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151 commits

Author SHA1 Message Date
Ray Speth
232e28d2c8 Check file modification time before reusing cached XML 2014-07-30 16:59:04 +00:00
Ray Speth
063c2a261a Eliminate redundancy between get_XML_File and get_CTML_Tree 
get_CTML_Tree and getCtmlTree are now deprecated in favor of get_XML_File
 2014-07-30 16:58:55 +00:00
Ray Speth
6866725b57 Simplify implementation of get_XML_File 
This is easier now that we don't have to write the XML file to disk
when importing from a CTI file.
 2014-07-30 16:58:52 +00:00
Ray Speth
67539df9f2 Fix #includes to work with Visual Studio 2013 2014-07-25 18:32:57 +00:00
Ray Speth
19e3a09980 Allow '~/' as alias for user's home directory when importing cti/xml 2014-07-10 22:33:20 +00:00
Ray Speth
a470502932 [Transport] Replace transport_log.xml with regular text logging 
Write plain text to the common Cantera logger to be more consistent with the
verbose/debug logging from other parts of Cantera. This simplifies several of
the transport initialization functions, and eliminates the need for class
XML_Writer.
 2014-06-20 18:44:59 +00:00
Ray Speth
3349a28d38 Update some deprecation warnings. 2014-06-20 18:44:39 +00:00
Ray Speth
e778afad32 Remove deprecated functions 2014-06-20 18:44:33 +00:00
Ray Speth
4b9e4da822 Fix some compiler warnings 2014-05-27 02:53:35 +00:00
Ray Speth
6c0cea5ee4 Standardize function used for writing a line of repeated characters 2014-05-27 02:53:06 +00:00
Ray Speth
789574ac80 Remove commented-out code 2014-05-27 02:52:21 +00:00
Harry Moffat
675df76b1c Fixed a long standing problem with the combination of storred XML files and duplicator functions. 
Now the complete XML file is storred within the ThermPhase object starting with the root node.
This is needed for later processing of kinetics and transport mechanisms when the ThermoPhase
file is duplicated and the original file is deleted.

xml() is now a const function, and still returns the same pointer.
setXMLdata() is a new function will stores the xml data.
 2014-05-20 19:02:20 +00:00
Ray Speth
7fff65cecd Remove previously-deprecated 'PrintCtrl' and 'LogPrintCtrl' classes. 2014-05-08 23:01:32 +00:00
Ray Speth
54ded64e4b Miscellaneous whitespace cleanup 2014-05-08 23:01:12 +00:00
Ray Speth
bc0346eae7 Avoid deadlocks in cti to ctml conversions on Windows 2014-05-06 14:39:48 +00:00
Ray Speth
8cfac61a83 Use configuration checks to determine names for 'isnan' and 'finite' 2014-05-03 17:39:33 +00:00
Ray Speth
beeaa21644 Deprecate unused stringUtils functions 2014-04-02 15:26:42 +00:00
Ray Speth
43546f870f fpValueCheck detects (invalid) decimal ponts in exponents 2014-04-02 15:26:31 +00:00
Ray Speth
4a6dd84f81 [Thermo] Check composition strings for invalid float literals 2014-04-02 15:26:20 +00:00
Ray Speth
9e4ae0d050 Deprecate unused global 'error' function 2014-03-28 23:12:36 +00:00
Ray Speth
de8a19ed0f Remove spaces adjacent to '::' in member function definitions 2014-03-24 04:03:30 +00:00
Ray Speth
95eb7ab3ba Remove newline after '::' in member function definitions 
This inconsistency makes it hard to directly search the code for a specific
member function definition.
 2014-03-24 04:03:09 +00:00
Ray Speth
7556b828f9 Introduce a more general method of caching results 
The ValueCache class is intended to standardize the method for implementing
value caching in Cantera, and to reduce the need to introduce additional member
variables to store cached variables and the thermodynamic state at which the
cached values were computed.

