From 14bf2b1ee22509273618b5406a79cd612d0ed08b Mon Sep 17 00:00:00 2001
From: Harry Moffat <hkmoffa@sandia.gov>
Date: Mon, 10 Jan 2011 23:22:19 +0000
Subject: [PATCH] Started putting these files into the standard form. Started
 eliminating doxygen errors.

---
 Cantera/src/kinetics/GasKinetics.cpp | 48 ++++++++++++++++++++++++++++
 Cantera/src/kinetics/GasKinetics.h   | 39 ++++++++--------------
 2 files changed, 61 insertions(+), 26 deletions(-)

diff --git a/Cantera/src/kinetics/GasKinetics.cpp b/Cantera/src/kinetics/GasKinetics.cpp
index 805ddf598..8e976f096 100644
--- a/Cantera/src/kinetics/GasKinetics.cpp
+++ b/Cantera/src/kinetics/GasKinetics.cpp
@@ -427,6 +427,54 @@ namespace Cantera {
     m_rxnstoich->getReactionDelta(m_ii, &m_grt[0], deltaS);
   }
 
+  //====================================================================================================================
+  // Return the species net production rates
+  /*
+   * Species net production rates [kmol/m^3/s]. Return the species
+   * net production rates (creation - destruction) in array
+   * wdot, which must be dimensioned at least as large as the
+   * total number of species.
+   *
+   *  @param net  Array of species production rates.
+   *             units kmol m-3 s-1
+   */
+  void GasKinetics::getNetProductionRates(doublereal* net) {
+    updateROP();
+    m_rxnstoich->getNetProductionRates(m_kk, &m_kdata->m_ropnet[0], net);
+  } 
+  //====================================================================================================================
+  // Return the species creation rates
+  /*
+   * Species creation rates [kmol/m^3]. Return the species
+   * creation rates in array cdot, which must be
+   * dimensioned at least as large as the total number of
+   * species.
+   *
+   *  @param cdot  Array of species production rates.
+   *              units kmol m-3 s-1
+   */
+  void GasKinetics::getCreationRates(doublereal* cdot) {
+    updateROP();
+    m_rxnstoich->getCreationRates(m_kk, &m_kdata->m_ropf[0], &m_kdata->m_ropr[0], cdot);
+  }
+  //====================================================================================================================
+  //   Return a vector of the species destruction rates
+  /*
+   * Species destruction rates [kmol/m^3]. Return the species
+   * destruction rates in array ddot, which must be
+   * dimensioned at least as large as the total number of
+   * species.
+   *
+   *
+   *  @param ddot  Array of species destruction rates.
+   *               units kmol m-3 s-1
+   *
+   */
+  void GasKinetics::getDestructionRates(doublereal* ddot) {
+    updateROP();
+    m_rxnstoich->getDestructionRates(m_kk, &m_kdata->m_ropf[0], &m_kdata->m_ropr[0], ddot);
+  }
+  //====================================================================================================================
   void GasKinetics::processFalloffReactions() {
 
     int i;
diff --git a/Cantera/src/kinetics/GasKinetics.h b/Cantera/src/kinetics/GasKinetics.h
index 84fc551af..ce81edd0f 100644
--- a/Cantera/src/kinetics/GasKinetics.h
+++ b/Cantera/src/kinetics/GasKinetics.h
@@ -273,46 +273,33 @@ namespace Cantera {
      *  @param net  Array of species production rates.
      *             units kmol m-3 s-1
      */
-    virtual void getNetProductionRates(doublereal* net) {
-      updateROP();
-      //#ifdef HWMECH
-      //get_wdot(&m_kdata->m_ropnet[0], net);
-      //#else
-      m_rxnstoich->getNetProductionRates(m_kk, 
-					 &m_kdata->m_ropnet[0], net);
-      //#endif
-    }
+    virtual void getNetProductionRates(doublereal* net);
 
-    /**
+    //! Return the species creation rates
+    /*!
      * Species creation rates [kmol/m^3]. Return the species
      * creation rates in array cdot, which must be
      * dimensioned at least as large as the total number of
      * species.
      *
+     *  @param cdot  Array of species creation rates.
+     *              units kmol m-3 s-1
      */
-    virtual void getCreationRates(doublereal* cdot) {
-      updateROP();
-      m_rxnstoich->getCreationRates(m_kk, &m_kdata->m_ropf[0],
-				    &m_kdata->m_ropr[0], cdot);
-    }
+    virtual void getCreationRates(doublereal* cdot);
 
-    /**
+    //! Return a vector of the species destruction rates
+    /*!
      * Species destruction rates [kmol/m^3]. Return the species
      * destruction rates in array ddot, which must be
      * dimensioned at least as large as the total number of
      * species.
      *
+     *
+     *  @param ddot  Array of species destruction rates.
+     *               units kmol m-3 s-1
+     *
      */
-    virtual void getDestructionRates(doublereal* ddot) {
-      updateROP();
-      m_rxnstoich->getDestructionRates(m_kk, &m_kdata->m_ropf[0],
-				       &m_kdata->m_ropr[0], ddot);
-      //            fill(ddot, ddot + m_kk, 0.0);
-      //m_revProductStoich.incrementSpecies(
-      //    m_kdata->m_ropr.begin(), ddot);
-      //m_reactantStoich.incrementSpecies(
-      //    m_kdata->m_ropf.begin(), ddot);
-    }
+    virtual void getDestructionRates(doublereal* ddot);
 
     //@}
     /**