.cpp, @XML_Node/private/xmlmethods.cpp: removed unused files 2004-05-24 02:05 dggoodwin * Cantera/matlab/cantera/@Kinetics/private/: delkinetics.cpp, isrev.cpp, kin_get.cpp, kin_set.cpp, newkinetics.cpp, production.cpp, pstoich.cpp, rop.cpp, rstoich.cpp, rxnstring.cpp: removed unused files 2004-05-22 05:52 dggoodwin * Cantera/python/tutorial/: tut2.py, tut3.py, tut4.py: updated tutorials 2004-05-21 20:09 dggoodwin * Cantera/src/transport/MMCollisionInt.cpp: fixed bug in which upper T* limit was incorrect in fits if T*max > 100, as with helium. 2004-05-18 01:22 dggoodwin * config/configure.in: added test for sstream 2004-05-18 00:59 dggoodwin * Cantera/matlab/cantera/@ReactorNet/: addReactor.m, atol.m, rtol.m, setInitialTime.m, setMaxTimeStep.m, setTolerances.m, time.m: initial import 2004-05-17 18:23 dggoodwin * test_problems/cxx_ex/: kin1_blessed.csv, kin2_blessed.csv: reverted to previus version due to error in last versions 2004-05-16 15:54 dggoodwin * Cantera/src/: CVode.cpp, CVode.h, Integrator.h: changed setMaxStep to setMaxStepSize, setMinStep to setMinStepSize, and added setMaxSteps to set the maximum number of steps that will be taken. 2004-05-15 05:19 dggoodwin * Cantera/python/examples/critProperties.py: added example of computing critical-state properties 2004-05-14 23:15 dggoodwin * Cantera/src/transport/: MultiTransport.h, MultiTransport.cpp: added ability to compute mixture-averaged diffusion coefficients in class MultiTransport. 2004-05-13 19:52 dggoodwin * ChangeLog: log file generated from CVS log output by perl script cvs2cl.pl 2004-05-13 19:45 dggoodwin * Cantera/src/converters/CKParser.cpp: fixed bug in which a species name beginning with M was interpreted as a third body 2004-04-24 17:44 dggoodwin * configure, Cantera/matlab/setup_winmatlab.py, Cantera/python/Cantera/Func.py, Cantera/python/Cantera/Reactor.py, Cantera/python/examples/catcomb.py, Cantera/python/examples/diamond.py, Cantera/python/examples/dustygas.py, Cantera/python/examples/flame1.py, Cantera/python/examples/isentropic.py, Cantera/python/examples/mix1.py, Cantera/python/examples/mix2.py, Cantera/python/examples/reactor1.py, Cantera/python/examples/reactor2.py, data/inputs/diamond.cti: updated examples 2004-04-24 14:55 dggoodwin * Cantera/matlab/cantera/: @ReactorNet/ReactorNet.m, @ReactorNet/advance.m, @ReactorNet/reactornet_hndl.m, @ReactorNet/step.m, @ReactorNet/private/reactornetmethods.m, private/reactornetmethods.cpp: initial import 2004-04-24 14:50 dggoodwin * test_problems/: cxx_ex/kin1_blessed.csv, cxx_ex/kin2_blessed.csv, silane_equil/output_blessed.txt: updated blessed files due to slight change in how Nasa polynomial thermo properties computed 2004-04-23 23:02 hkmoffa * Cantera/src/surfKinetics.cpp: Call to the baseclass init() function from init() 2004-04-23 22:37 hkmoffa * Cantera/src/GasKinetics.cpp: Cosmetic -> changed args to fall after ( 2004-04-23 22:36 hkmoffa * Cantera/src/PureFluidPhase.h: Added a header. 2004-04-23 21:55 hkmoffa * Cantera/src/: importCTML.cpp, importCTML.h: Made checkRxnElementBalance global scoped, so that it could be used in cads package. 2004-04-23 21:05 hkmoffa * Cantera/src/importCTML.cpp: Strictly formatting- broke up long lines added a few comments. 2004-04-23 21:03 hkmoffa * Cantera/src/importCTML.h: Added prototypes for 2 functions. 2004-04-23 19:35 hkmoffa * Cantera/fortran/src/Makefile.in: Changed libfct.a.a to libfct.a 2004-04-23 19:17 hkmoffa * Cantera/fortran/f77demos/.cvsignore: Added 2 generated files. 2004-04-23 19:13 hkmoffa * Cantera/fortran/src/fct.cpp: Changed a getMassFractions() call from 2 args to 1 arg. The old method had been taken out of State.h. And, this file had not been subsequently updated. 2004-04-23 18:42 hkmoffa * Cantera/matlab/.cvsignore: Added setup_matlab.py, this is a generated file. 2004-04-23 18:41 hkmoffa * Cantera/src/.cvsignore: Added config.h 2004-04-23 18:34 dggoodwin * Cantera/src/importCTML.cpp: added function checkRxnElementBalance, and modified importReaction to call it before adding a reaction to check that it is balanced. 2004-04-23 00:59 hkmoffa * config/: configure, configure.in: Added python_prefix capability. Can now install site-packages into a different directory than the Cantera install directory. Added a particles section that shouldn't be turned on. 2004-04-23 00:54 hkmoffa * .cvsignore: Added a file. 2004-04-23 00:43 hkmoffa * Makefile.in: Making sure that build_particles=0 turns off going to cads directory 2004-04-23 00:42 hkmoffa * configure: Added a python_prefix capability that allows one to put python site packages in a different spot than cantera installation files. 2004-04-22 23:50 hkmoffa * tools/src/.cvsignore: Added 2 files. 2004-04-22 23:33 hkmoffa * Cantera/python/Makefile.in: Part of separating python prefix from prefix. 2004-04-22 23:28 hkmoffa * Makefile.in: Added installs for a few more files from demo directory. -> including Makefile.install -> Makefile 2004-04-22 23:14 hkmoffa * Cantera/cxx/: Makefile.in, demos/Makefile.in, demos/Makefile.install: Ok, think I fixed it. Added a demo results and added Makefile back into repository so that demo problems run correctly in both directories (and give the same result). 2004-04-22 21:49 hkmoffa * Cantera/cxx/demos/Makefile.in: Fixed an error in the clean rule. 2004-04-22 21:46 hkmoffa * config/configure.in: Fixed a typo. 2004-04-22 21:44 hkmoffa * config/: configure, configure.in: Added 2 directories to the list of Makefiles to be created. 2004-04-22 21:42 hkmoffa * Cantera/cxx/: Makefile.in, demos/.cvsignore, demos/Makefile, demos/Makefile.in, demos/kin1_blessed.csv, demos/kin1_blessed.dat, src/.cvsignore, src/Makefile.in, src/cxxutils.cpp, src/writelog.cpp: Added a small demo. Added comments. 