Commit graph

6608 commits

Author SHA1 Message Date
EmilAtz
5b2406470c Adjustment of importPhase to Solution in MatLab documentation
Searched for importPhase and updated respective locations to Solution.
Modified wording around changes.
2016-12-21 15:39:54 -05:00
EmilAtz
d707e059e0 [matlab/doc] Update importPhase to Solution for matlab input-tutorial
Updated to importPhase to Solution to match current function usage
2016-12-21 15:39:54 -05:00
Ray Speth
2284bc9186 [Transport] Fix transport geometry flag check for charged species
Electrons should not be counted when determining the number of atoms in a
molecule and the corresponding allowable molecular geometries.
2016-12-17 19:09:37 -05:00
Ray Speth
b20c0c6699 [Doc] Fix depth of ck2cti docs 2016-12-10 19:23:21 -05:00
Ray Speth
733ec18601 [CI] Upload coverage data to codecov.io 2016-12-10 18:44:30 -05:00
Ray Speth
fa699be425 [SCons] Clang can also generate coverage info 2016-12-10 18:44:30 -05:00
Bryan W. Weber
b495fe8913 [SCons] Fix missing comma in finding 3to2 on non-Windows 2016-12-09 20:13:22 -05:00
Bryan W. Weber
9f198f028e [CI] Add Python 3 to build 2016-12-09 20:13:22 -05:00
Bryan W. Weber
ca6f8f4fd1 [CI] Parallel build on Windows requires pywin32 2016-12-09 20:13:22 -05:00
Bryan W. Weber
29e935c1d0 [CI] Add 3to2 and VERBOSE options 2016-12-09 20:13:22 -05:00
Bryan W. Weber
2024d0f08a [SCons] Fix calling 3to2 on Windows with conda 3to2 package
Fixes #408
2016-12-09 20:13:22 -05:00
Bryan W. Weber
086e640e46 [SCons] Use subprocess.check_output in getCommandOutput 2016-12-09 20:13:22 -05:00
Santosh Shanbhogue
d1df40af87 Separate transport data from comments in parseTransportData 2016-12-09 19:59:52 -05:00
Santosh Shanbhogue
3f382e2590 Add test to catch superflous entries in a tranport file 2016-12-09 19:59:52 -05:00
Santosh Shanbhogue
06578612eb Identify species with bad transport entries 2016-12-09 19:59:52 -05:00
Bryan W. Weber
c7db81f33c [Doc] Document the ReactorSurface class in Python
Fixes #407
2016-12-09 19:51:46 -05:00
arghdos
84e6775ee3 remove special treatment of falloff #'s, resolves #404 2016-12-06 21:30:20 -05:00
Santosh Shanbhogue
08b14b24ed [Doc] Add more links to Jupyter notebooks 2016-12-03 13:24:09 -05:00
Ray Speth
730107cdba [CI] Return exit code from 'scons test' to make Appveyor status correct
Resolves #382
2016-11-29 22:05:51 -05:00
Ray Speth
4c1ab0c49d [CI] Fix errors upgrading pip in-place on Appveyor 2016-11-29 22:04:55 -05:00
Ray Speth
1b4ea04277 [Doc] Update prereqs for using Windows binaries 2016-11-29 20:36:50 -05:00
Ray Speth
8ee7d432e1 [Doc] Warn OS X users about out-of-date system Numpy 2016-11-29 20:36:50 -05:00
Ray Speth
c6412a56a4 [Doc] Add DOI reserved for 2.3.0 release 2016-11-29 20:36:50 -05:00
Ray Speth
4cc8d72e10 [Doc] Update OS/Python versions for which binary installers are provided 2016-11-29 20:36:50 -05:00
Ray Speth
95e1ee49dc Bump version to 2.3.0b1 2016-11-29 20:36:50 -05:00
Ray Speth
89e729f6b8 [Doc] Update versions of supported dependencies 2016-11-29 20:36:50 -05:00
Kyle Niemeyer
dcebc5f01f [Doc] Fixed conda link in README
Original link in README for conda (https://anaconda.org/cantera/repo?type=conda&label=main) seems to be broken, so replaced with new link (https://anaconda.org/Cantera/cantera).
