/*---------------------------------------------------------------------------*\ ========= | \\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / O peration | \\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation \\/ M anipulation | ------------------------------------------------------------------------------- License This file is part of OpenFOAM. OpenFOAM is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. OpenFOAM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with OpenFOAM. If not, see . Class Foam::mapDistribute Description Class containing processor-to-processor mapping information. We store mapping from the bits-to-send to the complete starting list (subXXXMap) and from the received bits to their location in the new list (constructXXXMap). Note: Schedule is a list of processor pairs (one send, one receive. One of them will be myself) which forms a scheduled (i.e. non-buffered) exchange. See distribute on how to use it. Note2: number of items sent on one processor have to equal the number of items received on the other processor. To aid constructing these maps there are the constructors from global numbering, either with or without transforms. - without transforms: Constructors using compact numbering: layout is - all my own elements first (whether used or not) - followed by used-only remote elements sorted by remote processor. So e.g 4 procs and on proc 1 the compact table will first have all globalIndex.localSize() elements from proc1 followed by used-only elements of proc0, proc2, proc3. The constructed mapDistribute sends the local elements from and receives the remote elements into their compact position. compactMap[procI] is the position of elements from procI in the compact map. compactMap[myProcNo()] is empty since trivial addressing. It rewrites the input global indices into indices into the constructed data. - with transforms: This requires the precalculated set of possible transforms (globalIndexAndTransform). These are given as permutations (+, -, or none) of up to 3 independent transforms. The layout of the data is - all my own elements first (whether used or not) - followed by used-only remote elements sorted by remote processor. - followed by - for each transformation index - the set of local or remote elements with that transformation. The inputs for the constructor are - the set of untransformed local or remote indices in globalIndex numbering. These get rewritten to be indices into the layout of the data. - the set of transformed local or remote indices in globalIndexAndTransform encoding. These are labelPairs. Any distribute with transforms is now done as: 1. exchange data with other processors and receive these into the slots for that processor 2. for all transformations transform a subset of the data according to transformElements_[transformI] and store this starting from transformStart_[transformI] In the same way a reverse distribute will 1. apply the inverse transform to the data starting at transformStart_[transformI] and copy the result back into the transformElements_[transformI]. These might be local or remote slots. 2. the data in the remote slots will now be sent back to the correct location in the originating processor. E.g. a map to handle - mesh points on a mesh with - 1 cyclic so 3 permutations (+,-,none) will have layout - on e.g. processor 1 out of 2: +------+ <- transformStart[2] | | | | <- transform2 applied to data in local or remote slots | | +------+ <- transformStart[1] | | | | <- transform1 applied to data in local or remote slots | | +------+ <- transformStart[1] | | | | <- transform0 applied to data in local or remote slots | | +------+ <- transformStart[0] | | | | <- data from proc2 | | +------+ | | | | <- data from proc0 | | +------+ <- mesh.nPoints() | | | | | | +------+ 0 SourceFiles mapDistribute.C mapDistributeTemplates.C \*---------------------------------------------------------------------------*/ #ifndef mapDistribute_H #define mapDistribute_H #include "transformList.H" #include "labelList.H" #include "labelPair.H" #include "Pstream.H" #include "boolList.H" #include "Map.H" #include "vectorTensorTransform.H" #include "coupledPolyPatch.H" // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // namespace Foam { class mapPolyMesh; class globalIndex; class PstreamBuffers; class globalIndexAndTransform; /*---------------------------------------------------------------------------*\ Class mapDistribute Declaration \*---------------------------------------------------------------------------*/ class mapDistribute { // Private data //- Size of reconstructed data label constructSize_; //- Maps from subsetted data back to original data labelListList subMap_; //- Maps from subsetted data to new reconstructed data labelListList constructMap_; // Optional transformation //- For every globalIndexAndTransform::transformPermutations // gives the elements that need to be transformed labelListList transformElements_; //- Destination in constructMap for transformed elements labelList transformStart_; //- Schedule