2004-04-22 21:06 hkmoffa * Cantera/matlab/cantera/.cvsignore: Added ctbin.m 2004-03-18 14:26 dggoodwin * Cantera/matlab/cantera/@ThermoPhase/: setState_Psat.m, setState_Tsat.m: initial import 2004-03-13 04:25 dggoodwin * Cantera/src/Phase.cpp: bug fixedin setMassFractionsByName 2004-02-23 06:47 dggoodwin * Cantera/matlab/cantera/@Func/: char.m, display.m, plus.m, rdivide.m, subsref.m, times.m, private/funcmethods.m: initial import 2004-02-03 04:33 dggoodwin * Cantera/src/: EdgePhase.h, EdgeKinetics.cpp, EdgeKinetics.h: initial import 2004-01-31 00:14 hkmoffa * Cantera/clib/src/Makefile.in: Added an all: rule. The end effect is that the library isn't archived when there isn't any need to. 2004-01-30 19:27 hkmoffa * configure: Small change to all presetting end libs. 2004-01-14 17:30 hkmoffa * test_problems/cxx_ex/: gri30.xml, kin1_blessed.csv, kin2_blessed.csv: Changed the blessed files. There was a small change in the actual answer. 2004-01-14 17:03 hkmoffa * test_problems/surfkin/surface.xml: Changed the xml file to have the same element ordering as the gri file's elements. 2004-01-14 17:00 hkmoffa * test_problems/diamondSurf/: diamond.cti, diamond_blessed.xml, tdia_a.py: changed the cti file so that the elements of all phases were ordered the same. 2004-01-11 13:57 dggoodwin * Cantera/cxx/demos/: Makefile, kinetics1.cpp: initial import 2004-01-05 18:01 dggoodwin * Cantera/cxx/demos/: example_utils.h, kinetics1.cpp: initial import 2004-01-04 15:40 dggoodwin * Cantera/src/: config.h, ct2ctml.cpp: changed check.py to .check.py 2004-01-02 02:02 dggoodwin * test_problems/: cxx_ex/Makefile.in, cxx_ex/runtest, diamondSurf/runtest, silane_equil/runtest, surfkin/runtest: added definition of CANTERA_DATA 2004-01-02 00:41 dggoodwin * Cantera/cxx/src/Makefile.in: initial import 2004-01-02 00:39 dggoodwin * Makefile.in, config/configure, config/configure.in: cleanup 2004-01-02 00:26 dggoodwin * include/: Cantera.h, GRI30.h, IdealGasMix.h, Interface.h, README, ctml.h, equilibrium.h, integrators.h, kinetics.h, numerics.h, onedim.h, reactionpaths.h, surface.h, transport.h, zerodim.h: files moved to Cantera/cxx/include 2004-01-02 00:13 dggoodwin * Cantera/cxx/: cxxutils.cpp, writelog.cpp, src/cxxutils.cpp, src/writelog.cpp: innitial import 2004-01-02 00:11 dggoodwin * Cantera/: README.txt, cxx/include/Cantera.h, cxx/include/GRI30.h, cxx/include/IdealGasMix.h, cxx/include/Interface.h, cxx/include/equilibrium.h, cxx/include/integrators.h, cxx/include/kinetics.h, cxx/include/numerics.h, cxx/include/onedim.h, cxx/include/reactionpaths.h, cxx/include/surface.h, cxx/include/transport.h, cxx/include/zerodim.h, src/Makefile.in, src/ct2ctml.cpp: initial import 2004-01-01 20:56 dggoodwin * configure, Cantera/src/MMCollisionInt.cpp, Cantera/src/Makefile.in, Cantera/src/MixTransport.cpp, Cantera/src/Newton.h, Cantera/src/PropertyUpdater.h, Cantera/src/misc.cpp, include/Cantera.h, include/README, include/config.h, include/ftn_defs.h: cleanup 2003-12-31 09:38 dggoodwin * Makefile.in: - 2003-12-31 09:31 dggoodwin * Makefile.in: - 2003-12-31 09:27 dggoodwin * tools/Makefile.in: added build_ck 2003-12-31 09:14 dggoodwin * Cantera/src/ct2ctml.cpp: removed #include pypath.h 2003-12-31 09:04 dggoodwin * Makefile.in: - 2003-12-22 15:41 dggoodwin * config/: configure, configure.in, testpch.h: initial import 2003-12-22 15:30 dggoodwin * Makefile.in, config.h, Cantera/clib/src/ct.h, Cantera/clib/src/ctonedim.cpp, Cantera/matlab/setup_matlab.py, Cantera/matlab/cantera/buildwin.m, Cantera/matlab/cantera/private/transportmethods.cpp, Cantera/src/BandMatrix.cpp, Cantera/src/DenseMatrix.cpp, Cantera/src/config.h, Cantera/src/oneD/boundaries1D.cpp, config/configure, config/configure.in: updated Windows build procedure 2003-12-20 19:03 hkmoffa * Cantera/src/transport/MixTransport.cpp: Fix to getDiffusion in order to avoid a NAN result for m_nsp = 1 case and for mixtures with X_i=1.0. 2003-12-20 18:53 hkmoffa * tools/testtools/csvdiff.cpp: Fixed 2 things: stripped column names checked for zero title lines 2003-12-20 13:12 dggoodwin * Cantera/src/ChemEquil.cpp, examples/cxx/equil_example1.cpp, test_problems/cxx_ex/eq1_blessed.csv, test_problems/cxx_ex/eq1_blessed.dat: changed problem parameters to keep T in range 2003-12-20 13:06 dggoodwin * test_problems/cxx_ex/eq1_blessed.csv, test_problems/cxx_ex/eq1_blessed.dat, test_problems/silane_equil/output_blessed.txt, test_problems/silane_equil/silane_equil.cpp, examples/cxx/equil_example1.cpp: changed problem parameters to keep T in range 2003-12-20 12:43 dggoodwin * tools/templates/cxx/demo.cpp: changed example parameters 2003-12-20 12:39 dggoodwin * tools/templates/cxx/demo.cpp: changed example parameters 2003-12-20 12:35 dggoodwin * Makefile.in, Cantera/src/ChemEquil.cpp: minor cleanup 2003-12-20 06:09 dggoodwin * config.h, Cantera/matlab/setup_matlab.py, Cantera/src/config.h, tools/Makefile.in, tools/src/finish_install.py.in, tools/templates/cxx/demo.cpp: - 2003-12-20 06:08 dggoodwin * Cantera/src/ChemEquil.cpp: fixed temperature limits 2003-12-15 09:54 dggoodwin * config.h, Cantera/matlab/setup_matlab.py, Cantera/src/Makefile.in, Cantera/src/config.h, tools/bin/finish_install.py: - 2003-12-13 23:58 dggoodwin * Cantera/src/misc.cpp: - 2003-12-13 15:35 dggoodwin * INSTALLING, Makefile.in, Cantera/clib/src/ct.cpp, Cantera/matlab/setup_matlab.py, Cantera/matlab/setup_matlab.py.in, Cantera/matlab/cantera/@Solution/set.m, Cantera/python/setup.py.in, Cantera/src/BandMatrix.cpp, Cantera/src/Makefile.in, Cantera/src/SurfPhase.h, Cantera/src/importCTML.cpp, Cantera/src/importCTML.h, Cantera/src/utilities.h, config/configure, config/configure.in, data/inputs/Makefile.in, data/inputs/gri30.xml, ext/tpx/Hydrogen.cpp, ext/tpx/Oxygen.cpp, tools/bin/finish_install.py: cleanup 2003-12-13 15:08 dggoodwin * test_problems/cxx_ex/: gri30.xml, kin1_blessed.csv, kin2_blessed.csv, tr2_blessed.csv: rebaselined 2003-12-12 18:03 dggoodwin * Cantera/matlab/setup_matlab.py.in: - 2003-12-12 17:51 dggoodwin * Cantera/matlab/cantera/private/: reactormethods.cpp, flowdevicemethods.cpp, wallmethods.cpp: - 2003-12-12 17:46 dggoodwin * config/configure, config/configure.in, Cantera/matlab/setup_matlab.py.in: - 2003-12-12 17:44 dggoodwin * Cantera/matlab/setup_matlab.py.in: initial import 2003-12-12 17:28 dggoodwin * config/: configure, configure.in: - 2003-12-12 17:18 dggoodwin * Cantera/: matlab/Makefile.in, python/setup.py.in, python/Makefile.in: removed libconverters dependency 2003-12-12 17:15 dggoodwin * Cantera/clib/src/Makefile.in: removed libconverters dependency 2003-12-12 17:11 dggoodwin * INSTALLING, License.txt, config.h, config.h.in, configure, Cantera/src/Makefile.in, Cantera/src/config.h, Cantera/src/misc.cpp, config/configure, config/configure.in, tools/src/Makefile.in: isolated Chemkin file support to building ck2cti 2003-12-11 14:01 dggoodwin * Cantera/python/: Cantera/rxnpath.py, src/ctrpath_methods.cpp, src/methods.h: set font in reaction path diagrams 2003-12-11 13:15 dggoodwin * tools/src/package4mac.in: initial import 2003-12-11 13:06 dggoodwin * Cantera/src/transport/: DustyGasTransport.cpp, DustyGasTransport.h, MixTransport.cpp, MultiTransport.cpp, SolidTransport.cpp, TransportBase.h, TransportFactory.cpp: minor cleanup 2003-12-05 18:13 dggoodwin * Cantera/src/: PureFluidPhase.h, ThermoPhase.cpp, ThermoPhase.h, transport/DustyGasTransport.cpp, transport/DustyGasTransport.h: - 2003-11-24 17:39 dggoodwin * configure, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/python/setup.py.in, Cantera/python/Cantera/ThermoPhase.py, Cantera/python/Cantera/ctml_writer.py, Cantera/python/src/ctthermo_methods.cpp, Cantera/src/State.h, Cantera/src/ThermoFactory.cpp, Cantera/src/ThermoPhase.h, Cantera/src/ctml.cpp, Cantera/src/ctml.h, Cantera/src/importCTML.cpp, Cantera/src/mix_defs.h, Cantera/src/xml.cpp, Cantera/src/oneD/StFlow.cpp, Cantera/src/transport/DustyGasTransport.cpp, ext/tpx/utils.cpp: - 2003-11-19 11:50 dggoodwin * Makefile.in, config/configure, config/configure.in, tools/templates/cxx/demo.cpp, tools/templates/cxx/demo.mak.in, tools/templates/f77/demo.f, tools/templates/f77/demo.mak.in, tools/templates/f77/demo_ftnlib.cpp: - 2003-11-19 10:37 dggoodwin * Makefile.in, config.h, Cantera/src/config.h, config/configure, config/configure.in, tools/Makefile.in, tools/bin/finish_install.py, tools/man/mixmaster.1, tools/src/finish_install.py.in, tools/templates/f77/demo.mak.in: - 2003-11-17 16:19 dggoodwin * config/configure, config/configure.in, config.h, Cantera/src/config.h, tools/Makefile.in, tools/bin/finish_install.py, tools/doc/Cantera.cfg: - 2003-11-17 15:10 dggoodwin * Makefile.in, README.txt, config.h.in, configure: - 2003-11-17 14:52 dggoodwin * tools/: src/ck2cti.cpp, src/finish_install.py.in, man/mixmaster.1: initial import 2003-11-17 14:51 dggoodwin * Cantera/: matlab/Makefile.in, python/Cantera/Transport.py, python/examples/flame2.py, src/oneD/StFlow.cpp, src/oneD/StFlow.h: cleanup 2003-11-16 18:14 dggoodwin * tools/man/ck2cti.1: initial import 2003-11-13 12:54 dggoodwin * Cantera/src/oneD/MultiJac.cpp: removed NaN test 2003-11-12 19:56 dggoodwin * Cantera/src/oneD/StFlow.cpp: multicomponent transport working 2003-11-01 11:11 dggoodwin * Cantera/user/: Makefile.in, user.cpp: initial import 2003-11-01 05:48 dggoodwin * Cantera/python/Cantera/ctml_writer.py: added capability to have species names with embedded commas 2003-10-24 12:11 dggoodwin * tools/doc/html/banner4.jpg: initial import 2003-10-22 02:33 dggoodwin * Cantera/src/: State.h, State.cpp: minor cleanup 2003-10-15 18:21 hkmoffa * Cantera/src/misc.cpp: Added a call to delete the static instance of a Falloff factory 2003-10-15 18:20 hkmoffa * Cantera/src/transport/: TransportFactory.cpp, TransportFactory.h: Fixed a bug in the destructor, wherein an infinite loop condition may occur. 2003-10-14 14:58 dggoodwin * Cantera/python/Cantera/DustyGasTransport.py: initial import 2003-09-25 22:37 dggoodwin * Cantera/src/transport/: DustyGasTransport.cpp, DustyGasTransport.h, Makefile.in, TransportBase.h, TransportFactory.cpp: added DustyGasTransport 2003-09-16 17:58 hkmoffa * Cantera/src/ctml.cpp: Fixed a rather hideous error in getMap(), that was causing element compositions to be read incorrectly when the species is made up of a large numbers of a single element. 2003-09-08 15:33 dggoodwin * Cantera/fortran/f77demos/: README.txt, ctlib.f, f77demos.mak.in, isentropic.f: initial import 2003-09-06 08:04 dggoodwin * tools/templates/f77/: README_WIN32.txt, f77demo.dsp: initial import 2003-09-05 18:57 hkmoffa * test_problems/diamondSurf/runDiamond.cpp: loosened the tolerances on nil printing 2003-09-05 18:42 hkmoffa * Cantera/src/transport/: MixTransport.cpp, MixTransport.h, MultiTransport.cpp: Fixed several UMR's discovered while using valgrind. 2003-09-05 18:20 hkmoffa * test_problems/diamondSurf/: Makefile.in, runDiamond.cpp, runDiamond_blessed.out: Fixed the Makefile.in, undated runDiamond to print out more nulls, and changed the solution back. I had an error in my Cantera version that created an undocumented changed in the result. 