Commit graph

64 commits

Author SHA1 Message Date
Henry Weller
017903cb85 Remove/replace deprecated functions and classes 2016-06-20 09:39:02 +01:00
Henry Weller
8a5304edf6 Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
Henry Weller
2668106e2c cyclicACMIPolyPatch: Clear geometry when resetting
Patch contributed by Mattijs Janssens
2016-06-17 11:50:56 +01:00
Henry Weller
7b75d81269 Rationalized Doxygen documentation of command-line options 2016-06-17 09:11:58 +01:00
Henry Weller
19ef39741b Simplify and correct Doxygen lists using '-' rather than '\li \c' 2016-06-16 20:10:39 +01:00
Henry Weller
0b3b466490 Removed experimental code 2016-06-12 21:11:55 +01:00
Henry Weller
1d7e1a7ad5 functionObjects: renamed faceSource -> surfaceRegion, cellSource -> volRegion
The use of the term 'source' in the context of post-processing is
confusing and does not properly describe the process of region
selection.  The new names 'surfaceRegion' and 'volRegion' better
describe the purpose of the functionObjects which is to provide field
processing functionality limited to a specified region of space, either
a surface or volume.

The keyword 'source' is renamed 'regionType' which better describes the
purpose which is to specify the method by which the surface or volume
region is selected.

The keyword to select the name of the surface or volume region is
renamed from 'sourceName' to 'name' consistent with the other
name-changes above.
2016-06-12 20:56:51 +01:00
Henry Weller
706ec804fd Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
Henry Weller
b426585d25 Updated header 2016-05-30 08:31:21 +01:00
Henry Weller
691e7186b4 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
Henry Weller
e34763b392 Added forward declaration of friend functions 2016-05-30 08:28:35 +01:00
Henry Weller
3980082fe2 Added forward declaration of friend functions 2016-05-29 22:28:37 +01:00
Henry Weller
2037fc02cf functionObjects, foamCalcFunctions, fvOptions: Standardized keywords for selecting fields and objects
Generally fields and objects are selected using the 'field[s]' and
'object[s]' keywords but this was not consistent between all
functionObject, fvOptions etc. and now fixed by applying the following
renaming:

fieldName -> field
fieldNames -> fields
objectName -> object
objectNames -> objects
2016-05-21 20:15:21 +01:00
Henry Weller
4500971827 Further standardization of loop index naming: pointI -> pointi, patchI -> patchi 2016-05-18 21:20:42 +01:00
Henry Weller
1441f8cab0 Patches contributed by Mattijs Janssens:
splitMeshRegions: handle flipping of faces for surface fields

subsetMesh: subset dimensionedFields

decomposePar: use run-time selection of decomposition constraints. Used to
    keep cells on particular processors. See the decomposeParDict in

$FOAM_UTILITIES/parallel/decomposePar:
  - preserveBaffles: keep baffle faces on same processor
  - preserveFaceZones: keep faceZones owner and neighbour on same processor
  - preservePatches: keep owner and neighbour on same processor. Note: not
    suitable for cyclicAMI since these are not coupled on the patch level
  - singleProcessorFaceSets: keep complete faceSet on a single processor
  - refinementHistory: keep cells originating from a single cell on the
    same processor.

decomposePar: clean up decomposition of refinement data from snappyHexMesh

reconstructPar: reconstruct refinement data (refineHexMesh, snappyHexMesh)

reconstructParMesh: reconstruct refinement data (refineHexMesh, snappyHexMesh)

redistributePar:
  - corrected mapping surfaceFields
  - adding processor patches in order consistent with decomposePar

argList: check that slaves are running same version as master

fvMeshSubset: move to dynamicMesh library

fvMeshDistribute:
  - support for mapping dimensionedFields
  - corrected mapping of surfaceFields

parallel routines: allow parallel running on single processor

Field: support for
  - distributed mapping
  - mapping with flipping

mapDistribute: support for flipping

AMIInterpolation: avoid constructing localPoints
2016-05-15 16:36:48 +01:00
Henry Weller
fe43b80536 GeometricField: Renamed internalField() -> primitiveField() and dimensionedInternalField() -> internalField()
These new names are more consistent and logical because:

primitiveField():
primitiveFieldRef():
    Provides low-level access to the Field<Type> (primitive field)
    without dimension or mesh-consistency checking.  This should only be
    used in the low-level functions where dimensional consistency is
    ensured by careful programming and computational efficiency is
    paramount.

