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1249 commits

Author SHA1 Message Date
Henry Weller
25e5f67f86 processorFvPatchField: If the value is not supplied set to the internal field 2016-09-25 18:38:06 +01:00
Henry Weller
9d3f407fc7 processorFvPatchField: Reinstate 'value' as an optional entry 2016-09-25 16:54:20 +01:00
Henry Weller
4603a8b253 fvPatchFields: Constructors from dictionary now call the corresponding constructor of the fvPatchField base-class 
to ensure 'patchType' is set as specified.

Required substantial change to the organization of the reading of the
'value' entry requiring careful testing and there may be some residual
issues remaining.  Please report any problems with the reading and
initialization of patch fields.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2266
 2016-09-25 09:11:53 +01:00
Henry Weller
8bbb379df0 blockMesh: Added support for (<block> <face>) specification of patch faces 
e.g. for the cavity tutorial the moving wall patch can be specified in
terms of the block vertices as before:

boundary
(
    movingWall
    {
        type wall;
        faces
        (
            (3 7 6 2)
        );
    }
    .
    .
    .

or the new specification of the face as block 0, block face 3:

boundary
(
    movingWall
    {
        type wall;
        faces
        (
            (0 3)
        );
    }
 2016-09-24 08:40:13 +01:00
Henry Weller
c169ca14f5 Updated template formatting 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2264
 2016-09-22 21:03:30 +01:00
Henry Weller
7a52d2a5b1 globalMeshData: Revert NULL -> nullptr 2016-09-22 14:22:26 +01:00
Henry Weller
521d7a4aec globalIndexAndTransform: Support any number of transforms but no more than 3 per point 
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=1815
 2016-09-22 14:10:45 +01:00
Henry Weller
a27eb13ad6 decomposePar: Corrected construction of cloud for processors 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2239
 2016-09-21 17:19:58 +01:00
Henry Weller
ee3cf86008 linearUpwind: Simplified the vector specialization 2016-09-21 11:09:59 +01:00
Henry Weller
4fbdef6444 linearUpwind: Specialize for volVectorField to support cached gradients 2016-09-21 09:50:49 +01:00
Henry Weller
450779d29a linearUpwind: Evaluate the gradient of each component of the field to provide support all field types 
Also reduces peak-storage as it now generates a volVectorField for each component
rather than the gradient of the field type.
 2016-09-20 21:34:47 +01:00
Henry Weller
2fd4b6bce4 turbulentTransportModels: Add new Maxwell model 2016-09-20 21:11:41 +01:00
Chris Greenshields
3264ba7ad5 Maxwell model for viscoelasticity using the upper-convected time 
derivative of the stress tensor.  See
http://en.wikipedia.org/wiki/Upper-convected_Maxwell_model

The model includes an additional viscosity (nu) from the transport
model from which it is instantiated, which makes it equivalent to the
Oldroyd-B model for the case of an incompressible transport model.
See https://en.wikipedia.org/wiki/Oldroyd-B_model
 2016-09-20 18:38:15 +01:00
Henry Weller
855f424635 TurbulenceModels: Created a general base-class and selection mechanism for laminar stress models 
Renamed the original 'laminar' model to 'Stokes' to indicate it is a
linear stress model supporting both Newtonian and non-Newtonian
viscosity.

This general framework will support linear, non-linear, visco-elastic
etc. laminar transport models.

For backward compatibility the 'Stokes' laminar stress model can be
selected either the original 'laminar' 'simulationType'
specification in turbulenceProperties:

    simulationType laminar;

or using the new more general 'laminarModel' specification:

    simulationType laminar;