2003-09-05 16:45 hkmoffa * data/transport/misc_tran.dat: Added a III-V database 2003-09-05 01:42 dggoodwin * Cantera/python/Cantera/OneD/: __init__.py, flame.py, onedim.py: initial import 2003-09-03 22:00 hkmoffa * test_problems/diamondSurf/: runDiamond.cpp, runDiamond_blessed.out: Rebaselined due to change in units 2003-09-03 21:59 hkmoffa * Cantera/src/: FalloffFactory.h, FalloffMgr.h: Fixed an error that I had introduced. 2003-09-03 21:59 hkmoffa * test_problems/cxx_ex/: kin1_blessed.csv, kin2_blessed.csv: rebaselined due to change in constants. 2003-09-03 20:49 hkmoffa * Cantera/src/converters/Makefile.in: Might as well keep this in till it breaks. 2003-09-03 20:48 hkmoffa * Cantera/src/converters/: ck2ctml.cpp, ck2ctml.h: Added const to the aguement lists. 2003-09-03 20:45 hkmoffa * Cantera/src/: global.h, misc.cpp: Added a function called appdelete(), which deletes all global data malloced by Cantera. With this call added to applications, Cantera passes the leak check from the valgrind application. (Well there is some squirrely behavior associated with either valgrind, linux, or the stl implementation, but it's not Cantera's fault). I also changed get_XML_File to store the absolute pathname in the map, so that the same XML tree isn't deleted twice. Lookups are always done wrt absolute pathnames. 2003-09-03 20:39 hkmoffa * Cantera/src/: importCTML.cpp, importCTML.h: Added the function get_XML_NameID, which does a search on the xml element name and id attribute. Made importSpecies() a global function. I needed this in order to read in enhancements to the XML data file for the PartSpecPhase class. 2003-09-03 20:33 hkmoffa * Cantera/src/: InterfaceKinetics.cpp, InterfaceKinetics.h: Added comments and changed the order of functions to place like functions in blocks. 2003-09-03 20:31 hkmoffa * Cantera/src/ThermoPhase.h: Cleanup of comment sections. 2003-09-03 20:31 hkmoffa * Cantera/src/State.cpp: cleanup 2003-09-03 20:29 hkmoffa * Cantera/src/: SpeciesThermo.h, SpeciesThermoFactory.cpp, SpeciesThermoFactory.h: Two main changes: The routines will now throw a named error condition when it can't match the species thermo or it can't find the species thermo. This is used in PartSpecPhase.cpp to signal that the thermo functions should be created on the fly from the bulk phase thermo and the bulk species basis for the particle species. The second one is to eliminate a potential fatal error of calling a delete for an object in the object's own destructor function. 2003-09-03 20:22 hkmoffa * Cantera/src/: xml.cpp, xml.h: Added the function findNameID, which does a tree lookup on the name and the id. Took out m_level, which seemed to have no purpose. 2003-09-03 20:19 hkmoffa * Cantera/src/Phase.h: Added comments. 2003-09-03 20:18 hkmoffa * Cantera/src/.cvsignore: Added a file. 2003-09-03 20:17 hkmoffa * Cantera/src/units.h: fixed a potentially fatal error of doing a delete in a destructor on the object containing the destructor. 2003-09-03 20:15 hkmoffa * Cantera/src/: Constituents.cpp, Constituents.h: Added a vector get for the atoms in a species. 2003-09-03 17:35 hkmoffa * Cantera/src/: FalloffFactory.h, FalloffMgr.h: Fixed an error with the destructors. valgrind showed that destructor wasn't being called for single instance of FalloffFactory. 2003-08-29 16:59 dggoodwin * Cantera/clib/src/genpy.py: initial import 2003-08-25 21:50 dggoodwin * Cantera/matlab/cantera/examples/catcomb.m: initial import 2003-08-25 20:29 hkmoffa * Cantera/src/SurfPhase.h: Added a dummy routine to set and store the pressure. It doesn't have an effect on anything. However, it doesn't cause a cantera error. 2003-08-23 19:14 dggoodwin * data/inputs/nasa.cti: initial import 2003-08-22 00:39 hkmoffa * Cantera/src/IncompressibleThermo.h: Changed fmax to fmaxx. 2003-08-22 00:38 hkmoffa * Cantera/src/RateCoeffMgr.h: Added the writeUpdate() function. It was needed to resolve externals. 2003-08-22 00:37 hkmoffa * Cantera/src/MultiDomain.h: changed fmax to fmaxx 2003-08-22 00:36 hkmoffa * Cantera/src/RxnRates.h: Changed fmax() to fmaxx() in one call. 2003-08-22 00:35 hkmoffa * Cantera/src/importCTML.cpp: Added more comments. 2003-08-22 00:34 hkmoffa * Cantera/src/ct2ctml.cpp: Commented out a spurious write operation 2003-08-22 00:33 hkmoffa * Cantera/src/ctml.h: Added a name of an argument. 2003-08-22 00:32 hkmoffa * Cantera/src/misc.cpp: Added a comment 2003-08-22 00:32 hkmoffa * Cantera/src/: xml.cpp, xml.h: Changed findXMLPhase() to return a non const XML tree. It broke the runDiamond program the other way, because importPhase() uses a non const XML tree argument. Also, the change commits a small alteration in the xml write operation that allows for the top level of an xml file to contain multiple elements. previously this was not possible. 2003-08-22 00:28 hkmoffa * Cantera/src/zeroD/Reactor.cpp: Fixed a UMR in the file. 2003-08-22 00:26 hkmoffa * examples/cxx/: equil_example1.cpp, kinetics_example1.cpp, rxnpath_example1.cpp, transport_example1.cpp, transport_example2.cpp: The find_xml interface has been deprecated. Therefore, there were changes needed in these files. 2003-08-22 00:25 hkmoffa * test_problems/: Makefile.in, silane_equil/output_blessed.txt, silane_equil/silane_equil.cpp, surfkin/Interface.h, surfkin/Makefile.in, surfkin/output_blessed.txt, surfkin/surfdemo.cpp: Rebaselined the problem. The solution changed in the 4th sig digit, because, I think, the physical constants changed in ct_defs.h 2003-08-22 00:23 hkmoffa * test_problems/diamondSurf/: runDiamond.cpp, runDiamond_blessed.out: Rebaselined test, because the answer changed in the 4th digit. I think it is due to the change in physical constants in ct_defs.h 2003-08-21 19:48 hkmoffa * Cantera/Makefile.in: changed fortran to fortran/src. Added particle hooks which should all be turned off by default. 