Commit graph

248 commits

Author SHA1 Message Date
Henry Weller
f30e7a6721 functionObjects::fieldValue: Added support for 'field' entry
Added patchIntegrate configuration
2016-06-10 10:37:37 +01:00
Henry Weller
6221186311 functionObjects::writeRegisteredObject -> functionObjects::writeObjects
Added configuration file etc/caseDicts/postProcessing/fields/writeObjects
2016-06-10 08:28:13 +01:00
Henry Weller
0c36513c12 createTurbulenceFields: utility replaced by 'turbulenceFields' functionObject used with the '-postProcess' option 2016-06-09 17:17:19 +01:00
Henry Weller
f200a99262 R: utility replaced by functionObject used with the '-postProcess' option 2016-06-09 16:28:30 +01:00
Henry Weller
8eabf85f9a wallShearStress: utility replaced by functionObject used with the '-postProcess' option 2016-06-09 16:05:13 +01:00
Henry Weller
2c61071f99 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-09 14:52:04 +01:00
Henry Weller
d744705ee4 functionObjects::scalarTransport: simplified, standardized, rationalized
tutorials/incompressible/pisoFoam/les/pitzDaily: Added scalarTransport
functionObject to demonstrate the new functionality
2016-06-08 15:11:57 +01:00
Chris Greenshields
ada79530d0 Name of packaged function object consistent with filename
to enable the postProcess -func <function> option to work
2016-06-08 14:16:38 +01:00
Henry Weller
477d40f0a2 etc/bashrc,cshrc: Use "$WM_PROJECT" rather than "OpenFOAM" in the setting of $FOAM_INST_DIR
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2112
2016-06-08 11:51:21 +01:00
Henry Weller
014374fb73 etc/config.*/aliases: Updated, removed duplicates and added foamVersion
foamVersion: prints the current OpenFOAM version
foamVersion <version>: changes to the specified version
2016-06-07 16:15:46 +01:00
Henry Weller
4114a1e2bf etc/bashrc,cshrc: Simplify and automate the setting of FOAM_INST_DIR
FOAM_INST_DIR is the location of the OpenFOAM installation which defaults to
the directory containing the etc/bashrc,cshrc file.  If this default is
not appropriate FOAM_INST_DIR can be set explicitly.
2016-06-06 17:20:10 +01:00
Henry Weller
e8a49d8f5a etc/config.*/unset: Added CGAL-related environment variables 2016-06-05 18:22:28 +01:00
Henry Weller
3a15897def etc/caseDicts/postProcessing: Updated now that #includeFunc handles function arguments 2016-06-01 21:52:07 +01:00
Henry Weller
397fd32561 etc/config.*/paraview: Upgraded to ParaView-5.0.1 2016-05-30 21:27:11 +01:00
Henry Weller
c9bfcc665a etc/config.*: Added support for gcc-6.1 2016-05-29 22:28:07 +01:00
Henry Weller
ab5a6a4984 CGAL: Upgraded to 4.8 2016-05-29 22:27:46 +01:00
Henry Weller
8b672f0f1a postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
Henry Weller
fd52818d3d etc/caseDicts/postProcessing: Updated for recent developments in functionObjects 2016-05-26 16:31:32 +01:00
Henry Weller
53d97b8574 etc/caseDicts/postProcessing/fields: Added 'components' and 'div' 2016-05-26 15:34:15 +01:00
Henry Weller
6ea0cbc9cb etc/caseDicts/postProcessing/fields/Q: Simplified 2016-05-26 15:34:01 +01:00
Henry Weller
f4ecb2ff23 functionObjects::randomise: New functionObject to create a field with a random perturbation 2016-05-26 15:32:10 +01:00
Henry Weller
21773a47b6 etc/config.*/aliases: Renamed aliases to be less SHOUTY and confusing 2016-05-23 18:47:28 +01:00
Henry Weller
f2331a8587 dynamicCode: Renamed 'redirectType' to 'name' to clarify the purpose
of the entry which is to provide the name of the generated class.

'redirectType' is supported for backward-compatibility.
2016-05-18 23:10:42 +01:00
Henry Weller
982ebe6f59 functionObjects::partialWrite: Redundant and removed
the equivalent functionality is provided by the writeRegisteredObject
   functionObject in a MUCH simpler, easier and extensible manner.

functionObject: Removed the now redundant 'timeSet' function.
2016-05-18 12:23:29 +01:00
Henry Weller
38b99504c0 dynamicCode: the "code" entry is now optional
codedFunctionObject: Added the "codeWrite" entry
    for the "write" function for consistency.
    The previous method of using the "code" entry for the "write"
    function was inconsistent and very confusing.
2016-05-18 12:20:03 +01:00
Henry Weller
2768aefa3c dynamicCode/functionObjectTemplate: Updated and simplified by deriving from the regionFunctionObject base-class 2016-05-16 22:23:53 +01:00
Henry Weller
d8c5eb43f7 etc/codeTemplates/functionObject: Updated and simplified using fvMeshFunctionObject as the base-class 2016-05-16 22:16:22 +01:00
Henry Weller
18725ed3ac functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
Henry Weller
a5ed7f57fc etc/codeTemplates/functionObject: Updated to correspond to the new functionObject structure 2016-05-15 21:47:18 +01:00
Henry Weller
855ce5b735 Updates to script documentation
Patch contributed by Bruno Santos
Resolves text report http://bugs.openfoam.org/view.php?id=2089
2016-05-15 18:12:26 +01:00
Henry Weller
91aba2db2e functionObjects: rewritten to all be derived from 'functionObject'
- Avoids the need for the 'OutputFilterFunctionObject' wrapper
  - Time-control for execution and writing is now provided by the
    'timeControlFunctionObject' which instantiates the processing
    'functionObject' and controls its operation.
  - Alternative time-control functionObjects can now be written and
    selected at run-time without the need to compile wrapped version of
    EVERY existing functionObject which would have been required in the
    old structure.
  - The separation of 'execute' and 'write' functions is now formalized in the
    'functionObject' base-class and all derived classes implement the
    two functions.
  - Unnecessary implementations of functions with appropriate defaults
    in the 'functionObject' base-class have been removed reducing
    clutter and simplifying implementation of new functionObjects.
  - The 'coded' 'functionObject' has also been updated, simplified and tested.
  - Further simplification is now possible by creating some general
    intermediate classes derived from 'functionObject'.
2016-05-15 16:40:01 +01:00
Henry Weller
758dfc2c1f Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
Henry Weller
71290b4d9e functionObjects: Changed options 'outputControl' -> 'writeControl' and 'outputInterval' -> 'writeInterval'
for consistency with the time controls in controlDict and to avoid
unnecessary confusion.  All code and tutorials have been updated.