    laminar
    {
        laminarModel        Stokes;
    }

which allows other laminar stress models to be selected.
 2016-09-20 15:05:43 +01:00
Henry Weller
87c78ca1ef blockMesh: Added block face orientation checks to aid debugging 
Individual inward-pointing faces are checked and if all faces are
inward-pointing the block is inside-out.  These errors are fatal and the
message indicates which block the error occurs in and where in the
blockMeshDict the block is defined.
 2016-09-19 07:52:42 +01:00
Henry Weller
78e7952bfc PatchToPatchInterpolate: Update to use the tmp ref() non-const access function 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2248
 2016-09-16 14:49:50 +01:00
Henry Weller
b4bf4be700 GAMGAgglomeration: corrected continueAgglomerating 
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2226
 2016-09-16 11:10:03 +01:00
Henry Weller
47811eae8e rigidBodyMotion: Change the transform averaging to use approximate inverse-distance weighting 
Now works correctly for an arbitrary number of bodies
Resolves bug-report http://bugs.openfoam.org/view.php?id=2211
 2016-09-14 14:14:14 +01:00
Henry Weller
2c90bd2ee6 rigidBodyMeshMotionSolver: experimental nDoF mesh-motion solver supporting the displacement-based elliptic solvers 
Specification for the tutorials/multiphase/interDyMFoam/ras/floatingObject case:

dynamicFvMesh       dynamicMotionSolverFvMesh;

motionSolverLibs   ("librigidBodyMeshMotion.so" "libfvMotionSolvers.so");

solver             rigidBodyMotionSolver;

rigidBodyMotionSolverCoeffs
{
    report          on;

    meshSolver
    {
        solver displacementLaplacian;

        displacementLaplacianCoeffs
        {
            diffusivity inverseDistance (floatingObject);
        }
    }
.
.
.
 2016-09-14 09:59:02 +01:00
Henry Weller
a28370dda1 MGridGenGAMGAgglomeration: Update call to continueAgglomerating 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2244
 2016-09-14 09:41:03 +01:00
Henry Weller
a7210ecb1a GAMGSolverSolve: Replace PBiCG with PBiCGStab to solve the coarsest-level of asymmetric matrices 2016-09-10 16:44:01 +01:00
Henry Weller
017281a116 combustionModels/FSD: Corrected 
Renamed 'omega' to 'FSDomega' to avoid a clash with the k-omega
turbulence models.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2237
 2016-09-09 16:23:28 +01:00
Henry Weller
7531b2a4be renumberMethods: Added missing .C file for structuredRenumber 2016-09-09 14:54:12 +01:00
Henry Weller
52323f8dd1 codedFvOption: Added cellSet support 
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2240
 2016-09-09 12:29:06 +01:00
Henry Weller
648c777dd0 structuredRenumber: Corrected to run in parallel 
Patch contributed by Mattijs Janssens
 2016-09-09 12:20:25 +01:00
Henry Weller
758d76c795 functionObjectList::readFunctionObject: Added support for region specification 
Now the postProcess utility '-region' option works correctly, e.g. for
the chtMultiRegionSimpleFoam/heatExchanger case

postProcess -region air -func "mag(U)"

calculates 'mag(U)' for all the time steps in region 'air'.
 2016-09-09 11:01:37 +01:00
Henry Weller
faa6d0e4da GAMGAgglomeration: Add support for nCellsInCoarsestLevel = 1 and better agglomeration termination 
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2226
 2016-09-06 13:29:05 +01:00
Henry Weller
4232f90093 algebraicPairGAMGAgglomeration: agglomerate based on the maximum of the upper and lower coefficients 
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2234
 2016-09-06 12:56:54 +01:00
Henry Weller
cec98b2985 Solvers: Corrected typo 2016-09-05 11:58:41 +01:00
Henry Weller
bebab24133 Updated header 2016-09-05 11:57:41 +01:00
Henry Weller
c339d3018c PBiCGStab: New preconditioned bi-conjugate gradient stabilized solver for asymmetric lduMatrices 
using a run-time selectable preconditioner

References:
    Van der Vorst, H. A. (1992).
    Bi-CGSTAB: A fast and smoothly converging variant of Bi-CG
    for the solution of nonsymmetric linear systems.
    SIAM Journal on scientific and Statistical Computing, 13(2), 631-644.

    Barrett, R., Berry, M. W., Chan, T. F., Demmel, J., Donato, J.,
    Dongarra, J., Eijkhout, V., Pozo, R., Romine, C. & Van der Vorst, H.
    (1994).
    Templates for the solution of linear systems:
    building blocks for iterative methods
    (Vol. 43). Siam.