2003-08-21 19:39 hkmoffa * Cantera/fortran/src/: .cvsignore, fct.cpp: find_XML is no longer in the Cantera kernel API. this fixes the problem, replacing it with calls to get_XML_Node(). 2003-08-21 17:35 hkmoffa * test_problems/diamondSurf/: diamond.cti, diamond_blessed.xml, runDiamond_blessed.out: Rebaselined after adding in a reaction 2003-08-21 16:27 dggoodwin * Cantera/src/zeroD/Wall.cpp: add support for surface chem 2003-08-21 16:26 dggoodwin * Cantera/src/zeroD/Wall.h: added support for surface chemistry on each side of the wall 2003-08-21 16:26 dggoodwin * Cantera/src/zeroD/Reactor.h: added surface chemistry 2003-08-21 16:25 dggoodwin * Cantera/src/zeroD/Reactor.cpp: added support for surface chemistry. 2003-08-21 04:40 dggoodwin * Cantera/src/ct2ctml.cpp: fixed get_CTML_Tree 2003-08-20 23:34 hkmoffa * Cantera/src/misc.cpp: Added header lines to the file 2003-08-20 22:23 hkmoffa * Cantera/src/xml.h: Added a CVS version comment block 2003-08-20 22:00 hkmoffa * config/configure.in: Added another test directory 2003-08-20 21:36 hkmoffa * test_problems/diamondSurf/: .cvsignore, Makefile.in, diamond.cti, diamond_blessed.xml, runDiamond.cpp, runDiamond_blessed.out, run_diamond.py, runtest: Added a new test problem 2003-08-20 17:30 dggoodwin * Cantera/src/oneD/StFlow.h: added some 'const's 2003-08-20 17:28 dggoodwin * Cantera/src/global.h: added two new functions. 2003-08-20 17:27 dggoodwin * Cantera/src/: ctml.h, oneD/Sim1D.cpp, oneD/StFlow.cpp: added some 'const's 2003-08-20 17:27 dggoodwin * Cantera/src/ct_defs.h: changed gas constant to 1999 CODATA value, removed option to not use kmol. 2003-08-20 17:26 dggoodwin * Cantera/src/ct2ctml.cpp: get_CTML_Tree is now deprecated. Use get_XML_File in misc.cpp. 2003-08-20 17:23 dggoodwin * Cantera/src/: SpeciesThermoFactory.cpp, ThermoPhase.h: added some 'const's 2003-08-20 17:19 dggoodwin * Cantera/src/misc.cpp: added option to clear all entries in close_XML_File. 2003-08-20 17:18 dggoodwin * Cantera/python/Cantera/Transport.py: stopped storing ThermoPhase object, since this is self-referential in classes like Solution that derive from Transport and ThermoPhase. 2003-08-20 17:16 dggoodwin * Cantera/python/Cantera/Kinetics.py: stopped storing ThermoPhase objects, since this is self-referential if a class derives from both Kinetics and ThermoPhase, causing it to never be deleted. 2003-08-20 17:15 dggoodwin * Cantera/python/Cantera/solution.py: changed call to XML_Node constructor 2003-08-20 17:13 dggoodwin * Cantera/python/Cantera/XML.py: removed self.root, which was self-referencing. 'build' replaced by 'get_XML_File' in constructor. 2003-08-20 17:03 hkmoffa * Cantera/src/importCTML.cpp: More comments added 2003-08-20 00:02 hkmoffa * Cantera/python/Cantera/ctml_writer.py: Fixed an error in an argument list 2003-08-19 19:28 hkmoffa * tools/src/: Makefile.in, ck2cti.cpp, ck2ctml.cpp, cti2ctml.cpp: Added some conversion programs. 2003-08-19 16:57 hkmoffa * Cantera/src/SurfPhase.h: Added more comments 2003-08-18 07:05 dggoodwin * Cantera/python/Cantera/ctml_writer.py: added support for specified reaction order, sticking coefficients, coverage dependence of rate coefficients; fixed error where site_density was not being converted to SI. 2003-08-17 21:14 dggoodwin * Cantera/src/RateCoeffMgr.h: added comments 2003-08-17 20:56 dggoodwin * Cantera/src/importCTML.cpp: Added support for coverage-dependent reaction rates and sticking coefficients, and reactions with specified reaction order. 2003-08-17 14:47 dggoodwin * Cantera/src/Kinetics.h: cleaned up and added more comments 2003-08-16 22:17 dggoodwin * Cantera/python/Cantera/ctml_writer.py: changed handling of reaction pre-exponential units to write converted value to CTML, rather than pass original value with a units string 2003-08-14 18:06 hkmoffa * Cantera/src/Kinetics.h: Organized the functions to list better under doxygen. Added more comments. Didn't change any of the actual code. 2003-08-13 17:24 hkmoffa * Cantera/src/xml.cpp: Fixed an error with build(). Basically it was having trouble with the tag "--". I think that tag is illegal anyway. 2003-08-13 02:55 hkmoffa * Cantera/src/xml.cpp: Fixed two errors in reading an xml file. 1) empty child xml elements had an extra / character being added onto the end of their name 2) comments with beginning and ending white space were being copied with an extra space added on to the front and end of the string. 2003-08-11 19:08 hkmoffa * Cantera/src/State.h: Added comments. 2003-08-11 18:13 hkmoffa * Cantera/src/Kinetics.h: Added more comments. 2003-08-08 21:58 hkmoffa * Cantera/src/InterfaceKinetics.cpp: Added more comment.s 2003-08-07 23:49 hkmoffa * test_problems/surfkin/surface.xml: Updated the xml data file 2003-08-07 23:42 hkmoffa * Cantera/src/Makefile.in: Added a make hdr-collect line. This is needed because the .h files in the build directory should be kept up to date with the .a files in the build directory. Thus, you need to update. Obviously, a more refined approach could be envisioned where only out of date .h files are copied. 2003-08-07 17:59 hkmoffa * Cantera/src/importCTML.cpp: Added a lot of comments to the routine. 2003-08-07 02:23 hkmoffa * test_problems/Makefile.in: Added the Makefile.in input file 2003-08-07 02:22 hkmoffa * test_problems/cxx_ex/: kin1_blessed.csv, tr1_blessed.csv, tr2_blessed.csv: Rebaselined these three tests. The results had changed in the 3rd significant digit. The changes, according to Goodwin, were most likely due to the change in the method of inclusion of the activation energies. Basically, a non standard kcal/mole conversion method was used to convert activation energies to temperatures internally. 