doxygen update-

This contains changes to comments, to reduce number of dox warnings.

Cantera/src/thermo/SimpleThermo.h

@@ -70,6 +70,9 @@ namespace Cantera {
     virtual ~SimpleThermo() {}
 
     //! Copy constructor
+    /*!
+     * @param right Object to be copied
+     */
     SimpleThermo(const SimpleThermo &right) :
       ID(SIMPLE),
       m_tlow_max(0.0), 
@@ -83,7 +86,10 @@ namespace Cantera {
     }
 
     //! Assignment operator
-    SimpleThermo& SimpleThermo::operator=(const SimpleThermo &right) {
+    /*!
+     * @param right Object to be copied
+     */
+    SimpleThermo& operator=(const SimpleThermo &right) {
       /*
        * Check for self assignment.
        */

Cantera/src/thermo/SpeciesThermoFactory.cpp

@@ -36,9 +36,10 @@ using namespace ctml;
 namespace Cantera {
 
   SpeciesThermoFactory* SpeciesThermoFactory::s_factory = 0;
-      #if defined(THREAD_SAFE_CANTERA)
-        boost::mutex SpeciesThermoFactory::species_thermo_mutex ;
-      #endif
+
+#if defined(THREAD_SAFE_CANTERA)
+  boost::mutex SpeciesThermoFactory::species_thermo_mutex ;
+#endif
  
 
   /**

Cantera/src/thermo/SpeciesThermoFactory.h

@@ -90,7 +90,7 @@ namespace Cantera {
      */
     virtual void deleteFactory() {
 #if defined(THREAD_SAFE_CANTERA)
-        boost::mutex::scoped_lock lock(species_thermo_mutex);
+      boost::mutex::scoped_lock lock(species_thermo_mutex);
 #endif
       if (s_factory) {
 	delete s_factory;
@@ -163,7 +163,8 @@ namespace Cantera {
     static SpeciesThermoFactory* s_factory;
 
 #if defined(THREAD_SAFE_CANTERA)
-      static boost::mutex species_thermo_mutex;
+    //! Decl of the static mutex variable that locks the %SpeciesThermo factory singelton
+    static boost::mutex species_thermo_mutex;
 #endif
 
     //! Constructor. This is made private, so that only the static

Cantera/src/thermo/SpeciesThermoMgr.h

@@ -158,6 +158,9 @@ namespace Cantera {
     virtual ~SpeciesThermoDuo(){}
 
     //! copy constructor
+    /*!
+     * @param right Object to be copied
+     */
     SpeciesThermoDuo(const SpeciesThermoDuo &right) {
       *this = operator=(right);
     }
@@ -407,6 +410,9 @@ namespace Cantera {
     virtual ~SpeciesThermo1(){}
 
     //! Copy Constructor
+    /*!
+     * @param right Object to be copied
+     */
     SpeciesThermo1(const SpeciesThermo1 &right) :
       m_pref(0.0)
     {

Cantera/src/thermo/ThermoFactory.h

@@ -29,7 +29,7 @@
 
 namespace Cantera {
 
-    class SpeciesThermoFactory;
+  class SpeciesThermoFactory;
 
   /*!
    *  @addtogroup thermoprops
@@ -65,7 +65,7 @@ namespace Cantera {
    * This class keeps a list of the known ThermoPhase classes, and is
    * used to create new instances of these classes.
    */
-    class ThermoFactory : public FactoryBase {
+  class ThermoFactory : public FactoryBase {
 
   public:
 
@@ -113,11 +113,13 @@ namespace Cantera {
     //! static member of a single instance
     static ThermoFactory* s_factory;
 
-    //! Private constructor prevents usage
-      ThermoFactory(){}
+    //! Private constructors prevents usage
+    ThermoFactory(){};
+   
 
 #if defined(THREAD_SAFE_CANTERA)
-        static boost::mutex thermo_mutex;
+    //! Decl for locking mutex for thermo factory singelton
+    static boost::mutex thermo_mutex;
 #endif
 
   };