The initial usage is to replace the use of the m_tlast variable in IdealGasPhase
as an example.
 2014-03-18 00:48:38 +00:00
Harry Moffat
b328e396b0 screwed up and didn't check in a complete fix 2014-03-06 17:37:41 +00:00
Harry Moffat
a58fc91f01 Added back a routine that caused numerous downstream failures. 2014-03-06 04:02:01 +00:00
Ray Speth
c7ba8bfb84 Remove abandoned autotools build system 2014-03-04 17:38:53 +00:00
Ray Speth
0392147540 Fix integer sign/size warnings in XML-related functions 2014-02-21 19:08:40 +00:00
Ray Speth
44847515ca Fix compilation errors with isnan/isinf using Cygwin's GCC 2014-02-20 03:00:56 +00:00
Ray Speth
3015e90088 General cleanup of ctml functions 2014-02-06 22:58:49 +00:00
Ray Speth
d516d46f33 Remove unnecessary use of static_cast<int> 2014-01-31 23:15:09 +00:00
Ray Speth
3dc335565c Fix missing include in application.cpp 
Causes compilation errors on OS X 10.8.
 2014-01-31 03:44:27 +00:00
Ray Speth
ff9584105b Do implicit CTI to XML conversions without generating .xml files 
When instantiating a phase from a .cti file, do the conversion in memory,
without writing the XML representation to disk. This eliminates the unrequrested
XML files that Cantera normally generates, and also avoids errors when running
Cantera from a directory where the user does not have write permissons.
 2014-01-30 00:47:37 +00:00
Ray Speth
f3e0280716 Improve error handling when calling ck2cti and ctml_writer 
Only look for modules in the new location (inside the cantera package), and
print the path if they aren't found, to aid in debugging.
 2014-01-08 17:10:53 +00:00
Ray Speth
907bfa0a10 Eliminated possibility of throwing from XML_Node destructor 2014-01-06 18:45:52 +00:00
Ray Speth
ff75f77add Remove unnecessary m_nchildren variable from XML_Node 2014-01-06 18:45:41 +00:00
Ray Speth
b7885ea84a Simplify XML_Node::addChild implementations 2014-01-06 18:45:36 +00:00
Ray Speth
76a9c5e79c Remove unnecessary overload of XML_Node::addChild 2014-01-06 18:45:31 +00:00
Ray Speth
607955b9f2 Remove unnecessary conditional surrounding 'delete' statements 2014-01-06 18:45:19 +00:00
Ray Speth
f63f8ae57e Remove deprecated HTML logging functionality 2013-12-09 01:36:11 +00:00
Harry Moffat
cfa4493b51 Worked on fixing errors in the code that caused problems with downstream code. 
Took out single_species compilation option

took out some deprecated warnings

Fixed an error in copy constructors for thermo.

Still an error with PYTHONPATH and the test suite

 -- more to come.
 2013-09-02 00:58:28 +00:00
Ray Speth
c885a88817 Use fully qualified names for isnan, isinf, and finite 
Specify the versions in the global namespace, to avoid ambiguity
between these and the versions in namespace std that are available in
C++11.
 2013-10-21 22:12:57 +00:00
Ray Speth
dab827d763 [ck2cti] Make permissive mode default when run from Matlab or C++ 2013-09-12 16:04:13 +00:00
Ray Speth
8a58b12698 [ck2cti] Fix to work with Cython module when called from Matlab or C++ 2013-09-12 16:04:04 +00:00
Ray Speth
957ddc97ae Fix calls to ck2cti that pass through the C++ interface 2013-08-02 23:17:40 +00:00
Ray Speth
9a8dbf75f8 CTI to XML conversion works with either new or old Python module 2013-07-29 01:37:54 +00:00
Ray Speth
eb82cbc998 Remove undeclared function getNamedFloatArray 
This function has no declaration in any header file, so it is clearly not used
anywhere.
 2013-07-06 21:43:48 +00:00
Ray Speth
ebd4df76ab Fix some Doxygen warnings 2013-06-28 21:24:49 +00:00
Ray Speth
9b31092e90 Deprecate PrintCtrl and LogPrintCtrl 2013-06-24 15:21:46 +00:00
Ray Speth
496dfe31ce Remove extraneous constructor for XML_Node 2013-06-13 22:50:35 +00:00
Ray Speth
843f2ad337 Deprecate ctml::getFloats 2013-06-06 15:33:11 +00:00