2003-08-07 02:16 hkmoffa * Cantera/src/ct2ctml.cpp: Fixed an error in get_CTML_Tree() where the program wouldn't use the path where the file was found, but would assume the file was located in the current directory. This caused an empty ifstream to be send to build(), which then created an infinite loop (probably another error in build() that needs to be fixed). 2003-08-07 01:16 hkmoffa * Cantera/src/converters/Makefile.in: Broke a long line in two 2003-08-07 00:43 hkmoffa * config/: configure, configure.in: Added the surfkin directory 2003-08-06 20:30 hkmoffa * test_problems/cxx_ex/: gri30.xml, silane.xml: Updated xml files 2003-08-06 20:15 hkmoffa * include/: GRI30.h, IdealGasMix.h: Fixed GRI30.h. The id was wrong and caused a test problem to fail. 2003-08-06 20:13 hkmoffa * examples/cxx/.cvsignore: Added to cvsignore list 2003-08-06 19:32 hkmoffa * test_problems/surfkin/: .cvsignore, Interface.h, Makefile.in, output_blessed.txt, runtest, surface.xml, surfdemo.cpp: Added a simple test that calculate a rate of production for a surface mechanism 2003-08-06 19:14 hkmoffa * Cantera/src/ctml.cpp: Added a get_CTML_Tree() function. It was missing though there was an entry in ctml.h and IdealGasMix.h used it. 2003-08-06 19:10 hkmoffa * test_problems/silane_equil/silane.xml: updated xml file. test passes. 2003-08-05 01:15 hkmoffa * Cantera/src/: GasKinetics.cpp, GasKinetics.h: Added a bunch of new routines to return delta thermo values and reaction rate constants. 2003-08-05 01:10 hkmoffa * Cantera/src/converters/: ck2ct.cpp, ck2ctml.cpp: Fixed up a couple of issues with the stringstream block. That block works for reading transport databases with comments in them. The other block seems to get hung up. 2003-08-04 16:27 hkmoffa * tools/src/Makefile.in: Added a dependency to library files 2003-08-02 02:37 hkmoffa * Cantera/src/RateCoeffMgr.h: added a comment. 2003-08-02 02:36 hkmoffa * Cantera/src/: ThermoFactory.cpp, ThermoFactory.h: Added a specific named error condition for when the thermo factory can't find a match against a known ThermoPhase derivative class. This can be (and is in cttables) used to catch thrown errors, so that the kernel can be made extensible wrt other ThermoPhase derivative classes it may not know about. 2003-08-02 02:34 hkmoffa * Cantera/src/: KineticsFactory.cpp, KineticsFactory.h: Added a specific named error for not matching against a kinetics model. This can be (and is in cttables) used to catch a thrown error condition to make the kernel extensible wrt new kinetics managers. 2003-08-02 02:29 hkmoffa * Cantera/src/InterfaceKinetics.cpp: Added a few comments 2003-08-02 02:28 hkmoffa * Cantera/src/InterfaceKinetics.h: Added a comment block 2003-08-02 02:27 hkmoffa * Cantera/src/Kinetics.h: Organized the routines into sections. Added a bunch of routines that report the change in thermo quantities due to reactions. 2003-08-02 02:25 hkmoffa * Cantera/src/xml.cpp: Took out print statements in debug blocks 2003-08-02 02:24 hkmoffa * Cantera/src/: ThermoPhase.cpp, ThermoPhase.h: Added a function getUnitsStandardConc() that will report in a vector form what the units are (in MKS) for the standard and generalized concentrations. This is used to find what the units are for reaction rate constants and is used by cttables to actually print out the units for reaction rate constants. 2003-08-02 02:16 hkmoffa * Cantera/src/transport/: MixTransport.cpp, MixTransport.h, MultiTransport.cpp, MultiTransport.h, TransportBase.h, TransportFactory.cpp, TransportFactory.h: Added a function to MixTransport and MultiTransport that returns all of the raw transport data input from the original database. I am using this in cttables for the print out to provide closure to the user's expectations. 2003-08-01 22:50 hkmoffa * Cantera/src/State.h: Added one more routine, needed to get at private data 2003-08-01 22:13 hkmoffa * Cantera/src/ctml.cpp: Slight change in comment 2003-08-01 21:44 hkmoffa * Cantera/src/ctvector.cpp: Check for null before deleting or copying. Not strictly necessary, but good form. 2003-08-01 21:43 hkmoffa * Cantera/src/mix_defs.h: Added descriptions of the ThermoPhase classes known to this routine. 2003-08-01 21:42 hkmoffa * Cantera/src/ctml.cpp: UPgraded one error condition statement 2003-07-30 00:37 dggoodwin * Cantera/src/State.h: moved some methods to State.cpp 2003-07-30 00:32 dggoodwin * Cantera/src/State.cpp: initial import 2003-07-25 22:46 hkmoffa * Cantera/src/: xml.cpp, xml.h: Fixed several serious errors and added a couple of routines. 1) the read operation would hash any quoted string with a space character in it. 2) changed children() to return a reference rather than the complete object 3) write() would leave off the final endl character. This has been fixed. Additions: copy() copyUnion(): union of two trees; this routine may be problematic findXMLPhase(): phase lookup. Notes: find_XML() still contains a memory leak. 2003-07-24 17:58 hkmoffa * Cantera/src/Kinetics.h: Fixed an error in the Constructor function. m_indexPhase wasn't being set at all 2003-07-23 23:54 hkmoffa * Cantera/src/Kinetics.h: Added a lot of comments to the header file 2003-07-23 23:53 hkmoffa * Cantera/src/ConstDensityThermo.h: Took out an unnecessary redefinition of m_kk from an inherited class 2003-07-23 23:51 hkmoffa * Cantera/src/stringUtils.cpp: Slight formatting change 2003-07-23 17:41 hkmoffa * Cantera/src/StoichManager.h: Added comments to the file 2003-07-21 18:28 hkmoffa * Cantera/src/Elements.h: Took out a surplus doxygen comment about the Cantera Namespace. It created an error during doxygen compilation 2003-07-21 18:26 hkmoffa * Cantera/src/ThermoPhase.h: Added more doxygen comments to the files. Added a catch/throw block to setstate_TPX(). 