The old names 'outputControl' and 'outputInterval' are but supported for
backward compatibility but deprecated.
2016-05-12 11:38:11 +01:00
Henry Weller
3d05ea5bc4 etc/config.sh/metis: Added $WM_PRECISION_OPTION to support SP
etc/config.sh/scotch: Added $WM_PRECISION_OPTION for consistency
2016-05-11 14:39:28 +01:00
Henry Weller
dbae6e80ae etc/config.*/settings: Remove unnecessary $WM_COMPILE_OPTION from $FOAM_EXT_LIBBIN
Simplified the directory structure in ThirdParty-dev/platforms
2016-05-11 14:37:07 +01:00
Henry Weller
901f6cde1d functionObjects: Removed the redundant "viable" member function
Construction failure and recovery is not handled with exceptions in functionObjectList
2016-05-11 12:57:17 +01:00
Henry Weller
8663237a0f src/postProcessing/functionObjects: Removed unused IOOutputFilter clutter 2016-05-10 12:54:42 +01:00
Henry Weller
1caf470b79 etc/config.sh/metis: Updated for changes to ThirdParty-dev/Allwmake
See commit b627924a4bf104521b567d3aa3dc80c864325b1a

    Allwmake: Added scripted changes for REALTYPEWIDTH and IDXTYPEWIDTH
    Patch contributed by Bruno Santos
    Resolves bug-report http://bugs.openfoam.org/view.php?id=2085
2016-05-10 11:39:51 +01:00
Henry Weller
5f95885a1a setConstraintTypes: Provide a "value" entry for ACMI
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2083
2016-05-06 14:09:44 +01:00
Henry Weller
6dfb01dc1f etc/config.*/unset: Updated for changes in foamOldDirs
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2031
2016-05-05 23:37:33 +01:00
Henry Weller
72572b64c6 etc/cshrc: Removed continuation lines from $foamOldDirs 2016-05-05 23:36:35 +01:00
Henry Weller
9bb3351cdc etc/config.csh: Capitalized comments 2016-05-05 15:52:05 +01:00
Henry Weller
f7e4137ee5 etc/bashrc, etc/cshrc: Filter $WM_PROJECT_DIR from paths rather than $FOAM_INST_DIR
Additionally filter $ParaView_DIR from paths in config.sh/paraview and config.csh/paraview

Resolves bug-report http://bugs.openfoam.org/view.php?id=2031
2016-05-05 15:37:00 +01:00
Henry Weller
5822320b8d Building foamyHexMesh is now optional defaulting to not build
Set the environment variable "FOAMY_HEX_MESH" to build foamyHexMesh,
e.g. in ~/.OpenFOAM/dev/prefs.sh

FOAMY_HEX_MESH=yes
2016-05-02 18:21:45 +01:00
Henry Weller
3cd9b4f5d7 Change field loop index from "fieldI" to "fieldi" 2016-05-02 18:20:48 +01:00
Henry Weller
f83975a701 functionObjects: Moved into the functionObjects namespace and rationalized and simplified failable construction
Rather than requiring each functionObject to handle failed construction
internally (using the active_ flag) the static member function "viable"
is provided which returns true if construction of the functionObject is
likely to be successful.  Failed construction is then handled by the
wrapper-class which constructs the functionObject,
e.g. "OutputFilterFunctionObject".
2016-05-02 16:28:24 +01:00
Henry Weller
a25a449c9e GeometricField: Rationalized and simplified access to the dimensioned internal field
Given that the type of the dimensioned internal field is encapsulated in
the GeometricField class the name need not include "Field"; the type
name is "Internal" so

volScalarField::DimensionedInternalField -> volScalarField::Internal

In addition to the ".dimensionedInternalField()" access function the
simpler "()" de-reference operator is also provided to greatly simplify
FV equation source term expressions which need not evaluate boundary
conditions.  To demonstrate this kEpsilon.C has been updated to use
dimensioned internal field expressions in the k and epsilon equation
source terms.
2016-04-27 21:32:45 +01:00
Henry Weller
c7179bd0d0 Updated handling of the ParaView installation path
Patch contributed by Bruno Santos
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2034
2016-03-30 19:26:01 +01:00
Chris Greenshields
59f7f1ef0e foamNewFunctionObject: script to create template code for a new function object
Run foamNewFunctionObject -h for details
2016-03-22 17:40:03 +00:00
Henry Weller
b8031d592b etc/codeTemplates/BC: Use Use 'Zero' rather than 'pTraits<Type>::zero' to initialize to 0 2016-03-22 08:33:16 +00:00