mutable autoPtr> schedulePtr_; // Private Member Functions static void checkReceivedSize ( const label procI, const label expectedSize, const label receivedSize ); //- Construct per processor compact addressing of the global elements // needed. The ones from the local processor are not included since // these are always all needed. void calcCompactAddressing ( const globalIndex& globalNumbering, const labelList& elements, List>& compactMap ) const; void calcCompactAddressing ( const globalIndex& globalNumbering, const labelListList& elements, List>& compactMap ) const; void exchangeAddressing ( const int tag, const globalIndex& globalNumbering, labelList& elements, List>& compactMap, labelList& compactStart ); void exchangeAddressing ( const int tag, const globalIndex& globalNumbering, labelListList& elements, List>& compactMap, labelList& compactStart ); //- Helper function: copy transformElements without transformation template void applyDummyTransforms(List& field) const; template void applyTransforms ( const globalIndexAndTransform& globalTransforms, List& field, const TransformOp& top ) const; //- Helper function: copy transformElements without transformation template void applyDummyInverseTransforms(List& field) const; template void applyInverseTransforms ( const globalIndexAndTransform& globalTransforms, List& field, const TransformOp& top ) const; public: // Public classes //- Default transformation behaviour class transform { public: template void operator() ( const vectorTensorTransform& vt, const bool forward, List& fld ) const { const tensor T(forward ? vt.R() : vt.R().T()); transformList(T, fld); } template void operator() ( const vectorTensorTransform& vt, const bool forward, List>& flds ) const { forAll(flds, i) { operator()(vt, forward, flds[i]); } } //- Transform patch-based field template void operator()(const coupledPolyPatch& cpp, UList& fld) const { if (!cpp.parallel()) { transformList(cpp.forwardT(), fld); } } //- Transform sparse field template class Container> void operator()(const coupledPolyPatch& cpp, Container& map) const { if (!cpp.parallel()) { transformList(cpp.forwardT(), map); } } }; //- Default transformation behaviour for position class transformPosition { public: void operator() ( const vectorTensorTransform& vt, const bool forward, List& fld ) const { pointField pfld(fld.xfer()); if (forward) { fld = vt.transformPosition(pfld); } else { fld = vt.invTransformPosition(pfld); } } void operator() ( const vectorTensorTransform& vt, const bool forward, List>& flds ) const { forAll(flds, i) { operator()(vt, forward, flds[i]); } } //- Transform patch-based field void operator()(const coupledPolyPatch& cpp, pointField& fld) const { cpp.transformPosition(fld); } template class Container> void operator()(const coupledPolyPatch& cpp, Container& map) const { Field fld(map.size()); label i = 0; forAllConstIter(typename Container, map, iter) { fld[i++] = iter(); } cpp.transformPosition(fld); i = 0; forAllIter(typename Container, map, iter) { iter() = fld[i++]; } } }; // Declare name of the class and its debug switch ClassName("mapDistribute"); // Constructors //- Construct null mapDistribute(); //- Construct from components mapDistribute ( const label constructSize, const Xfer& subMap, const Xfer& constructMap ); //- Construct from components mapDistribute ( const label constructSize, const Xfer& subMap, const Xfer& constructMap, const Xfer& transformElements, const Xfer& transformStart ); //- Construct from reverse addressing: per data item the send // processor and the receive processor. (note: data is not stored // sorted per processor so cannot use printLayout). mapDistribute ( const labelList& sendProcs, const labelList& recvProcs ); //- Construct from list of (possibly) remote elements in globalIndex // numbering (or -1). Determines compact numbering (see above) and // distribute map to get data into this ordering and renumbers the // elements to be in compact numbering. mapDistribute ( const globalIndex&, labelList& elements, List>& compactMap, const int tag = Pstream::msgType() ); //- Special variant that works with the info sorted into bins // according to local indices. E.g. think cellCells where // cellCells[localCellI] is a list of global cells mapDistribute ( const globalIndex&, labelListList& cellCells, List>& compactMap, const int tag = Pstream::msgType() ); //- Construct from list of (possibly remote) untransformed elements // in globalIndex numbering (or -1) and (possibly remote) // transformded elements in globalIndexAndTransform numbering. // Determines compact numbering (see above) and // distribute map to get data into this ordering and renumbers the // elements to be in compact numbering. mapDistribute ( const globalIndex&, labelList& untransformedElements, const globalIndexAndTransform&, const labelPairList& transformedElements, labelList& transformedIndices, List>& compactMap, const int tag = Pstream::msgType() ); //- As above but with ListLists. mapDistribute ( const globalIndex&, labelListList& cellCells, const