2003-07-21 18:08 hkmoffa * Cantera/src/State.h: Commented the member data. 2003-07-21 18:02 hkmoffa * Cantera/src/Constituents.h: Took out a double nested @name that gave a warning to doxygen 2003-07-18 22:19 hkmoffa * Cantera/src/Phase.h: Added comments about m_kk needing to be restated in this class. 2003-07-07 18:45 hkmoffa * Cantera/src/ResidEval.h: Added more functions to the virtual base class. This will mean that all classes that inherit from this class will be broken until they too add definitions for these functions. 2003-07-07 18:39 hkmoffa * Cantera/src/converters/ck2ctml.cpp: Commented out several statically defined functions that were not used in the file. 2003-07-07 17:35 hkmoffa * Cantera/src/SolidCompound.h: Fixed a compiler warning. Linux warns against initialization lists which are not in the same order as items in the class itself. 2003-07-04 09:35 dggoodwin * tools/bin/finish_install.py: added 'source setup_cantera' 2003-07-04 09:18 dggoodwin * tools/bin/finish_install.py: added warning if the Python interface does not install. 2003-07-03 18:23 hkmoffa * Cantera/src/Array.h: Added the function ptrColumn(), which returns a pointer to the top of a column of the matrix. 2003-06-27 16:08 dggoodwin * Cantera/src/converters/ck2ctml.cpp: corrected bug in addTransport 2003-06-27 16:07 dggoodwin * tools/bin/finish_install.py: added script to set matlab path 2003-06-11 23:33 hkmoffa * Cantera/src/.cvsignore: Added another file to this list 2003-06-10 18:39 hkmoffa * Cantera/src/misc.cpp: Fixed a typo in a comment 2003-06-10 18:32 hkmoffa * test_problems/silane_equil/.cvsignore: Added a file to the ignore list, created during the test 2003-06-10 17:27 hkmoffa * Cantera/src/Makefile.in: Uncommented the tpx rule 2003-06-10 17:26 hkmoffa * Cantera/matlab/Makefile.in: Took out the references to the directories, 1D/@Domain1D/private and 1D/@Stack/private. They don't currently exist in the present version of the distribution. 2003-06-10 17:07 hkmoffa * include/.cvsignore: Added a .cvsignore file 2003-06-10 17:02 hkmoffa * tools/templates/: f77/.cvsignore, cxx/.cvsignore: Added a .cvsignore file 2003-06-10 02:19 hkmoffa * Cantera/cxx/.cvsignore: Added this file so that cvs update doesn't flag Makefile 2003-06-10 00:02 hkmoffa * tools/src/.cvsignore: Added a file to the ignore list 2003-06-08 17:18 dggoodwin * Cantera/matlab/cantera/@Transport/trans_hndl.m: initial import 2003-06-08 16:52 dggoodwin * Cantera/: cxx/writelog.cpp, python/src/writelog.cpp, matlab/cantera/private/write.cpp: initial import 2003-06-08 16:41 dggoodwin * Cantera/src/oneD/boundaries1D.cpp: initial import 2003-05-13 21:43 dggoodwin * Cantera/src/: DASPK.h, InterfaceKinetics.cpp, ReactionPath.cpp, ReactionPath.h, funcs.cpp, importCTML.cpp, misc.cpp, oneD/Inlet1D.h, oneD/Makefile.in, oneD/MultiNewton.cpp, oneD/OneDim.cpp, oneD/OneDim.h, oneD/Resid1D.h, oneD/Sim1D.cpp, oneD/Sim1D.h, oneD/StFlow.cpp, oneD/StFlow.h, oneD/newton_utils.cpp, oneD/refine.cpp, oneD/refine.h: - 2003-05-06 16:20 dggoodwin * tools/templates/cxx/: demo.cpp, demo.mak.in: fixed errors 2003-05-06 15:36 dggoodwin * tools/templates/cxx/: demo.cpp, demo.mak.in: initial import 2003-04-24 11:48 dggoodwin * Cantera/python/examples/function1.py: initial import 2003-04-21 20:16 dggoodwin * tools/doc/: Cantera.cfg, ct.css, footer.html, header.html: initial import 2003-04-21 11:55 dggoodwin * Makefile.in: corrected lib directory 2003-04-20 16:40 dggoodwin * Cantera/matlab/Makefile.in: fixed library in Makefile.in 2003-04-20 15:26 dggoodwin * Cantera/: matlab/.cvsignore, matlab/cantera/.cvsignore, python/.cvsignore, src/.cvsignore: added .cvsignore in mattlab 2003-04-20 15:21 dggoodwin * config/: configure, configure.in: added target to buildlib 2003-04-20 15:18 dggoodwin * Cantera/python/: Makefile.in, setup.py, setup.py.in: perform configuration of setup.py 2003-04-19 01:19 dggoodwin * include/: GRI30.h, onedim.h, reactionpaths.h, transport.h, zerodim.h: minor cleanup 2003-04-18 13:00 dggoodwin * tools/templates/f77/: demo.mak.in, demo_ftnlib.cpp, sample.mak.in: renamed sample.mak.in to demo.mak.in 2003-04-14 19:57 dggoodwin * .cvsignore, INSTALLING, License.rtf, License.txt, Makefile.in, README, config.h, config.h.in, configure, apps/README.txt, apps/MixMaster/.cvsignore, apps/MixMaster/CompositionFrame.py, apps/MixMaster/ControlPanel.py, apps/MixMaster/DataFrame.py, apps/MixMaster/DataGraph.py, apps/MixMaster/Edit.py, apps/MixMaster/ElementFrame.py, apps/MixMaster/GraphFrame.py, apps/MixMaster/__init__.py, apps/MixMaster/config.py, apps/MixMaster/flowpanel.py, Cantera/.cvsignore, Cantera/Makefile.in, Cantera/clib/src/.cvsignore, Cantera/clib/src/Cabinet.h, Cantera/clib/src/Makefile.in, Cantera/clib/src/Storage.cpp, Cantera/clib/src/Storage.h, Cantera/clib/src/clib_defs.h, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/clib/src/ctbdry.cpp, Cantera/clib/src/ctbdry.h, Cantera/clib/src/ctfunc.cpp, Cantera/clib/src/ctfunc.h, Cantera/clib/src/ctnum.cpp, Cantera/clib/src/ctnum.h, Cantera/clib/src/ctreactor.cpp, Cantera/clib/src/ctreactor.h, Cantera/clib/src/ctrpath.cpp, Cantera/clib/src/ctrpath.h, Cantera/clib/src/ctstagn.cpp, Cantera/clib/src/ctstagn.h, Cantera/clib/src/ctsurf.cpp, Cantera/clib/src/ctsurf.h, Cantera/clib/