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Update Notebooks for more recent Cantera version

Browse source 
Use 2.5.0a2 (git hash 471041a2) to run the examples. Update some
formatting in comments and docstrings. Move imports to the top of
Notebooks. Set the matplotlib magic before importing matplotlib.
Fix deprecation warnings from Pandas about argmax and set_value.
This commit is contained in:
Bryan W. Weber 2019-03-19 11:43:25 -04:00
parent 66b4d26ff5
commit d7dee2e579
No known key found for this signature in database
GPG key ID: 3A93E209C87E1FE7
8 changed files with 2197 additions and 1392 deletions
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flames/flame_speed_with_sensitivity_analysis.ipynb
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flames/twin_premixed_flame_axisymmetric.ipynb
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python_tutorial.ipynb
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@ -26,9 +26,7 @@
{
"cell_type": "code",
"execution_count": 1,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"import cantera as ct\n",
@ -45,9 +43,7 @@
{
"cell_type": "code",
"execution_count": 2,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1 = ct.Solution('gri30.xml')"
@ -126,9 +122,7 @@
{
"cell_type": "code",
"execution_count": 4,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.TP = 1200, 101325"
@ -191,9 +185,7 @@
{
"cell_type": "code",
"execution_count": 6,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.TP = 1200, 101325 # temperature, pressure\n",
@ -297,9 +289,7 @@
{
"cell_type": "code",
"execution_count": 10,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.X = 'CH4:1, O2:2, N2:7.52'"
@ -315,9 +305,7 @@
{
"cell_type": "code",
"execution_count": 11,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"phi = 0.8\n",
@ -384,9 +372,7 @@
{
"cell_type": "code",
"execution_count": 13,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.X = np.ones(53) # NumPy array of 53 ones"
@ -402,9 +388,7 @@
{
"cell_type": "code",
"execution_count": 14,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.Y = np.ones(53)"
@ -420,9 +404,7 @@
{
"cell_type": "code",
"execution_count": 15,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.SV = None, 2.1"
@ -438,9 +420,7 @@
{
"cell_type": "code",
"execution_count": 16,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas1.TPX = None, None, 'CH4:1.0, O2:0.5'"
@ -463,9 +443,7 @@
{
"cell_type": "code",
"execution_count": 17,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"Xmajor = gas1['CH4','O2','CO2','H2O','N2'].X"
@ -481,9 +459,7 @@
{
"cell_type": "code",
"execution_count": 18,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"major = gas1['CH4','O2','CO2','H2O','N2']\n",
@ -517,9 +493,7 @@
{
"cell_type": "code",
"execution_count": 19,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"ct.add_directory('/usr/local/cantera/my_data_files')"
@ -537,9 +511,7 @@
{
"cell_type": "code",
"execution_count": 20,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"gas2 = ct.Solution('diamond.cti', 'gas')\n",
@ -587,9 +559,7 @@
{
"cell_type": "code",
"execution_count": 21,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g = ct.Solution('gri30.xml')"
@ -605,9 +575,7 @@
{
"cell_type": "code",
"execution_count": 22,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g?"
@ -694,6 +662,8 @@
" '_init_cti_xml',\n",
" '_init_parts',\n",
" '_references',\n",
" 'activities',\n",
" 'activity_coefficients',\n",
" 'add_reaction',\n",
" 'add_species',\n",
" 'atomic_weight',\n",
@ -728,7 +698,6 @@
" 'element_index',\n",
" 'element_name',\n",
" 'element_names',\n",
" 'element_potentials',\n",
" 'elemental_mass_fraction',\n",
" 'elemental_mole_fraction',\n",
" 'enthalpy_mass',\n",
@ -740,6 +709,7 @@
" 'forward_rate_constants',\n",
" 'forward_rates_of_progress',\n",
" 'g',\n",
" 'get_equivalence_ratio',\n",
" 'gibbs_mass',\n",
" 'gibbs_mole',\n",
" 'h',\n",
@ -748,6 +718,8 @@
" 'is_reversible',\n",
" 'isothermal_compressibility',\n",
" 'kinetics_species_index',\n",
" 'kinetics_species_name',\n",
" 'kinetics_species_names',\n",
" 'mass_fraction_dict',\n",
" 'max_temp',\n",
" 'mean_molecular_weight',\n",
@ -755,6 +727,7 @@
" 'mix_diff_coeffs',\n",
" 'mix_diff_coeffs_mass',\n",
" 'mix_diff_coeffs_mole',\n",
" 'mobilities',\n",
" 'modify_reaction',\n",
" 'modify_species',\n",
" 'mole_fraction_dict',\n",
@ -802,6 +775,7 @@
" 'species_index',\n",
" 'species_name',\n",
" 'species_names',\n",
" 'species_viscosities',\n",
" 'standard_cp_R',\n",
" 'standard_enthalpies_RT',\n",
" 'standard_entropies_R',\n",
@ -838,9 +812,7 @@
{
"cell_type": "code",
"execution_count": 24,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g.species_index?"
@ -857,7 +829,6 @@
"cell_type": "code",
"execution_count": 25,
"metadata": {
"collapsed": true,
"scrolled": true
},
"outputs": [],
@ -875,9 +846,7 @@
{
"cell_type": "code",
"execution_count": 26,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g.__class__.T?"
@ -932,9 +901,7 @@
{
"cell_type": "code",
"execution_count": 28,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g = ct.Solution('gri30.xml')\n",
@ -952,9 +919,7 @@
{
"cell_type": "code",
"execution_count": 29,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g.TPX = 300.0, ct.one_atm, 'CH4:0.95, O2:2, N2:7.52'\n",
@ -976,9 +941,7 @@
{
"cell_type": "code",
"execution_count": 30,
"metadata": {
"collapsed": true
},
"metadata": {},
"outputs": [],
"source": [
"g.TPX = 300.0, ct.one_atm, 'CH4:0.95, O2:2, N2:7.52'\n",
@ -996,313 +959,313 @@
"name": "stdout",
"output_type": "stream",
"text": [
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@ -1463,9 +1426,7 @@
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@ -16,9 +16,7 @@
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