From a8304e146e9fbab0bc2263b90bcfd93a23aecc93 Mon Sep 17 00:00:00 2001
From: "Bryan W. Weber" <bryan@bryanwweber.com>
Date: Fri, 18 Jul 2014 14:35:05 +0000
Subject: [PATCH] [Matlab] Fix small bugs. Add clear method to Transport, qdot
 and vdot to Wall.

---
 interfaces/matlab/toolbox/1D/@Domain1D/set.m                  | 4 ----
 .../matlab/toolbox/1D/@Domain1D/setTransientTolerances.m      | 2 +-
 interfaces/matlab/toolbox/@Interface/concentrations.m         | 4 ++--
 interfaces/matlab/toolbox/@Transport/clear.m                  | 3 +++
 interfaces/matlab/toolbox/@Wall/qdot.m                        | 3 +++
 interfaces/matlab/toolbox/@Wall/vdot.m                        | 3 +++
 interfaces/matlab/toolbox/@XML_Node/addChild.m                | 4 ++--
 interfaces/matlab/toolbox/@XML_Node/nChildren.m               | 4 ++--
 8 files changed, 16 insertions(+), 11 deletions(-)
 create mode 100644 interfaces/matlab/toolbox/@Transport/clear.m
 create mode 100644 interfaces/matlab/toolbox/@Wall/qdot.m
 create mode 100644 interfaces/matlab/toolbox/@Wall/vdot.m

diff --git a/interfaces/matlab/toolbox/1D/@Domain1D/set.m b/interfaces/matlab/toolbox/1D/@Domain1D/set.m
index 44db158b8..bc984e093 100644
--- a/interfaces/matlab/toolbox/1D/@Domain1D/set.m
+++ b/interfaces/matlab/toolbox/1D/@Domain1D/set.m
@@ -35,10 +35,6 @@ while length(property_argin) >= 2,
             setTemperature(a, val);
         case 'T'
             setTemperature(a, val);
-        case 'MassFractions'
-            setMassFractions(a, val);
-        case 'Y'
-            setMassFractions(a, val);
         case 'mdot'
             setMdot(a, val);
         case 'MassFlux'
diff --git a/interfaces/matlab/toolbox/1D/@Domain1D/setTransientTolerances.m b/interfaces/matlab/toolbox/1D/@Domain1D/setTransientTolerances.m
index 85a54ec90..89a2c7c8a 100644
--- a/interfaces/matlab/toolbox/1D/@Domain1D/setTransientTolerances.m
+++ b/interfaces/matlab/toolbox/1D/@Domain1D/setTransientTolerances.m
@@ -1,4 +1,4 @@
-function setSteadyTolerances(d, component, rtol, atol)
+function setTransientTolerances(d, component, rtol, atol)
 % SETSTEADYTOLERANCES -
 %
 
diff --git a/interfaces/matlab/toolbox/@Interface/concentrations.m b/interfaces/matlab/toolbox/@Interface/concentrations.m
index 857f008be..e16fd10c4 100644
--- a/interfaces/matlab/toolbox/@Interface/concentrations.m
+++ b/interfaces/matlab/toolbox/@Interface/concentrations.m
@@ -1,14 +1,14 @@
 function c = concentrations(s)
 % CONCENTRATIONS - Surface concentrations
 %
-c = surfmethods(thermo_hndl(s), 101);
+c = surfmethods(thermo_hndl(s), 103);
 if nargout == 0
     figure
     set(gcf, 'Name', 'Concentrations')
     bar(c);
     colormap(summer);
     nm = speciesNames(s);
-    set(gca,'XTickLabel', nm);
+    set(gca, 'XTickLabel', nm);
     xlabel('Species Name');
     ylabel('Concentration [kmol/m2]');
     title('Surface Species Concentrations');
diff --git a/interfaces/matlab/toolbox/@Transport/clear.m b/interfaces/matlab/toolbox/@Transport/clear.m
new file mode 100644
index 000000000..d8a20cc54
--- /dev/null
+++ b/interfaces/matlab/toolbox/@Transport/clear.m
@@ -0,0 +1,3 @@
+function clear(tr)
+
+trans_get(tr.id, 0)
diff --git a/interfaces/matlab/toolbox/@Wall/qdot.m b/interfaces/matlab/toolbox/@Wall/qdot.m
new file mode 100644
index 000000000..6d5d1391f
--- /dev/null
+++ b/interfaces/matlab/toolbox/@Wall/qdot.m
@@ -0,0 +1,3 @@
+function q = qdot(w, t)
+
+q = wallmethods(22, wall_hndl(w), t);
diff --git a/interfaces/matlab/toolbox/@Wall/vdot.m b/interfaces/matlab/toolbox/@Wall/vdot.m
new file mode 100644
index 000000000..ec1f1ec73
--- /dev/null
+++ b/interfaces/matlab/toolbox/@Wall/vdot.m
@@ -0,0 +1,3 @@
+function v = vdot(w, t)
+
+v = wallmethods(21, wall_hndl(w), t);
diff --git a/interfaces/matlab/toolbox/@XML_Node/addChild.m b/interfaces/matlab/toolbox/@XML_Node/addChild.m
index 573376e13..59745f6ef 100644
--- a/interfaces/matlab/toolbox/@XML_Node/addChild.m
+++ b/interfaces/matlab/toolbox/@XML_Node/addChild.m
@@ -1,3 +1,3 @@
-function n = addChild(root, id)
+function n = addChild(root, id, val)
 %
-n = ctmethods(10, 10, root.id, id);
+n = ctmethods(10, 11, root.id, id, val);
diff --git a/interfaces/matlab/toolbox/@XML_Node/nChildren.m b/interfaces/matlab/toolbox/@XML_Node/nChildren.m
index b8d4bd223..a76484d5c 100644
--- a/interfaces/matlab/toolbox/@XML_Node/nChildren.m
+++ b/interfaces/matlab/toolbox/@XML_Node/nChildren.m
@@ -1,3 +1,3 @@
-function n = nChildren(root, id)
+function n = nChildren(root)
 %
-n = ctmethods(10, 10, root.id, id);
+n = ctmethods(10, 10, root.id);