2016-11-29 09:53:35 -05:00
Bryan W. Weber
4829310f11 Add messages to the assertion statements in thermo.pyx
Fixes #335
2016-11-27 23:28:21 -05:00
Ray Speth
0787e4194e [Base] Fix parsing composition strings when last name contains a colon
If the last species name in a composition string contained a colon, it would not
be parsed correctly.
2016-11-27 17:41:37 -05:00
Ray Speth
aa4d07f543 [Thermo] Allow discontinuous thermo warnings to be suppressed
Resolves #354
2016-11-26 00:57:23 -05:00
Ray Speth
469cc63d99 Remove unused code from ReactionPathBuilder 2016-11-25 23:42:01 -05:00
Ray Speth
d7819af947 [SCons] Make versioning of cantera_shared optional
Also, disable by default on MinGW to work around a SCons bug
2016-11-25 23:42:00 -05:00
Ray Speth
1e87756a97 [CI] Run 'scons build' in parallel
Both Travis and Appveyor make at least two cores available
2016-11-25 23:41:56 -05:00
Ray Speth
8e6d53d18b Enable parsing of composition strings when species names contain colons 2016-11-25 18:19:38 -05:00
Ray Speth
1db103cd87 Fix Phase.species_index when species name contains a colon 2016-11-25 18:19:38 -05:00
Ray Speth
3300611379 Allow colons in species names in CTI phase definitions 2016-11-25 18:19:38 -05:00
Bryan W. Weber
05ad05c904 [ck2cti/Test] Add tests for explicit reverse reaction equal to zero 2016-11-25 18:18:38 -05:00
Bryan W. Weber
a9814a1216 [ck2cti] Don't include reactions with explicit reverse rate equal to zero 2016-11-25 18:18:38 -05:00
Bryan W. Weber
6b32c73eee [ck2cti] Use logging.error when a thermo entry can't be read.
This matches the use when a reaction line can't be read.
2016-11-25 18:18:38 -05:00
Bryan W. Weber
ce90a798c5 [ck2cti] Raise ValueError in compatible_quantities instead of Exception 2016-11-25 18:18:38 -05:00
Bryan W. Weber
990f995796 [ck2cti] Minor spacing updates to improve legibility 2016-11-25 18:18:38 -05:00
Bryan W. Weber
bed546ad92 [ck2cti] Remove unused isnumberlike function 2016-11-25 18:18:38 -05:00
Bryan W. Weber
e250d23435 [ck2cti] remove duplicate sys import 2016-11-25 18:18:38 -05:00
Kyle Niemeyer
3782543de5 Add Code of Conduct
Adopt a Code of Conduct for interactions on the GitHub repo and User Group, to
set expectations on how people should behave and interact with each other, and
encourage/attract new members of the community.
2016-11-22 20:24:45 -05:00
Ray Speth
d55ffa9b5c Add note about license and copyright of contributions 2016-11-22 18:42:47 -05:00
Bryan W. Weber
0c400a9a6f Add CONTRIBUTING.md 2016-11-22 18:42:47 -05:00
Bryan W. Weber
8ef33161a1 Add PULL_REQUEST_TEMPLATE.md 2016-11-22 18:42:47 -05:00
Bryan W. Weber
557e752fcb Add ISSUE_TEMPLATE.md 2016-11-22 18:42:47 -05:00
Ray Speth
50ad75f2a2 [Reactor] Make ReactorNet uncopyable 2016-11-14 20:34:45 -05:00
Ray Speth
b7fad42cda [Thermo] Check for null species thermo when adding species 2016-11-14 19:46:23 -05:00