internalField():
internalFieldRef():
    Provides access to the DimensionedField<Type, GeoMesh> of values on
    the internal mesh-type for which the GeometricField is defined and
    supports dimension and checking and mesh-consistency checking.
2016-04-30 21:40:09 +01:00
Henry Weller
a8bf4be58a Standardized cell, patch, face and processor loop index names 2016-04-25 12:00:53 +01:00
Henry Weller
8c4f6b8fcb Standardized cell, patch and face loop index names 2016-04-25 10:28:32 +01:00
Henry Weller
287603474a vector::zero -> Zero 2016-04-16 18:34:41 +01:00
Henry Weller
ac71f86574 UList: Rationalize assignment (shallow-copy vs deep-copy)
//- Disallow default shallow-copy assignment
    //
    //  Assignment of UList<T> may need to be either shallow (copy pointer)
    //  or deep (copy elements) depending on context or the particular type
    //  of list derived from UList and it is confusing and prone to error
    //  for the default assignment to be either.  The solution is to
    //  disallow default assignment and provide separate 'shallowCopy' and
    //  'deepCopy' member functions.
    void operator=(const UList<T>&) = delete;

    //- Copy the pointer held by the given UList.
    inline void shallowCopy(const UList<T>&);

    //- Copy elements of the given UList.
    void deepCopy(const UList<T>&);
2016-04-03 10:26:05 +01:00
Henry Weller
56668b2406 Pstream: optimisation of data exchange
Contributed by Mattijs Janssens.

1. Any non-blocking data exchange needs to know in advance the sizes to
   receive so it can size the buffer.  For "halo" exchanges this is not
   a problem since the sizes are known in advance but or all other data
   exchanges these sizes need to be exchanged in advance.

   This was previously done by having all processors send the sizes of data to
   send to the master and send it back such that all processors
   - had the same information
   - all could work out who was sending what to where and hence what needed to
     be received.

   This is now changed such that we only send the size to the
   destination processor (instead of to all as previously). This means
   that
   - the list of sizes to send is now of size nProcs v.s. nProcs*nProcs before
   - we cut out the route to the master and back by using a native MPI
     call

   It causes a small change to the API of exchange and PstreamBuffers -
   they now return the sizes of the local buffers only (a labelList) and
   not the sizes of the buffers on all processors (labelListList)

2. Reversing the order of the way in which the sending is done when
   scattering information from the master processor to the other
   processors. This is done in a tree like fashion. Each processor has a
   set of processors to receive from/ send to. When receiving it will
   first receive from the processors with the least amount of
   sub-processors (i.e. the ones which return first). When sending it
   needs to do the opposite: start sending to the processor with the
   most amount of sub-tree since this is the critical path.
2016-04-02 18:32:11 +01:00
Henry Weller
bb390f474f faceZoneToCell: Corrected cell selection logic
Patch contributed by Mattijs Janssens
Resolved bug-report http://www.openfoam.org/mantisbt/view.php?id=2038
2016-04-01 16:59:51 +01:00
Henry Weller
fa8929df6d Use Zero rather than pTraits<Type>::zero unless a static typed '0' is required 2016-03-22 17:46:52 +00:00
Henry Weller
7037737d03 Updated Doxygen documentation and files
Contributed by Bruno Santos
Resolves patch report http://www.openfoam.org/mantisbt/view.php?id=2023

Update online documentation http://openfoam.github.io/Documentation-dev/html/
2016-03-14 11:00:24 +00:00
Henry Weller
c544bec896 Removed duplicate, inconsistent and spurious comments in .C files 2016-02-29 18:33:54 +00:00
Henry Weller
99c000fc94 Rationalized the indentation of C-preprocessor directives 2016-02-29 15:42:03 +00:00
Henry Weller
7859083246 OpenFOAM: Updated all libraries, solvers and utilities to use the new const-safe tmp
The deprecated non-const tmp functionality is now on the compiler switch
NON_CONST_TMP which can be enabled by adding -DNON_CONST_TMP to EXE_INC
in the Make/options file.  However, it is recommended to upgrade all
code to the new safer tmp by using the '.ref()' member function rather
than the non-const '()' dereference operator when non-const access to
the temporary object is required.

Please report any problems on Mantis.

Henry G. Weller
CFD Direct.
2016-02-26 17:31:28 +00:00
Henry Weller
49c54e9070 OpenFOAM libraries: Updated to use the new const-safe tmp 2016-02-26 08:13:59 +00:00
Henry Weller
3a56ebf33d tmp: Improved reference count checks to provide better error diagnostics
in case of tmp misuse.