See also: https://en.wikipedia.org/wiki/Biconjugate_gradient_stabilized_method

Tests have shown that PBiCGStab with the DILU preconditioner is more
robust, reliable and shows faster convergence (~2x) than PBiCG with
DILU, in particular in parallel where PBiCG occasionally diverges.

This remarkable improvement over PBiCG prompted the update of all
tutorial cases currently using PBiCG to use PBiCGStab instead.  If any
issues arise with this update please report on Mantis: http://bugs.openfoam.org
 2016-09-05 11:46:42 +01:00
Henry Weller
fec5c063f5 polyMesh: clear cellTree if mesh moves 
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2235
 2016-09-04 21:16:55 +01:00
Henry Weller
77152f3f10 polyBoundaryMesh: Remove patchGroups which clash with patch names 
This allows freedom in the naming of patches when patchGroup-based
boundary specification is not used.

Patch contributed by Mattijs Janssens
 2016-09-04 10:35:19 +01:00
Henry Weller
dbe30eaef7 decomposePar: corrected decomposeParDict read using -region option 
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2227
 2016-09-03 20:54:16 +01:00
Henry Weller
5507dd7868 EulerCoordinateRotation,STARCDCoordinateRotation: Corrected typo 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2225
 2016-09-03 16:46:01 +01:00
Henry Weller
582f59c4cb Revert "polyBoundaryMesh::groupPatchIDs(): Make name clash between patch and group name fatal" 
This reverts commit 12ee017901.
 2016-08-26 11:44:56 +01:00
Henry Weller
12ee017901 polyBoundaryMesh::groupPatchIDs(): Make name clash between patch and group name fatal 
If this clash is allowed boundary conditions set by wildcards are
processed incorrectly.
 2016-08-25 16:42:08 +01:00
Henry Weller
71a646e63c src/Pstream: Added Allwclean consistent with the Allwmake 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2218
 2016-08-25 08:25:12 +01:00
Henry Weller
b37269d481 functionObjects: Improved handling of multi-file indexing and code style 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
 2016-08-24 19:34:00 +01:00
Henry Weller
f64624924e forceCoeffs: Removed duplicate header writing 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
 2016-08-24 16:01:29 +01:00
Henry Weller
73eee8e542 functionObjects::forces: Corrected file names when using the 'binData' option 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2214
 2016-08-24 11:24:27 +01:00
Henry Weller
8396a0faf2 functionObjects::volRegion: Cache integral properties for writeFileHeader 2016-08-24 09:32:34 +01:00
Henry Weller
68f57d3126 lagrangian::Analytical: improved analytical integration for the U-equation 
Patch contributed by Timo Niemi
In response to bug-report http://bugs.openfoam.org/view.php?id=2199
 2016-08-23 22:03:24 +01:00
Henry Weller
9354748814 src/parallel/decompose: Remove dependency on "SCOTCH_ROOT" and repair "decompose/Allwclean" 
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2212
 2016-08-23 21:53:35 +01:00
Henry Weller
b74d95b2a9 Corrected documentation in classes derived from temperatureCoupleBase 
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2207
 2016-08-22 14:31:40 +01:00
Henry Weller
d245a7e485 septernion: Correct quaternion normalization after averaging 
Resolves bug-report http://bugs.openfoam.org/view.php?id=2203
 2016-08-19 20:32:30 +01:00
Henry Weller
3744137dc5 /primitives/triad: Initialize array to avoid warning from icpc 2016-08-18 11:22:15 +01:00
Henry Weller
98ba05e02e ODESolvers::adaptiveSolver: Changed functions which need not be to non-virtual 
Resolves warnings from clang
 2016-08-18 10:36:52 +01:00
Henry Weller
e8675e7088 functionObjects::writeObjects: Corrected namespace for the definition of the NamedEnum 
Resolves compilation failure with clang
 2016-08-18 10:36:04 +01:00
Henry Weller
7a674dbc07 epsilonWallFunction, omegaWallFunction: Removed unused variabl 2016-08-18 08:23:54 +01:00