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724 commits

Author SHA1 Message Date
Ray Speth
510b25b884 Implementation of P-log rate expressions 
Also includes skeleton for implementing Chebyshev rates.
 2012-03-30 23:47:50 +00:00
Ray Speth
234439d10f Make use of the ReactionData struct when installing reactions 2012-03-30 23:47:38 +00:00
Ray Speth
b4c07978e6 Implemented parsing of P-log and Chebyshev reactions from CTML 2012-03-30 23:47:31 +00:00
Ray Speth
8ea4ae728a Moved a few standard library includes to more local scopes 2012-03-23 22:16:04 +00:00
Ray Speth
4506ee2f8a Fixed some compiler warning issues 2012-03-15 19:55:18 +00:00
Ray Speth
870ae7ede2 Fixed compilation of the RedlichKwongMFTP class 
Enabled with the build option "with_real_gases".
Class has no test cases.
 2012-03-15 19:52:35 +00:00
Ray Speth
b3ae0c9208 Use quotes instead of angle brackets for non-system header #includes 2012-03-15 19:52:16 +00:00
Ray Speth
ca4212cc57 Removed a number of unused / redundant typedefs 2012-03-15 19:51:57 +00:00
Ray Speth
d8edde0264 Expanded array bounds checking in C interface functions 2012-03-15 19:51:37 +00:00
Ray Speth
b145ee407d Moved m_nsp up to Transport from derived classes 2012-03-15 19:51:25 +00:00
Ray Speth
1e8870191d Moved m_kk up to the base Kinetics class 2012-03-15 19:51:16 +00:00
Ray Speth
7676097b4a Removed execute permission from nonexecutable files 2012-03-13 17:32:41 +00:00
Ray Speth
0045bc0a71 Removed unused tmpDir and sleep functions 2012-03-09 23:00:16 +00:00
Ray Speth
92017de067 Removed some vestigial ifdef blocks 2012-03-09 22:58:17 +00:00
Ray Speth
f3968fdda8 Removed unnecessary manual memory management from ChemEquil 2012-03-09 22:57:57 +00:00
Ray Speth
312b7ff2c4 Deprecated the global "report(ThermoPhase&)" function 2012-03-09 22:57:35 +00:00
Ray Speth
c440373aba Folded class Elements into class Phase 2012-03-09 22:57:18 +00:00
Ray Speth
7e39e91b5b Cleaned up documentation and comments for class Phase 2012-03-09 22:57:05 +00:00
Ray Speth
78a093b485 Folded class Constituents into class Phase 2012-03-09 22:56:11 +00:00
Ray Speth
e41f43300f Folded class State into class Phase 2012-03-09 22:55:34 +00:00
Ray Speth
775ed1c609 Moved overview of Phase/Thermophase into the doxygen directory 2012-03-09 22:55:16 +00:00
Ray Speth
9753cc7c40 Deprecated the unused "userInterface" function 2012-03-09 22:54:47 +00:00
Ray Speth
0312f6dc21 Removed exception-based flow control from Sim1D::solve 2012-03-09 22:54:35 +00:00
Ray Speth
692f1249ae Deprecated some unused functions in SpeciesThermoMgr.h 2012-03-07 00:51:56 +00:00
Ray Speth
11d97dfbbf Simplified definitions in class SpeciesThermoDuo 2012-03-07 00:51:51 +00:00
Ray Speth
55db95974c Removed deprecated SpeciesThermo1 class 2012-03-07 00:51:46 +00:00
Ray Speth
3bff32dd55 Fixed problems that generated warnings with the Intel compiler 2012-03-07 00:51:13 +00:00
Ray Speth
9cdf079d2d Added templated generic exception handler for clib functions 2012-03-05 20:46:34 +00:00
Ray Speth
54efbaa320 Rewrote exception handling to be more general and more explicit 
CanteraError inerits from std:exception, so now it has a what() method
that is used to print a message describing the exception. Adding an
exception to the Cantera error stack now requires explicitly calling
the .save() method.
 2012-03-05 20:45:56 +00:00
Ray Speth
e3b5ee802e Contents of misc.cpp relocated 
The functions formerly defined in misc.cpp are now defined in the
source files corresponding to the header files where they were
declared.
 2012-03-05 20:45:31 +00:00
Ray Speth
6a9f3ea892 Marked some unused functions as deprecated 2012-03-01 00:44:31 +00:00
Ray Speth
8161a9aa5a Fixed incorrect documentation for getPureGibbs in some classes 2012-03-01 00:44:22 +00:00
Ray Speth
ffb7049a74 Marked a few unused member variables as deprecated 2012-02-28 19:01:50 +00:00
Ray Speth
bb72897c8b Deprecated the Kinetics::ID() method 
The type() method should be used instead.
 2012-02-28 19:01:27 +00:00
Ray Speth
e5da0d268d Fixed declaration of importSolution in StFlow 2012-02-28 19:01:20 +00:00
Ray Speth
981a04a325 Split Kinetics::kineticsSpeciesIndex into two separate functions 2012-02-27 18:15:41 +00:00
Ray Speth
236756fbf0 Removed rogue tabs in the C++ source code 2012-02-27 18:15:02 +00:00
Ray Speth
8bce9d7332 Fixed compiler warnings revealed by MinGW 2012-02-27 18:14:43 +00:00
Ray Speth
a4a81b94eb Deprecated SpeciesThermo::modifyParams 2012-02-27 18:14:29 +00:00
Ray Speth
b955395ed1 Skip cast from size_t to int when calling int2str 2012-02-27 18:14:17 +00:00
Ray Speth
af6303a67e Removed class ArrayViewer (use Array2D instead) 2012-02-27 18:14:08 +00:00
Ray Speth
6cc7f491a6 Removed some pointless comments 2012-02-27 18:14:00 +00:00
Ray Speth
8f4f72369e Use the associated Cabinet to look up an item's index 
This allowed removal the m_index member and associated methods
of the ThermoPhase, Kinetics, and Transport classes.
 2012-02-27 18:12:13 +00:00
Ray Speth
3648bfef39 Use of deprecated functions generates compiler warnings 2012-02-27 18:11:39 +00:00
Ray Speth
f1e807d314 Moved global variables from tpx namespace into class Substance 
This fixes failures in the pureFluid test on OSX with certain
compilier optimizations enabled.
 2012-02-27 18:11:28 +00:00
Ray Speth
437294ae00 Removed previously-deprecated array_fp typedef 2012-02-22 00:16:22 +00:00
Ray Speth
7b96fa73c4 Fixed an implicit standard library dependency 
This was preventing some of the tests from compiling
 2012-02-21 16:06:02 +00:00
Ray Speth
28270820a5 Use std::swap instead of homegrown alternatives 2012-02-21 16:05:53 +00:00
Ray Speth
35429de71c Fixed a bunch of spelling errors in the documentation and comments 2012-02-21 16:04:09 +00:00
Ray Speth
fe8a5d49a8 Use std::min and std::max instead of homegrown alternatives 2012-02-21 16:03:32 +00:00