Simplified tmp reuse pattern in field algebra to use tmp copy and
assignment rather than the complex delayed call to 'ptr()'.

Removed support for unused non-const 'REF' storage of non-tmp objects due to C++
limitation in constructor overloading: if both tmp(T&) and tmp(const T&)
constructors are provided resolution is ambiguous.

The turbulence libraries have been upgraded and '-DCONST_TMP' option
specified in the 'options' file to switch to the new 'tmp' behavior.
2016-02-24 12:47:36 +00:00
Henry Weller
d84325d5af coordinateSystems/coordinateRotation: Corrected e1, e2 and e3 and updated documentation
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1982
2016-01-29 09:56:59 +00:00
Henry Weller
79f0c385ca Info -> InfoInFunction and updated comments 2016-01-20 17:51:15 +00:00
Henry Weller
a23f79fa7e Info -> InfoInFunction and updated comments 2016-01-20 16:21:37 +00:00
Henry Weller
a56ab5f863 Consistently indent continuation backslashes in macro definitions 2016-01-11 13:00:56 +00:00
Henry Weller
94c05a1e6c Update code to use the simpler C++11 template syntax removing spaces between closing ">"s 2016-01-10 22:41:16 +00:00
Henry Weller
36f2d69888 Update code to use the simpler C++11 template syntax 2016-01-10 19:20:16 +00:00
Henry Weller
d870ca5be5 Corrected typo: Tranform -> Transform
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1923
2015-11-22 17:27:44 +00:00
Henry Weller
5e6a7ea282 Completed update ...ErrorIn -> ...ErrorInFunction
Avoids the clutter and maintenance effort associated with providing the
function signature string.
2015-11-11 09:03:39 +00:00
Henry Weller
03494fef5d Updated notImplemented -> NotImplemented
The new NotImplemented macro uses __PRETTY_FUNCTION__ for GNU compatible
compilers otherwise __func__ to provide the function name string.
2015-11-01 10:26:37 +00:00
Henry Weller
cbd3f823e5 cyclicACMIPolyPatch: remove tolerance from the ACMI interpolation
Maybe resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1335
awaiting feedback from reporter.
2015-10-24 21:39:10 +01:00
Henry Weller
7595f4c225 cyclicAMIPolyPatch: corrected rotationAngle signs in parallel decomposition of cyclicAMI
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1726
2015-10-23 08:31:11 +01:00
Henry Weller
c9e4d5c135 cyclicAMIPolyPatch, cyclicACMIPolyPatch: Ensure geometry is updated correctly following mesh-motion
Resolves bug-report: http://www.openfoam.org/mantisbt/view.php?id=1664
2015-10-22 09:48:40 +01:00
Henry Weller
b0eda7bc4e Updated headers 2015-09-02 15:30:10 +01:00
Henry Weller
689b0a00fc Added ROOTSMALL 2015-09-02 15:29:54 +01:00
Henry Weller
24495c009c Rename localAxesRotation -> cylindrical
This class does not simply rotate the coordinate system is also changes
it from Cartesian to cylindrical which is not clear from the original name.

We plan to rewrite the coordinateRotation classes to be
coordinateTransformation classes and massively simplify the interface
from the currently unintelligible mess.
2015-08-13 09:25:28 +01:00
Henry Weller
d6e6e2bf70 Remove unnecessary use of keyword "explicit" 2015-07-17 18:26:58 +01:00
Henry Weller
77bf182edc Resolved issues with virtual function inheritance and warning from clang
Also removed __GNUC__ conditional compilation statements which are no
longer needed.
2015-07-17 12:11:37 +01:00
Henry Weller
fd457786ef surfaceToCell, surfaceToPoint: Add surface file name expansion
Resolves feature-request http://www.openfoam.org/mantisbt/view.php?id=1754
2015-06-19 15:49:10 +01:00
Henry
c54cc16017 cyclicAMIPolyPatch: Correct report of sweep angle
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1716
2015-05-28 16:29:06 +01:00
Henry
fee9b188f6 cyclicAMIPolyPatch: Correct particle transformations across cyclic AMI patches
Patch provided by Daniel Jasiński
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1694
2015-05-20 12:44:31 +01:00
Henry
65152a3109 AMIMethod: Corrected type of tgtPatch_
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1669
2015-04-27 11:10:15 +01:00