Commit graph

540 commits

Author SHA1 Message Date
Ray Speth
ee9b153efb Improve performance of reading species info from XML
Avoid an O(N) lookup for the thermo info for each species. Using an
unordered_map would be even better, but there's no portable way to do that
without Boost.
2013-06-28 21:24:42 +00:00
Ray Speth
65a97d9b62 [1D] Restore domains based on sequence rather than name
Instead of searching the XML tree for nodes where the "id" attribute matches,
require that the domains occur in order from left to right (corresponding to how
they are saved).

Fixes Issue 164.
2013-06-26 00:23:07 +00:00
Ray Speth
e7754fbcf2 [1D] Deprecate vector version of Domain1D::setBounds
The scalar version is actually easier to use in most cases.
2013-06-24 15:22:45 +00:00
Ray Speth
3e4c944416 [1D] Simplify interface for setting tolerances 2013-06-24 15:22:38 +00:00
Ray Speth
9d2f7e0220 Deprecate report/modifyParameters methods of SpeciesThermoInterpType 2013-06-24 15:22:25 +00:00
Ray Speth
27f2ccc647 Deprecate Transport::setParameters 2013-06-24 15:22:19 +00:00
Ray Speth
8c95ee035e Deprecate the setParameters and getParameters methods of ThermoPhase 2013-06-24 15:22:08 +00:00
Ray Speth
f7ed3c17f8 Deprecate SpeciesThermo::reportParams 2013-06-24 15:22:00 +00:00
Ray Speth
d060cba434 Fix a memory error in IdealGasPhase::cv_vib and cv_tr
The array 'c' is only long enough to hold the thermo parameters filled in
by the StatMech class, so it's necessary to make sure the type is correct
first and abort if it's not, rather than calling reportParams first and
corrupting the stack.
2013-06-24 15:21:55 +00:00
Ray Speth
123544e4f7 [VCS Equil] Eliminate unnecessary calls to reportParams 2013-06-24 15:21:51 +00:00
Ray Speth
9b31092e90 Deprecate PrintCtrl and LogPrintCtrl 2013-06-24 15:21:46 +00:00
Ray Speth
89664920e8 Eliminated use of PrintCtrl in ChemEquil debug mode 2013-06-24 15:21:40 +00:00
Ray Speth
94ac608adb [Kinetics] Consider third-body efficiencies in duplicate reaction checks 2013-06-21 20:58:02 +00:00
Ray Speth
ac0ccec7f5 Use ReactionData struct to store info in class rxninfo
This eliminates the need the data members of class rxninfo that were
just duplicates of what is in the ReactionData struct.
2013-06-21 20:57:53 +00:00
Ray Speth
ca3057ce08 [Doc] Add Transport classes to the tranprops group 2013-06-19 22:08:58 +00:00
Ray Speth
0945a6de9b [clib] Enable access to critical properties of non-pure phases
Previously, only the critical properties of PureFluidPhase objects could be
accessed, but there are other ThermoPhase classes (specifically,
RedlichKwongMFTP) which overload the critTemperature, critPressure, and
critDensity functions.
2013-06-19 15:26:54 +00:00
Ray Speth
b3708cdab5 [Kinetics] Allow reactions with A = 0.0 2013-06-17 14:20:30 +00:00
Ray Speth
97ff4fa2a5 [SCons] Fix handling of blas_lapack_dir and boost_lib_dir
These need to be added to LIBPATH as entries in a list, otherwise
LIBPATH ends up concatenating the strings for each as a single entry.
2013-06-14 23:06:29 +00:00
Ray Speth
7b7e578500 [Transport] Avoid unnecessary L-matrix solves 2013-06-14 23:06:24 +00:00
Ray Speth
e013e8b966 Add __version__ attribute to (legacy) Python module 2013-06-13 22:50:40 +00:00
Ray Speth
496dfe31ce Remove extraneous constructor for XML_Node 2013-06-13 22:50:35 +00:00
Ray Speth
77ed000090 Deprecate WF93 falloff parameterization 2013-06-13 22:50:30 +00:00
Ray Speth
112d9b5093 Remove unusable KINETICS_WITH_INTERMEDIATE_ZEROED_PHASES macro 2013-06-13 22:50:26 +00:00
Ray Speth
75e586da0f Remove unusable CHEMKIN_COMPATIBILITY_MODE macro 2013-06-13 22:50:21 +00:00
Ray Speth
9740980c5d Deprecate class GRI_30_Kinetics 2013-06-13 22:50:14 +00:00
Victor Brunini
e17d099b96 Fix lower_bound not found build error. 2013-06-11 19:41:30 +00:00
Ray Speth
843f2ad337 Deprecate ctml::getFloats 2013-06-06 15:33:11 +00:00
Ray Speth
18a102c91f Deprecate unused spectroscopy-related classes 2013-06-06 15:33:05 +00:00
Ray Speth
305e4eec54 Deprecate Kinetics::activationEnergies 2013-06-06 15:33:00 +00:00
Ray Speth
a972a7f558 Deprecate class Elements 2013-06-06 15:32:56 +00:00
Ray Speth
a6614b87bb [Doxygen] Fix some incorrect/missing "@file" commands 2013-06-06 15:32:30 +00:00
Ray Speth
11170a0e32 Deprecate class AqueousKinetics 2013-06-05 17:09:59 +00:00
Ray Speth
8757836d64 Deprecate stripLTWScstring 2013-06-05 17:09:54 +00:00
Ray Speth
2483e39ae5 Allow tests to suppress deprecation warnings
This prevents certain tests from failing comparisons with blessed output files.
2013-06-05 17:09:46 +00:00
Ray Speth
56d481785c Deprecate HTML log files 2013-06-05 17:09:39 +00:00
Ray Speth
64bfdcc952 Deprecate support for Sundials 2.2 and 2.3. 2013-06-05 17:09:30 +00:00
Ray Speth
633576afe6 Deprecate class FtnTransport 2013-06-05 17:09:26 +00:00
Ray Speth
b888df70c4 Clean up Doxygen docs for some liquid transport related classes 2013-06-05 17:09:21 +00:00
Ray Speth
d253fc0d63 Eliminate redundant standard library includes 2013-06-05 17:08:13 +00:00
Ray Speth
be1e95576e Resolve some Doxygen warnings 2013-06-05 03:09:13 +00:00
Ray Speth
f75ba112f9 Clean up Doxygen docs for 1D simulation classes 2013-06-05 03:09:03 +00:00
Ray Speth
3305698b6a Add support for Visual Studio 2012 2013-06-03 22:17:23 +00:00
Ray Speth
00da5bead5 Remove some dead code 2013-06-03 22:17:19 +00:00
Ray Speth
8d004658d7 Update Doxygen docs for other Reactor-related classes 2013-06-03 22:17:12 +00:00
Ray Speth
5a94876c91 Update Doxygen docs for class ReactorBase and descendants 2013-06-03 22:17:05 +00:00
Ray Speth
9bb90a395e Clean up Doxygen docs for MMColisionInt 2013-06-03 22:16:56 +00:00
Ray Speth
0fc6861892 Clean up Doxygen docs for LiquidTranInteraction and descendants 2013-06-03 22:16:52 +00:00
Ray Speth
6a1ebcd9d7 Clean up Doxygen docs for TransportParams and descendants 2013-06-03 22:16:46 +00:00
Ray Speth
a8fea51046 Clean up Doxygen docs for TransportFactory 2013-06-03 22:16:41 +00:00
Ray Speth
098a87cdcd Clean up Doxygen documentation for class Transport and descendants 2013-06-03 22:16:29 +00:00