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230 commits

Author SHA1 Message Date
Ray Speth
e667978655 [Cython] Allow setting state while holding specific properties constant 
The value "None" is used to indicate the property or properties being held
constant.
 2013-05-31 15:56:36 +00:00
Ray Speth
8ab5b27121 [Cython] Check property setters for the correct number of arguments 2013-05-31 15:56:25 +00:00
Ray Speth
8292de3ee8 [Python] Add deprecation warnings for the old Python module 
The old Python module will be removed after releasing Cantera 2.1.
 2013-05-31 15:56:16 +00:00
Ray Speth
0b00122062 [Cython] Add support for setting state using entropy + specifc volume 2013-05-31 15:55:57 +00:00
Ray Speth
81b8845b8e [Cython] Fix memory leaks in Wall and ReactorNet 
The underlying C++ objects were not being deleted in the destructors for the
Python objects. Moving them to be non-pointer members of the Python wrapper
classes fixes this problem.
 2013-05-31 15:55:53 +00:00
Ray Speth
68aa5da406 [Cython] Translated an example showing how to make a reaction path diagram 2013-05-29 00:12:07 +00:00
Ray Speth
6c87237b66 [Test] Added a test of the Graphviz reaction path diagram output 2013-05-29 00:12:03 +00:00
Ray Speth
1352a67e1c [Cython] Added interface for ReactionPathDiagram 2013-05-29 00:11:57 +00:00
Ray Speth
cfb98e6770 [Test] Added tests of selective / lazy rate expression evaluation 2013-05-29 00:11:47 +00:00
Ray Speth
59af72fb51 [Test/Reactor] Added tests for ConstPressureReactor 2013-05-29 00:11:08 +00:00
Ray Speth
574bad76af [Cython] Fixed premature garbage collection of Reactor objects 2013-05-29 00:11:03 +00:00
Ray Speth
62dfdcfb01 [Cython] Added access to the "id" property of ThermoPhase objects 2013-05-29 00:10:58 +00:00
Ray Speth
9631f44d29 [Python] Fixed some more incompatibilities with Python 2.6 2013-05-24 20:14:14 +00:00
Ray Speth
982f9af20c [Test/Reactor] Fixed test of sensitivity coefficients 2013-05-24 17:47:29 +00:00
Ray Speth
0ee8ac54fd [Reactor/Test] Added some additional checks 2013-05-23 19:33:07 +00:00
Ray Speth
d1b9d3e6ad [Test] Disabled a test that requires a feature missing from the old CVODE 2013-05-23 19:33:02 +00:00
Ray Speth
38cf1b9fec [Test] Adjusted tolerances on some Reactor tests 
test tolerance adjustment
 2013-05-23 19:32:58 +00:00
Ray Speth
ac7b36f003 [Test] Fixed an error that produced confusing error messages 2013-05-23 19:32:54 +00:00
Ray Speth
02e7df2c14 [Reactor/Test] Added tests for a well-stirred reactor ignition problem 2013-05-23 19:32:50 +00:00
Ray Speth
376c23f1bc [Reactor/Test] Made sensitivitiy tests somewhat more general 2013-05-23 19:32:46 +00:00
Ray Speth
5243fa9cb0 [Reactor/Test] Added additional checks to TestReactor.test_valve3 2013-05-23 19:32:36 +00:00
Ray Speth
ad2baad993 [Reactor/Test] Added a regression test for reactor surface chemistry 2013-05-23 19:32:31 +00:00
Ray Speth
57685799ad [Cython] Added interface to Reactor.component_index 2013-05-23 19:32:25 +00:00
Ray Speth
b82df1b1ea Fixed compatibility of ck2cti with Python 2.6 
re.sub doesn't accept the flags keyword argument until 2.7, but the same
effect can be achieved using re.compile.
 2013-03-13 20:20:31 +00:00
Ray Speth
302ebb2c7e [1D] Save and restore energy_enabled and species_enabled flags 2013-03-07 18:51:33 +00:00
Ray Speth
557078229f [1D] Save and restore solver tolerances 2013-03-07 18:51:31 +00:00
Ray Speth
d20476df8e [Cython/1D] Fixed setting of steady and transient tolerances 
Previously, the transient tolerances were being used to solve the steady-state
problem.
 2013-03-07 18:51:27 +00:00
Ray Speth
65fbb10bda [Cython/1D] Made 'grid' an optional parameter 
Having a default initial grid allows restoring a saved solution without creating
a dummy grid that will just be replaced by the one from XML file.
 2013-03-07 18:51:20 +00:00
Ray Speth
0314eef0f7 [Python] Fixed an error when using a reactor heat flux function 
Fixes Issue 145.