src/ctxml.cpp, Cantera/clib/src/ctxml.h, Cantera/cxx/README, Cantera/lib/README, Cantera/matlab/Makefile.in, Cantera/matlab/setup_matlab.py, Cantera/matlab/cantera/Contents.m, Cantera/matlab/cantera/GRI30.m, Cantera/matlab/cantera/IdealGasMix.m, Cantera/matlab/cantera/MassFlowController.m, Cantera/matlab/cantera/Reservoir.m, Cantera/matlab/cantera/Valve.m, Cantera/matlab/cantera/adddir.m, Cantera/matlab/cantera/air.m, Cantera/matlab/cantera/build.m, Cantera/matlab/cantera/buildux.m, Cantera/matlab/cantera/buildwin.m, Cantera/matlab/cantera/ck2ctml.m, Cantera/matlab/cantera/conhp.m, Cantera/matlab/cantera/constants.m, Cantera/matlab/cantera/conuv.m, Cantera/matlab/cantera/gasconstant.m, Cantera/matlab/cantera/geterr.m, Cantera/matlab/cantera/mexopts.sh, Cantera/matlab/cantera/oneatm.m, Cantera/matlab/cantera/reactor_ode.m, Cantera/matlab/cantera/@FlowDevice/FlowDevice.m, Cantera/matlab/cantera/@FlowDevice/clear.m, Cantera/matlab/cantera/@FlowDevice/install.m, Cantera/matlab/cantera/@FlowDevice/massFlowRate.m, Cantera/matlab/cantera/@FlowDevice/setMassFlowRate.m, Cantera/matlab/cantera/@FlowDevice/setValveCoeff.m, Cantera/matlab/cantera/@FlowDevice/private/flowdevicemethods.m, Cantera/matlab/cantera/@Kinetics/Kinetics.m, Cantera/matlab/cantera/@Kinetics/clear.m, Cantera/matlab/cantera/@Kinetics/creationRates.m, Cantera/matlab/cantera/@Kinetics/destructionRates.m, Cantera/matlab/cantera/@Kinetics/destruction_rates.m, Cantera/matlab/cantera/@Kinetics/equil_Kc.m, Cantera/matlab/cantera/@Kinetics/hndl.m, Cantera/matlab/cantera/@Kinetics/isReversible.m, Cantera/matlab/cantera/@Kinetics/kinetics_hndl.m, Cantera/matlab/cantera/@Kinetics/multiplier.m, Cantera/matlab/cantera/@Kinetics/nReactions.m, Cantera/matlab/cantera/@Kinetics/nTotalSpecies.m, Cantera/matlab/cantera/@Kinetics/netProdRates.m, Cantera/matlab/cantera/@Kinetics/reactionEqn.m, Cantera/matlab/cantera/@Kinetics/rop.m, Cantera/matlab/cantera/@Kinetics/rop_f.m, Cantera/matlab/cantera/@Kinetics/rop_net.m, Cantera/matlab/cantera/@Kinetics/rop_r.m, Cantera/matlab/cantera/@Kinetics/rxnEqs.m, Cantera/matlab/cantera/@Kinetics/setMultiplier.m, Cantera/matlab/cantera/@Kinetics/stoich_net.m, Cantera/matlab/cantera/@Kinetics/stoich_p.m, Cantera/matlab/cantera/@Kinetics/stoich_r.m, Cantera/matlab/cantera/@Kinetics/ydot.m, Cantera/matlab/cantera/@Kinetics/private/delkinetics.cpp, Cantera/matlab/cantera/@Kinetics/private/isrev.cpp, Cantera/matlab/cantera/@Kinetics/private/kin_get.cpp, Cantera/matlab/cantera/@Kinetics/private/kin_set.cpp, Cantera/matlab/cantera/@Kinetics/private/kinetics_get.m, Cantera/matlab/cantera/@Kinetics/private/kinetics_set.m, Cantera/matlab/cantera/@Kinetics/private/newkinetics.cpp, Cantera/matlab/cantera/@Kinetics/private/production.cpp, Cantera/matlab/cantera/@Kinetics/private/pstoich.cpp, Cantera/matlab/cantera/@Kinetics/private/rop.cpp, Cantera/matlab/cantera/@Kinetics/private/rstoich.cpp, Cantera/matlab/cantera/@Kinetics/private/rxnstring.cpp, Cantera/matlab/cantera/@Reactor/Reactor.m, Cantera/matlab/cantera/@Reactor/advance.m, Cantera/matlab/cantera/@Reactor/clear.m, Cantera/matlab/cantera/@Reactor/density.m, Cantera/matlab/cantera/@Reactor/enthalpy_mass.m, Cantera/matlab/cantera/@Reactor/hndl.m, Cantera/matlab/cantera/@Reactor/insert.m, Cantera/matlab/cantera/@Reactor/intEnergy_mass.m, Cantera/matlab/cantera/@Reactor/mass.m, Cantera/matlab/cantera/@Reactor/massFraction.m, Cantera/matlab/cantera/@Reactor/massFractions.m, Cantera/matlab/cantera/@Reactor/pressure.m, 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tools/testtools/tok_input_util.h: Initial import. 2003-04-14 19:57 dggoodwin * .cvsignore, INSTALLING, License.rtf, License.txt, Makefile.in, README, config.h, config.h.in, configure, apps/README.txt, apps/MixMaster/.cvsignore, apps/MixMaster/CompositionFrame.py, apps/MixMaster/ControlPanel.py, apps/MixMaster/DataFrame.py, apps/MixMaster/DataGraph.py, apps/MixMaster/Edit.py, apps/MixMaster/ElementFrame.py, apps/MixMaster/GraphFrame.py, apps/MixMaster/__init__.py, apps/MixMaster/config.py, apps/MixMaster/flowpanel.py, Cantera/.cvsignore, Cantera/Makefile.in, Cantera/clib/src/.cvsignore, Cantera/clib/src/Cabinet.h, Cantera/clib/src/Makefile.in, Cantera/clib/src/Storage.cpp, Cantera/clib/src/Storage.h, Cantera/clib/src/clib_defs.h, Cantera/clib/src/ct.cpp, Cantera/clib/src/ct.h, Cantera/clib/src/ctbdry.cpp, Cantera/clib/src/ctbdry.h, Cantera/clib/src/ctfunc.cpp, Cantera/clib/src/ctfunc.h, Cantera/clib/src/ctnum.cpp, Cantera/clib/src/ctnum.h, Cantera/clib/src/ctreactor.cpp, 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Cantera/python/src/ctfunc_methods.cpp, Cantera/python/src/ctfuncs.cpp, Cantera/python/src/ctkinetics.cpp, Cantera/python/src/ctkinetics.def, Cantera/python/src/ctkinetics_methods.cpp, Cantera/python/src/ctmodule.cpp, Cantera/python/src/ctnumerics.cpp, Cantera/python/src/ctnumerics.def, Cantera/python/src/ctphase.cpp, Cantera/python/src/ctphase.def, Cantera/python/src/ctphase_methods.cpp, Cantera/python/src/ctpy.cpp, Cantera/python/src/ctpybndry.cpp, Cantera/python/src/ctpyfunc.cpp, Cantera/python/src/ctpyreactor.cpp, Cantera/python/src/ctpyrpath.cpp, Cantera/python/src/ctpysurf.cpp, Cantera/python/src/ctpyxml.cpp, Cantera/python/src/ctreactor_methods.cpp, Cantera/python/src/ctrpath_methods.cpp, Cantera/python/src/ctsurf.cpp, Cantera/python/src/ctsurf.def, Cantera/python/src/ctsurf_methods.cpp, Cantera/python/src/ctthermo.cpp, Cantera/python/src/ctthermo.def, Cantera/python/src/ctthermo_methods.cpp, Cantera/python/src/cttransport.cpp, Cantera/python/src/cttransport.def, 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