Write plain text to the common Cantera logger to be more consistent with the
verbose/debug logging from other parts of Cantera. This simplifies several of
the transport initialization functions, and eliminates the need for class
XML_Writer.
These functions are used by some of the examples, and show how custom
reactor-like models can be implemented in Matlab. They are useful mostly as a
basis for user modifications.
The threshold for printing species is a new, optional parameter to the
'report' function. If any species are excluded, the total number of
minor species and their aggregate mass and mole fraction are printed.
There are three problems with this function. It does not work, since
it calls ctmethods with the wrong number of arguments. Even if that
were fixed, it wouldn't do what it claims, as the method it calls
generates a CTI file, not an XML file. Finally, it is redundant, as
the 'ck2cti' function can be used for generating the CTI file, and the
CTI to XML conversion is handled automatically when importing the
phase.
Therefore, this function is being removed.
A network with a single reactor can be created with either:
ReactorNet({reactor}), i.e. a single element cell array
or, the new way:
ReactorNet(reactor)
These changes make it unnecessary to copy header files around during
the build process, which tends to confuse IDEs and debuggers. The
headers which comprise Cantera's external C++ interface are now in
the 'include' directory.
All of the samples and demos are now in the 'samples' subdirectory.