globalIndexAndTransform&, const List& transformedElements, labelListList& transformedIndices, List>& compactMap, const int tag = Pstream::msgType() ); //- Construct by transferring parameter content mapDistribute(const Xfer&); //- Construct copy mapDistribute(const mapDistribute&); // Member Functions // Access //- Constructed data size label constructSize() const { return constructSize_; } //- Constructed data size label& constructSize() { return constructSize_; } //- From subsetted data back to original data const labelListList& subMap() const { return subMap_; } //- From subsetted data back to original data labelListList& subMap() { return subMap_; } //- From subsetted data to new reconstructed data const labelListList& constructMap() const { return constructMap_; } //- From subsetted data to new reconstructed data labelListList& constructMap() { return constructMap_; } //- For every globalIndexAndTransform::transformPermutations // gives the elements that need to be transformed const labelListList& transformElements() const { return transformElements_; } //- Destination in constructMap for transformed elements const labelList& transformStart() const { return transformStart_; } //- Find transform from transformElements label whichTransform(const label index) const; //- Calculate a schedule. See above. static List schedule ( const labelListList& subMap, const labelListList& constructMap, const int tag ); //- Return a schedule. Demand driven. See above. const List& schedule() const; // Other //- Transfer the contents of the argument and annul the argument. void transfer(mapDistribute&); //- Transfer contents to the Xfer container Xfer xfer(); //- Helper for construct from globalIndex. Renumbers element // (in globalIndex numbering) into compact indices. static label renumber ( const globalIndex&, const List>& compactMap, const label globalElement ); //- Compact maps. Gets per field a bool whether it is used (locally) // and works out itself what this side and sender side can remove // from maps. void compact ( const boolList& elemIsUsed, const int tag = UPstream::msgType() ); //- Distribute data. Note:schedule only used for Pstream::scheduled // for now, all others just use send-to-all, receive-from-all. template static void distribute ( const Pstream::commsTypes commsType, const List& schedule, const label constructSize, const labelListList& subMap, const labelListList& constructMap, List&, const int tag = UPstream::msgType() ); //- Distribute data. If multiple processors writing to same // position adds contributions using cop. template static void distribute ( const Pstream::commsTypes commsType, const List& schedule, const label constructSize, const labelListList& subMap, const labelListList& constructMap, List&, const CombineOp& cop, const T& nullValue, const int tag = UPstream::msgType() ); //- Distribute data using default commsType. template void distribute ( DynamicList& fld, const bool dummyTransform = true, const int tag = UPstream::msgType() ) const; //- Distribute data using default commsType. template void distribute ( List& fld, const bool dummyTransform = true, const int tag = UPstream::msgType() ) const; //- Same but with transforms template void distribute ( const globalIndexAndTransform&, List& fld, const TransformOp& top, const int tag = UPstream::msgType() ) const; //- Reverse distribute data using default commsType. template void reverseDistribute ( const label constructSize, List&, const bool dummyTransform = true, const int tag = UPstream::msgType() ) const; //- Same but with transforms template void reverseDistribute ( const globalIndexAndTransform&, const label constructSize, List& fld, const TransformOp& top, const int tag = UPstream::msgType() ) const; //- Reverse distribute data using default commsType. // Since constructSize might be larger than supplied size supply // a nullValue template void reverseDistribute ( const label constructSize, const T& nullValue, List& fld, const bool dummyTransform = true, const int tag = UPstream::msgType() ) const; //- Same but with transforms template void reverseDistribute ( const globalIndexAndTransform&, const label constructSize, const T& nullValue, List& fld, const TransformOp& top, const int tag = UPstream::msgType() ) const; //- Do all sends using PstreamBuffers template void send(PstreamBuffers&, const List&) const; //- Do all receives using PstreamBuffers template void receive(PstreamBuffers&, List&) const; //- Debug: print layout. Can only be used on maps with sorted // storage (local data first, then non-local data) void printLayout(Ostream& os) const; //- Correct for topo change. void updateMesh(const mapPolyMesh&) { NotImplemented; } // Member Operators void operator=(const mapDistribute&); // IOstream operators //- Read dictionary from Istream friend Istream& operator>>(Istream&, mapDistribute&); //- Write dictionary to Ostream friend Ostream& operator<<(Ostream&, const mapDistribute&); }; template<> void mapDistribute::transform::operator() ( const vectorTensorTransform&, const bool, List