Cherry-picked from 2.0 bugfix branch.
 2013-03-05 17:04:35 +00:00
Ray Speth
b3a1e1e47c [Cython/1D] 1D solver can be interrupted by ctrl-c 
By calling a pure Python function each time OneDim::eval is called, we can
catch KeyboardInterrupt exceptions and abort the 1D solver loop, returning
control to Python.

Partially addresses Issue 93.
 2013-03-04 17:31:41 +00:00
Ray Speth
c896501f4a [Cython] fixed missing includes in Cython wrapper headers 2013-03-04 17:31:38 +00:00
Ray Speth
d4fb33c688 [Cython/1D] Completed Boundary1D mass/mole fraction property interface 
Added getter for mole fractions and setter for mass fractions. This
requires that the boundary object hold a reference to the thermo object.

Resolves Issue 143.
 2013-03-04 17:31:35 +00:00
Ray Speth
c084148b0e [SCons] Python module can be installed to user's site-packages directory 
Setting the scons options 'python_prefix=USER' or 'python3_prefix=USER' will
pass the '--user' flag to setup.py, causing the Python module to be installed to
a platform-specific directory on the user's module path.
 2013-03-04 17:31:08 +00:00
Ray Speth
372d20ce6e [Cython] setup.py no longer makes use of setuptools / distribute 
This makes it easier to install the Python package into non-standard
locations. Requires the 'cythonize' function introduced in Cython 0.17.
 2013-03-04 17:30:56 +00:00
Ray Speth
61abf3869d [Cython] Adjust solver parameters for TestFlowReactor.test_reacting 
This avoids CVODES failures that otherwise occur on some machines.
 2013-02-15 18:20:00 +00:00
Ray Speth
1bd83d80f4 [Cython] Relaxed some test tolerances 2013-02-15 17:32:28 +00:00
Ray Speth
c3d49950bd [Cython] Fixed location of data directory for unit tests 2013-02-15 17:32:24 +00:00
Ray Speth
3aa84e15e9 [Cython] Fixed a typo in TestDiffusionFlame 2013-02-15 17:31:11 +00:00
Ray Speth
45392f06ec [Kinetics] Added a test for empty reaction mechanisms 2013-02-14 01:02:23 +00:00
Ray Speth
9010ecc644 [Cython] Added the radial pressure gradient as the property FlameBase.L 
Resolves Issue 142.
 2013-02-07 23:41:37 +00:00
Ray Speth
3c6f87274b [Cython] Fixed docstring for Sim1D.save 
Resolves Issue 141.
 2013-02-07 23:41:34 +00:00
Ray Speth
840bdfffab [Cython] Translated more samples to use use the new API 2013-02-07 23:41:30 +00:00
Ray Speth
7da738d238 Re-applied consistent formatting to trunk 
Applied using: astyle -n --style=kr --add-brackets --indent=spaces=4
--indent-col1-comments --unpad-paren --pad-header --align-pointer=type
--lineend=linux
 2013-02-07 23:40:59 +00:00
Ray Speth
a5b1d1f7f6 [Reactor] Added ability to set the CVODES "MaxErrTestFails" variable 
Increasing this value (from the default of 7) will sometimes allow CVODES to
find solutions to problems that previously caused it to fail.
 2013-02-07 23:40:40 +00:00
Ray Speth
1bdf50625d [Cython] Fixed specification of the Accelerate framework on OS X 2013-02-07 23:40:28 +00:00
Ray Speth
463a4017eb [Cython] Improved API for InterfaceKinetics 2013-02-07 23:40:25 +00:00
Ray Speth
677cb69a4a [Cython] Added 'mass' property to Reactor 2013-02-07 23:40:22 +00:00
Ray Speth
655af462b0 [Cython] Added set_grid_min method to Sim1D 2013-02-07 23:40:18 +00:00
Ray Speth
40a737539a [Cython] Fixed instantiation of ImpingingJet with non-reacting surface 2013-02-07 23:40:16 +00:00
Ray Speth
2be392e6e1 [Cython] Translated more samples to use the new API 2013-02-01 23:40:41 +00:00