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357 commits

Author SHA1 Message Date
Ray Speth
27f2ccc647 Deprecate Transport::setParameters 2013-06-24 15:22:19 +00:00
Ray Speth
8c95ee035e Deprecate the setParameters and getParameters methods of ThermoPhase 2013-06-24 15:22:08 +00:00
Ray Speth
f7ed3c17f8 Deprecate SpeciesThermo::reportParams 2013-06-24 15:22:00 +00:00
Ray Speth
9b31092e90 Deprecate PrintCtrl and LogPrintCtrl 2013-06-24 15:21:46 +00:00
Ray Speth
7c8d0824f3 Deprecate Cantera.h 2013-06-24 15:21:32 +00:00
Ray Speth
94ac608adb [Kinetics] Consider third-body efficiencies in duplicate reaction checks 2013-06-21 20:58:02 +00:00
Ray Speth
ac0ccec7f5 Use ReactionData struct to store info in class rxninfo 
This eliminates the need the data members of class rxninfo that were
just duplicates of what is in the ReactionData struct.
 2013-06-21 20:57:53 +00:00
Ray Speth
ca3057ce08 [Doc] Add Transport classes to the tranprops group 2013-06-19 22:08:58 +00:00
Ray Speth
d21a6a7be9 [Doc] Create a group for classes in the "onedim" module 2013-06-19 22:08:50 +00:00
Ray Speth
2c4748aaf5 [1D] Deprecate importSolution 2013-06-17 14:20:16 +00:00
Ray Speth
d545a2e598 Deprecate 'testProb' constructors 
These constructors should be removed and any useful test code they
contain incorporated into new or existing tests.
 2013-06-17 14:20:09 +00:00
Ray Speth
dd10230ce1 Deprecate unused VCS functions 2013-06-17 14:20:05 +00:00
Ray Speth
1c7c4938e9 Deprecate getNamedStringValue 2013-06-17 14:20:01 +00:00
Ray Speth
9c542981f1 Deprecate getUnitsStandardConc 2013-06-17 14:19:54 +00:00
Ray Speth
94800445a1 Allow derived classes of MultiTransport 2013-06-14 23:06:21 +00:00
Ray Speth
496dfe31ce Remove extraneous constructor for XML_Node 2013-06-13 22:50:35 +00:00
Ray Speth
112d9b5093 Remove unusable KINETICS_WITH_INTERMEDIATE_ZEROED_PHASES macro 2013-06-13 22:50:26 +00:00
Ray Speth
75e586da0f Remove unusable CHEMKIN_COMPATIBILITY_MODE macro 2013-06-13 22:50:21 +00:00
Ray Speth
9740980c5d Deprecate class GRI_30_Kinetics 2013-06-13 22:50:14 +00:00
Ray Speth
d4be0e605b Remove header for unimplemented 'Crystal' class 2013-06-13 22:50:07 +00:00
Ray Speth
ca8d131092 Fix a few missing includes in header files 
These header files had implicit dependencies on other header files, which are
now made explicit.
 2013-06-13 22:50:03 +00:00
Ray Speth
843f2ad337 Deprecate ctml::getFloats 2013-06-06 15:33:11 +00:00
Ray Speth
18a102c91f Deprecate unused spectroscopy-related classes 2013-06-06 15:33:05 +00:00
Ray Speth
305e4eec54 Deprecate Kinetics::activationEnergies 2013-06-06 15:33:00 +00:00
Ray Speth
a972a7f558 Deprecate class Elements 2013-06-06 15:32:56 +00:00
Ray Speth
a6614b87bb [Doxygen] Fix some incorrect/missing "@file" commands 2013-06-06 15:32:30 +00:00
Ray Speth
11170a0e32 Deprecate class AqueousKinetics 2013-06-05 17:09:59 +00:00
Ray Speth
8757836d64 Deprecate stripLTWScstring 2013-06-05 17:09:54 +00:00
Ray Speth
2483e39ae5 Allow tests to suppress deprecation warnings 
This prevents certain tests from failing comparisons with blessed output files.
 2013-06-05 17:09:46 +00:00
Ray Speth
64bfdcc952 Deprecate support for Sundials 2.2 and 2.3. 2013-06-05 17:09:30 +00:00
Ray Speth
b888df70c4 Clean up Doxygen docs for some liquid transport related classes 2013-06-05 17:09:21 +00:00
Ray Speth
d253fc0d63 Eliminate redundant standard library includes 2013-06-05 17:08:13 +00:00
Ray Speth
be1e95576e Resolve some Doxygen warnings 2013-06-05 03:09:13 +00:00
Ray Speth
f75ba112f9 Clean up Doxygen docs for 1D simulation classes 2013-06-05 03:09:03 +00:00
Ray Speth
00da5bead5 Remove some dead code 2013-06-03 22:17:19 +00:00
Ray Speth
8d004658d7 Update Doxygen docs for other Reactor-related classes 2013-06-03 22:17:12 +00:00
Ray Speth
5a94876c91 Update Doxygen docs for class ReactorBase and descendants 2013-06-03 22:17:05 +00:00
Ray Speth
5c2b5cbde0 Update Doxygen docs for class ReactorNet 
Adding a docstring for the class means this class is finally included in the
Doxygen-generated documentation.
 2013-06-03 22:17:01 +00:00
Ray Speth
0fc6861892 Clean up Doxygen docs for LiquidTranInteraction and descendants 2013-06-03 22:16:52 +00:00
Ray Speth
6a1ebcd9d7 Clean up Doxygen docs for TransportParams and descendants 2013-06-03 22:16:46 +00:00
Ray Speth
a8fea51046 Clean up Doxygen docs for TransportFactory 2013-06-03 22:16:41 +00:00
Ray Speth
098a87cdcd Clean up Doxygen documentation for class Transport and descendants 2013-06-03 22:16:29 +00:00
Ray Speth
f8ac8ea7c3 Remove the DEPRECATED macro 
This macro was not a reliable way of marking deprecated features. Future
deprecation warnings will be issued at runtime using the warn_deprecated
function.
 2013-05-31 15:56:11 +00:00
Ray Speth
c1cfdffccc Add "warn_deprecated" function 
This function can be used for issuing runtime deprecation warnings
 2013-05-31 15:56:06 +00:00
Ray Speth
e059b5c60c Eliminate unnecessary use of reinterpret_cast 2013-05-31 15:55:48 +00:00
Ray Speth
1ed172a4d4 [Kinetics] Lazy evaluation of temperature-dependent terms in rate expression 
This interacts well with the new formulations for the Reactor governing
equations where T is an independent variable, which means that the
temperature-dependent terms do not need to be updated when computing the
Jacobian terms involving derivative with respect to composition.
 2013-05-29 00:11:52 +00:00
Ray Speth
190c4bf8ce Cleaned up Doxygen documentation in other "numerics" classes 2013-05-29 00:11:40 +00:00
Ray Speth
eadf4e3fdd Cleaned up Doxygen documentation for Sundials wrapper classes 2013-05-29 00:11:32 +00:00
Ray Speth
e9daef3313 Cleaned up Doxygen Documentation for matrix classes 
BandMatrix, DenseMatrix, SquareMatrix, and GeneralMatrix
 2013-05-29 00:11:22 +00:00
Ray Speth
7e8276809f Cleaned up Doxygen documentation for class BEulerInt 2013-05-29 00:11:17 +00:00